RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
NIPBL-206ENST00000509429 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
NIPBL-206ENST00000509429 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
NIPBL-206ENST00000509429 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
NIPBL-206ENST00000509429 FGFR3P22607 806 aa8.8□□□□□ -1
NIPBL-206ENST00000509429 CYLDQ9NQC7 956 aa8.8□□□□□ -1
NIPBL-206ENST00000509429 NLRP3Q96P20 1036 aa8.79□□□□□ -1
NIPBL-206ENST00000509429 GPAMQ9HCL2 828 aa8.79□□□□□ -1
NIPBL-206ENST00000509429 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
NIPBL-206ENST00000509429 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
NIPBL-206ENST00000509429 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-206ENST00000509429 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-206ENST00000509429 NUTM2DQ5VT03 806 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-206ENST00000509429 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-206ENST00000509429 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
NIPBL-206ENST00000509429 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
NIPBL-206ENST00000509429 NACC1Q96RE7 527 aa8.76□□□□□ -1.01
NIPBL-206ENST00000509429 OCSTAMPQ9BR26 566 aa8.76□□□□□ -1.01
NIPBL-206ENST00000509429 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
NIPBL-206ENST00000509429 PTK2Q05397 1052 aa8.75□□□□□ -1.01
NIPBL-206ENST00000509429 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
NIPBL-206ENST00000509429 NDFIP2Q9NV92 336 aa8.75□□□□□ -1.01
NIPBL-206ENST00000509429 ESPNB1AK53 854 aa8.73□□□□□ -1.01
NIPBL-206ENST00000509429 BNIP3LO60238 219 aa8.73□□□□□ -1.01
NIPBL-206ENST00000509429 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
NIPBL-206ENST00000509429 ZC3H4Q9UPT8 1303 aaKnown RBP8.73□□□□□ -1.01
NIPBL-206ENST00000509429 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 ADH6P28332 368 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-206ENST00000509429 PGBD3Q8N328 593 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 RNF112Q9ULX5 631 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
NIPBL-206ENST00000509429 IRAK1P51617 712 aa8.71□□□□□ -1.02
NIPBL-206ENST00000509429 CLN3Q13286 438 aa8.71□□□□□ -1.02
NIPBL-206ENST00000509429 QPCTQ16769 361 aa8.71□□□□□ -1.02
NIPBL-206ENST00000509429 EFHC2Q5JST6 749 aa8.71□□□□□ -1.02
NIPBL-206ENST00000509429 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
NIPBL-206ENST00000509429 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
NIPBL-206ENST00000509429 LILRB3O75022 631 aa8.69□□□□□ -1.02
NIPBL-206ENST00000509429 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
NIPBL-206ENST00000509429 RUBCNLQ9H714 662 aa8.69□□□□□ -1.02
NIPBL-206ENST00000509429 KLF15Q9UIH9 416 aa8.69□□□□□ -1.02
NIPBL-206ENST00000509429 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
NIPBL-206ENST00000509429 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-206ENST00000509429 AVENQ9NQS1 362 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-206ENST00000509429 TUSC1Q2TAM9 212 aa8.66□□□□□ -1.02
NIPBL-206ENST00000509429 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
NIPBL-206ENST00000509429 PHKA2P46019 1235 aa8.65□□□□□ -1.02
NIPBL-206ENST00000509429 JAG1P78504 1218 aa8.65□□□□□ -1.02
NIPBL-206ENST00000509429 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
NIPBL-206ENST00000509429 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
NIPBL-206ENST00000509429 C9orf172C9J069 976 aa8.63□□□□□ -1.03
NIPBL-206ENST00000509429 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
NIPBL-206ENST00000509429 GRIK4Q16099 956 aa8.63□□□□□ -1.03
NIPBL-206ENST00000509429 RTL5Q5HYW3 569 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-206ENST00000509429 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
NIPBL-206ENST00000509429 MSX1P28360 303 aa8.62□□□□□ -1.03
NIPBL-206ENST00000509429 AMHR2Q16671 573 aa8.61□□□□□ -1.03
NIPBL-206ENST00000509429 FIGNL1Q6PIW4 674 aa8.61□□□□□ -1.03
NIPBL-206ENST00000509429 TP53INP1Q96A56 240 aa8.61□□□□□ -1.03
NIPBL-206ENST00000509429 ERVK-9P63128 1117 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 MBTPS1Q14703 1052 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 CYP2U1Q7Z449 544 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
NIPBL-206ENST00000509429 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
NIPBL-206ENST00000509429 PCDHGC4Q9Y5F7 938 aa8.59□□□□□ -1.03
NIPBL-206ENST00000509429 CRISPLD1Q9H336 500 aa8.58□□□□□ -1.04
NIPBL-206ENST00000509429 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
NIPBL-206ENST00000509429 ALAS2P22557 587 aa8.57□□□□□ -1.04
NIPBL-206ENST00000509429 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-206ENST00000509429 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-206ENST00000509429 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-206ENST00000509429 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
NIPBL-206ENST00000509429 NR6A1Q15406 480 aa8.56□□□□□ -1.04
NIPBL-206ENST00000509429 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
NIPBL-206ENST00000509429 LCE4AQ5TA78 99 aa8.56□□□□□ -1.04
NIPBL-206ENST00000509429 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
NIPBL-206ENST00000509429 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
NIPBL-206ENST00000509429 CENPCQ03188 943 aa8.55□□□□□ -1.04
NIPBL-206ENST00000509429 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
NIPBL-206ENST00000509429 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-206ENST00000509429 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
NIPBL-206ENST00000509429 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
NIPBL-206ENST00000509429 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-206ENST00000509429 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
NIPBL-206ENST00000509429 KRTAP5-3Q6L8H2 238 aa8.54□□□□□ -1.04
NIPBL-206ENST00000509429 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-206ENST00000509429 PRDM6Q9NQX0 595 aa8.54□□□□□ -1.04
NIPBL-206ENST00000509429 DNAAF2Q9NVR5 837 aaKnown RBP8.54□□□□□ -1.04
NIPBL-206ENST00000509429 NRG1Q02297 640 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-206ENST00000509429 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
NIPBL-206ENST00000509429 ESYT1Q9BSJ8 1104 aa8.53□□□□□ -1.04
NIPBL-206ENST00000509429 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-206ENST00000509429 SELPP16109 830 aa8.52□□□□□ -1.05
NIPBL-206ENST00000509429 CD33P20138 364 aa8.52□□□□□ -1.05
NIPBL-206ENST00000509429 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-206ENST00000509429 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms