RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
HMGCR-206ENST00000508070 ATG3Q9NT62 314 aa10.93□□□□□ -0.66
HMGCR-206ENST00000508070 CCDC87Q9NVE4 849 aa10.93□□□□□ -0.66
HMGCR-206ENST00000508070 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
HMGCR-206ENST00000508070 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
HMGCR-206ENST00000508070 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
HMGCR-206ENST00000508070 GOLGB1Q14789 3259 aaKnown RBP10.92□□□□□ -0.66
HMGCR-206ENST00000508070 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
HMGCR-206ENST00000508070 ERVV-2B6SEH9 535 aa10.91□□□□□ -0.66
HMGCR-206ENST00000508070 FCHSD2O94868 740 aa10.91□□□□□ -0.66
HMGCR-206ENST00000508070 RBM46Q8TBY0 533 aaKnown RBP10.91□□□□□ -0.66
HMGCR-206ENST00000508070 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
HMGCR-206ENST00000508070 ITGB4P16144 1822 aa10.91□□□□□ -0.66
HMGCR-206ENST00000508070 PXDNLA1KZ92 1463 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
HMGCR-206ENST00000508070 DPEP1P16444 411 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 RFC4P35249 363 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 NMRK2Q9NPI5 230 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 POLKQ9UBT6 870 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 PARP3Q9Y6F1 533 aa10.9□□□□□ -0.66
HMGCR-206ENST00000508070 TOGARAM1Q9Y4F4 1720 aa10.89□□□□□ -0.67
HMGCR-206ENST00000508070 MAP2P11137 1827 aaKnown RBP10.89□□□□□ -0.67
HMGCR-206ENST00000508070 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
HMGCR-206ENST00000508070 GYS1P13807 737 aa10.89□□□□□ -0.67
HMGCR-206ENST00000508070 FSTL1Q12841 308 aa10.89□□□□□ -0.67
HMGCR-206ENST00000508070 C16orf71Q8IYS4 520 aaPredicted RBP10.89□□□□□ -0.67
HMGCR-206ENST00000508070 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
HMGCR-206ENST00000508070 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
HMGCR-206ENST00000508070 PLEKHG2Q9H7P9 1386 aa10.89□□□□□ -0.67
HMGCR-206ENST00000508070 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 KCNA3P22001 575 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 C9orf131Q5VYM1 1079 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 PKD1L3Q7Z443 1732 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 DCAF5Q96JK2 942 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 SLC4A9Q96Q91 983 aa10.88□□□□□ -0.67
HMGCR-206ENST00000508070 C10orf71Q711Q0 1435 aa10.87□□□□□ -0.67
HMGCR-206ENST00000508070 CABP4P57796 275 aa10.87□□□□□ -0.67
HMGCR-206ENST00000508070 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
HMGCR-206ENST00000508070 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
HMGCR-206ENST00000508070 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
HMGCR-206ENST00000508070 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
HMGCR-206ENST00000508070 KDM2BQ8NHM5 1336 aa10.86□□□□□ -0.67
HMGCR-206ENST00000508070 EIF4A2Q14240 407 aaKnown RBP10.86□□□□□ -0.67
HMGCR-206ENST00000508070 KDRP35968 1356 aa10.86□□□□□ -0.67
HMGCR-206ENST00000508070 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
HMGCR-206ENST00000508070 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
HMGCR-206ENST00000508070 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
HMGCR-206ENST00000508070 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
HMGCR-206ENST00000508070 KIF20BQ96Q89 1820 aa10.84□□□□□ -0.67
HMGCR-206ENST00000508070 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
HMGCR-206ENST00000508070 TM4SF1P30408 202 aa10.83□□□□□ -0.68
HMGCR-206ENST00000508070 MTHFSP49914 203 aa10.83□□□□□ -0.68
HMGCR-206ENST00000508070 FKBP8Q14318 412 aa10.83□□□□□ -0.68
HMGCR-206ENST00000508070 ZNF530Q6P9A1 599 aaPredicted RBP10.83□□□□□ -0.68
HMGCR-206ENST00000508070 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
HMGCR-206ENST00000508070 COL13A1Q5TAT6 717 aaPredicted RBP10.82□□□□□ -0.68
HMGCR-206ENST00000508070 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
HMGCR-206ENST00000508070 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
HMGCR-206ENST00000508070 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
HMGCR-206ENST00000508070 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
HMGCR-206ENST00000508070 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
HMGCR-206ENST00000508070 C4AP0C0L4 1744 aa10.81□□□□□ -0.68
HMGCR-206ENST00000508070 KIAA1551Q9HCM1 1747 aa10.81□□□□□ -0.68
HMGCR-206ENST00000508070 TNNT2P45379 298 aaPredicted RBP10.81□□□□□ -0.68
HMGCR-206ENST00000508070 HTRA3P83110 453 aa10.81□□□□□ -0.68
HMGCR-206ENST00000508070 DDR1Q08345 913 aa10.81□□□□□ -0.68
HMGCR-206ENST00000508070 C1orf141Q5JVX7 400 aa10.81□□□□□ -0.68
HMGCR-206ENST00000508070 SRP68Q9UHB9 627 aaKnown RBP10.81□□□□□ -0.68
HMGCR-206ENST00000508070 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
HMGCR-206ENST00000508070 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
HMGCR-206ENST00000508070 ZPR1O75312 459 aa10.8□□□□□ -0.68
HMGCR-206ENST00000508070 VEGFAP15692 232 aaPredicted RBP10.8□□□□□ -0.68
HMGCR-206ENST00000508070 CHRNA5P30532 468 aa10.8□□□□□ -0.68
HMGCR-206ENST00000508070 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
HMGCR-206ENST00000508070 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
HMGCR-206ENST00000508070 ANKRD26Q9UPS8 1709 aa10.79□□□□□ -0.68
HMGCR-206ENST00000508070 KDM6AO15550 1401 aaPredicted RBP10.79□□□□□ -0.68
HMGCR-206ENST00000508070 LMNB1P20700 586 aa10.79□□□□□ -0.68
HMGCR-206ENST00000508070 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
HMGCR-206ENST00000508070 KCPQ6ZWJ8 1503 aa10.79□□□□□ -0.68
HMGCR-206ENST00000508070 GLTPD2A6NH11 291 aa10.78□□□□□ -0.68
HMGCR-206ENST00000508070 PRELPP51888 382 aa10.78□□□□□ -0.68
HMGCR-206ENST00000508070 ARFGEF1Q9Y6D6 1849 aa10.78□□□□□ -0.68
HMGCR-206ENST00000508070 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
HMGCR-206ENST00000508070 MYH14Q7Z406 1995 aaKnown RBP10.77□□□□□ -0.68
HMGCR-206ENST00000508070 USPL1Q5W0Q7 1092 aa10.77□□□□□ -0.69
HMGCR-206ENST00000508070 TTLL6Q8N841 843 aa10.77□□□□□ -0.69
HMGCR-206ENST00000508070 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
HMGCR-206ENST00000508070 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
HMGCR-206ENST00000508070 BRCA1P38398 1863 aaKnown RBP10.76□□□□□ -0.69
HMGCR-206ENST00000508070 SULT6B1Q6IMI4 303 aa10.76□□□□□ -0.69
HMGCR-206ENST00000508070 AEBP1Q8IUX7 1158 aa10.76□□□□□ -0.69
HMGCR-206ENST00000508070 DNAJC10Q8IXB1 793 aa10.76□□□□□ -0.69
HMGCR-206ENST00000508070 SOS1Q07889 1333 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-206ENST00000508070 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-206ENST00000508070 CAPN15O75808 1086 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 SERPINB2P05120 415 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-206ENST00000508070 NFIXQ14938 502 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms