RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SPOCK3Q9BQ16 436 aa10.86□□□□□ -0.67
TRAPPC13-209ENST00000508304 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC13-209ENST00000508304 CDCA7Q9BWT1 371 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC13-209ENST00000508304 OXCT2Q9BYC2 517 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC13-209ENST00000508304 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 XAGE2Q96GT9 111 aa10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 GPAMQ9HCL2 828 aa10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 SNRKQ9NRH2 765 aa10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 CEP126Q9P2H0 1117 aa10.84□□□□□ -0.67
TRAPPC13-209ENST00000508304 MYCP01106 439 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC13-209ENST00000508304 PROCP04070 461 aa10.83□□□□□ -0.68
TRAPPC13-209ENST00000508304 APBB1O00213 710 aa10.82□□□□□ -0.68
TRAPPC13-209ENST00000508304 PHKA2P46019 1235 aa10.82□□□□□ -0.68
TRAPPC13-209ENST00000508304 LBRQ14739 615 aaKnown RBP10.82□□□□□ -0.68
TRAPPC13-209ENST00000508304 SNRPNP63162 240 aaKnown RBP10.81□□□□□ -0.68
TRAPPC13-209ENST00000508304 KLRG1Q96E93 195 aa10.81□□□□□ -0.68
TRAPPC13-209ENST00000508304 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
TRAPPC13-209ENST00000508304 SHISA8B8ZZ34 492 aa10.8□□□□□ -0.68
TRAPPC13-209ENST00000508304 ADAM23O75077 832 aa10.8□□□□□ -0.68
TRAPPC13-209ENST00000508304 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
TRAPPC13-209ENST00000508304 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC13-209ENST00000508304 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC13-209ENST00000508304 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
TRAPPC13-209ENST00000508304 ESCO1Q5FWF5 840 aa10.78□□□□□ -0.68
TRAPPC13-209ENST00000508304 TMEM214Q6NUQ4 689 aaKnown RBP10.78□□□□□ -0.68
TRAPPC13-209ENST00000508304 GALNT6Q8NCL4 622 aa10.78□□□□□ -0.68
TRAPPC13-209ENST00000508304 GDF2Q9UK05 429 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC13-209ENST00000508304 MSX1P28360 303 aa10.77□□□□□ -0.69
TRAPPC13-209ENST00000508304 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
TRAPPC13-209ENST00000508304 RUBCNLQ9H714 662 aa10.77□□□□□ -0.69
TRAPPC13-209ENST00000508304 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 NDFIP2Q9NV92 336 aa10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 ATXN7L1Q9ULK2 861 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC13-209ENST00000508304 EDARADDQ8WWZ3 215 aa10.75□□□□□ -0.69
TRAPPC13-209ENST00000508304 ETNK1Q9HBU6 452 aa10.75□□□□□ -0.69
TRAPPC13-209ENST00000508304 KRBA1A5PL33 1030 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 C2CD2LO14523 706 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 USP4Q13107 963 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 RHBDD1Q8TEB9 315 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 DOLKQ9UPQ8 538 aa10.74□□□□□ -0.69
TRAPPC13-209ENST00000508304 STAU1O95793 577 aaKnown RBP10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 HOXB4P17483 251 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 COL8A1P27658 744 aa10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 ABHD17AQ96GS6 310 aa10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
TRAPPC13-209ENST00000508304 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
TRAPPC13-209ENST00000508304 BNIP3LO60238 219 aa10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 BMP4P12644 408 aa10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 FGFR3P22607 806 aa10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 TLR1Q15399 786 aa10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 SLCO4C1Q6ZQN7 724 aa10.71□□□□□ -0.69
TRAPPC13-209ENST00000508304 CTBSQ01459 385 aa10.7□□□□□ -0.7
TRAPPC13-209ENST00000508304 IRF5Q13568 498 aa10.7□□□□□ -0.7
TRAPPC13-209ENST00000508304 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
TRAPPC13-209ENST00000508304 RRAGCQ9HB90 399 aa10.7□□□□□ -0.7
TRAPPC13-209ENST00000508304 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
TRAPPC13-209ENST00000508304 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
TRAPPC13-209ENST00000508304 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
TRAPPC13-209ENST00000508304 SCNN1DP51172 638 aa10.68□□□□□ -0.7
TRAPPC13-209ENST00000508304 XP32Q5T750 250 aa10.68□□□□□ -0.7
TRAPPC13-209ENST00000508304 DNAAF2Q9NVR5 837 aaKnown RBP10.68□□□□□ -0.7
TRAPPC13-209ENST00000508304 BAG6P46379 1132 aa10.67□□□□□ -0.7
TRAPPC13-209ENST00000508304 OXLD1Q5BKU9 147 aa10.67□□□□□ -0.7
TRAPPC13-209ENST00000508304 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
TRAPPC13-209ENST00000508304 K7ELQ4 463 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 EPXP11678 715 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 ATP4AP20648 1035 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 PLA2G4AP47712 749 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 FIGNL1Q6PIW4 674 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 TBC1D9Q6ZT07 1266 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 SUV39H2Q9H5I1 410 aa10.66□□□□□ -0.7
TRAPPC13-209ENST00000508304 INHAP05111 366 aa10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 ARAFP10398 606 aa10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 AMPD1P23109 780 aa10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 C1orf216Q8TAB5 229 aa10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 ZCCHC2Q9C0B9 1178 aaKnown RBP10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.7
TRAPPC13-209ENST00000508304 GDF10P55107 478 aa10.64□□□□□ -0.71
TRAPPC13-209ENST00000508304 NLRP8Q86W28 1048 aa10.64□□□□□ -0.71
TRAPPC13-209ENST00000508304 BTBD6Q96KE9 485 aa10.64□□□□□ -0.71
TRAPPC13-209ENST00000508304 PCDHGC4Q9Y5F7 938 aa10.64□□□□□ -0.71
TRAPPC13-209ENST00000508304 GRIN2CQ14957 1233 aa10.63□□□□□ -0.71
TRAPPC13-209ENST00000508304 GNB5O14775 395 aa10.62□□□□□ -0.71
TRAPPC13-209ENST00000508304 DGKGP49619 791 aa10.62□□□□□ -0.71
TRAPPC13-209ENST00000508304 ZNF295-AS1Q8N0V1 137 aa10.62□□□□□ -0.71
TRAPPC13-209ENST00000508304 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
TRAPPC13-209ENST00000508304 HCN2Q9UL51 889 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms