RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 UBE2Q2Q8WVN8 375 aa10.89□□□□□ -0.67
CCDC149-206ENST00000508236 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
CCDC149-206ENST00000508236 TUT1Q9H6E5 874 aaKnown RBP10.89□□□□□ -0.67
CCDC149-206ENST00000508236 DAPK1P53355 1430 aa10.89□□□□□ -0.67
CCDC149-206ENST00000508236 CARMIL2Q6F5E8 1435 aa10.89□□□□□ -0.67
CCDC149-206ENST00000508236 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
CCDC149-206ENST00000508236 VAMP1P23763 118 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 GTF2IP78347 998 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 NUP160Q12769 1436 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 TROQ12816 1431 aaPredicted RBP10.88□□□□□ -0.67
CCDC149-206ENST00000508236 DDX10Q13206 875 aaKnown RBP10.88□□□□□ -0.67
CCDC149-206ENST00000508236 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
CCDC149-206ENST00000508236 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
CCDC149-206ENST00000508236 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 KDM5BQ9UGL1 1544 aa10.88□□□□□ -0.67
CCDC149-206ENST00000508236 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
CCDC149-206ENST00000508236 APLP1P51693 650 aa10.87□□□□□ -0.67
CCDC149-206ENST00000508236 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
CCDC149-206ENST00000508236 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
CCDC149-206ENST00000508236 DZIP3Q86Y13 1208 aaKnown RBP10.87□□□□□ -0.67
CCDC149-206ENST00000508236 GLYCTKQ8IVS8 523 aa10.87□□□□□ -0.67
CCDC149-206ENST00000508236 ANO2Q9NQ90 1003 aa10.87□□□□□ -0.67
CCDC149-206ENST00000508236 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
CCDC149-206ENST00000508236 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
CCDC149-206ENST00000508236 PPP4CP60510 307 aa10.86□□□□□ -0.67
CCDC149-206ENST00000508236 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
CCDC149-206ENST00000508236 ABCC5O15440 1437 aa10.85□□□□□ -0.67
CCDC149-206ENST00000508236 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
CCDC149-206ENST00000508236 MAPK1P28482 360 aa10.85□□□□□ -0.67
CCDC149-206ENST00000508236 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
CCDC149-206ENST00000508236 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
CCDC149-206ENST00000508236 DENND4BO75064 1496 aaPredicted RBP10.85□□□□□ -0.67
CCDC149-206ENST00000508236 EIF5BO60841 1220 aaKnown RBP10.84□□□□□ -0.67
CCDC149-206ENST00000508236 MMP16P51512 607 aa10.84□□□□□ -0.67
CCDC149-206ENST00000508236 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
CCDC149-206ENST00000508236 TPCN2Q8NHX9 752 aa10.84□□□□□ -0.67
CCDC149-206ENST00000508236 ASB16Q96NS5 453 aa10.84□□□□□ -0.67
CCDC149-206ENST00000508236 CROCC2H7BZ55 1655 aa10.84□□□□□ -0.67
CCDC149-206ENST00000508236 TK2O00142 265 aa10.83□□□□□ -0.68
CCDC149-206ENST00000508236 ANP32CO43423 234 aa10.83□□□□□ -0.68
CCDC149-206ENST00000508236 C21orf2O43822 256 aa10.83□□□□□ -0.68
CCDC149-206ENST00000508236 FAM160A2Q8N612 972 aaPredicted RBP10.83□□□□□ -0.68
CCDC149-206ENST00000508236 GTF3C2Q8WUA4 911 aaPredicted RBP10.83□□□□□ -0.68
CCDC149-206ENST00000508236 C8orf37Q96NL8 207 aa10.83□□□□□ -0.68
CCDC149-206ENST00000508236 DCTN4Q9UJW0 460 aa10.83□□□□□ -0.68
CCDC149-206ENST00000508236 ABCA8O94911 1581 aa10.82□□□□□ -0.68
CCDC149-206ENST00000508236 CAMSAP2Q08AD1 1489 aa10.82□□□□□ -0.68
CCDC149-206ENST00000508236 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
CCDC149-206ENST00000508236 TAGLNQ01995 201 aaKnown RBP10.82□□□□□ -0.68
CCDC149-206ENST00000508236 PSME1Q06323 249 aa10.82□□□□□ -0.68
CCDC149-206ENST00000508236 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
CCDC149-206ENST00000508236 PRG4Q92954 1404 aaPredicted RBP10.82□□□□□ -0.68
CCDC149-206ENST00000508236 ADGRL2O95490 1459 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 GPATCH8Q9UKJ3 1502 aaKnown RBP10.81□□□□□ -0.68
CCDC149-206ENST00000508236 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
CCDC149-206ENST00000508236 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
CCDC149-206ENST00000508236 SPSB2Q99619 263 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 SEPT3Q9UH03 358 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 PCDHGA11Q9Y5H2 935 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
CCDC149-206ENST00000508236 KIF14Q15058 1648 aa10.8□□□□□ -0.68
CCDC149-206ENST00000508236 HSP90B1P14625 803 aaKnown RBP10.8□□□□□ -0.68
CCDC149-206ENST00000508236 FKBP4Q02790 459 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCDC149-206ENST00000508236 ECM1Q16610 540 aa10.8□□□□□ -0.68
CCDC149-206ENST00000508236 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
CCDC149-206ENST00000508236 ANKK1Q8NFD2 765 aa10.8□□□□□ -0.68
CCDC149-206ENST00000508236 CARD14Q9BXL6 1004 aa10.8□□□□□ -0.68
CCDC149-206ENST00000508236 DNMT3AQ9Y6K1 912 aaPredicted RBP10.8□□□□□ -0.68
CCDC149-206ENST00000508236 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 LGR5O75473 907 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 SF3B2Q13435 895 aaKnown RBP10.79□□□□□ -0.68
CCDC149-206ENST00000508236 COL19A1Q14993 1142 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 DRC1Q96MC2 740 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-206ENST00000508236 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
CCDC149-206ENST00000508236 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-206ENST00000508236 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
CCDC149-206ENST00000508236 RPRD2Q5VT52 1461 aaKnown RBP10.79□□□□□ -0.68
CCDC149-206ENST00000508236 MAGEB6P1A0A0J9YX57 407 aa10.78□□□□□ -0.68
CCDC149-206ENST00000508236 SOWAHBA6NEL2 793 aa10.78□□□□□ -0.68
CCDC149-206ENST00000508236 RECKO95980 971 aa10.78□□□□□ -0.68
CCDC149-206ENST00000508236 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
CCDC149-206ENST00000508236 SREK1Q8WXA9 508 aaKnown RBP10.78□□□□□ -0.68
CCDC149-206ENST00000508236 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
CCDC149-206ENST00000508236 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
CCDC149-206ENST00000508236 PLEKHD1A6NEE1 506 aa10.77□□□□□ -0.69
CCDC149-206ENST00000508236 WEE1P30291 646 aa10.77□□□□□ -0.69
CCDC149-206ENST00000508236 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
CCDC149-206ENST00000508236 USP4Q13107 963 aa10.77□□□□□ -0.69
CCDC149-206ENST00000508236 SH3RF1Q7Z6J0 888 aa10.77□□□□□ -0.69
CCDC149-206ENST00000508236 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.69
CCDC149-206ENST00000508236 NCOA1Q15788 1441 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms