RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
DDX41-207ENST00000507900 IGHDP01880 384 aa21.07■□□□□ 0.96
DDX41-207ENST00000507900 PHKG2P15735 406 aa21.06■□□□□ 0.96
DDX41-207ENST00000507900 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
DDX41-207ENST00000507900 CARD10Q9BWT7 1032 aa21.06■□□□□ 0.96
DDX41-207ENST00000507900 SHANK3Q9BYB0 1731 aa21.06■□□□□ 0.96
DDX41-207ENST00000507900 CCDC30Q5VVM6 783 aa21.05■□□□□ 0.96
DDX41-207ENST00000507900 IFNL2Q8IZJ0 200 aa21.05■□□□□ 0.96
DDX41-207ENST00000507900 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
DDX41-207ENST00000507900 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
DDX41-207ENST00000507900 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
DDX41-207ENST00000507900 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
DDX41-207ENST00000507900 ZBTB7BO15156 539 aaPredicted RBP21.03■□□□□ 0.96
DDX41-207ENST00000507900 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
DDX41-207ENST00000507900 STK31Q9BXU1 1019 aa21.03■□□□□ 0.96
DDX41-207ENST00000507900 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
DDX41-207ENST00000507900 PLCH1Q4KWH8 1693 aa21.02■□□□□ 0.96
DDX41-207ENST00000507900 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
DDX41-207ENST00000507900 HSP90AB1P08238 724 aaKnown RBP21.02■□□□□ 0.95
DDX41-207ENST00000507900 HDAC1Q13547 482 aaPredicted RBP21.02■□□□□ 0.95
DDX41-207ENST00000507900 CYP27B1O15528 508 aa21.01■□□□□ 0.95
DDX41-207ENST00000507900 DCAF5Q96JK2 942 aa21.01■□□□□ 0.95
DDX41-207ENST00000507900 TOM1O60784 492 aa21■□□□□ 0.95
DDX41-207ENST00000507900 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
DDX41-207ENST00000507900 SLC52A2Q9HAB3 445 aa21■□□□□ 0.95
DDX41-207ENST00000507900 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
DDX41-207ENST00000507900 PXDNLA1KZ92 1463 aa20.99■□□□□ 0.95
DDX41-207ENST00000507900 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
DDX41-207ENST00000507900 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
DDX41-207ENST00000507900 KCNQ3O43525 872 aa20.98■□□□□ 0.95
DDX41-207ENST00000507900 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
DDX41-207ENST00000507900 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
DDX41-207ENST00000507900 IL2RBP14784 551 aa20.97■□□□□ 0.95
DDX41-207ENST00000507900 EVA1CP58658 441 aa20.97■□□□□ 0.95
DDX41-207ENST00000507900 G2E3Q7L622 706 aa20.97■□□□□ 0.95
DDX41-207ENST00000507900 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
DDX41-207ENST00000507900 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
DDX41-207ENST00000507900 FLIIQ13045 1269 aa20.96■□□□□ 0.95
DDX41-207ENST00000507900 ZCRB1Q8TBF4 217 aaKnown RBP20.96■□□□□ 0.95
DDX41-207ENST00000507900 STRN4Q9NRL3 753 aa20.96■□□□□ 0.95
DDX41-207ENST00000507900 C5P01031 1676 aa20.95■□□□□ 0.94
DDX41-207ENST00000507900 BTG4Q9NY30 223 aa20.95■□□□□ 0.94
DDX41-207ENST00000507900 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
DDX41-207ENST00000507900 GIGYF1O75420 1035 aaPredicted RBP20.94■□□□□ 0.94
DDX41-207ENST00000507900 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
DDX41-207ENST00000507900 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
DDX41-207ENST00000507900 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
DDX41-207ENST00000507900 UBR2Q8IWV8 1755 aa20.93■□□□□ 0.94
DDX41-207ENST00000507900 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
DDX41-207ENST00000507900 ZNF790Q6PG37 636 aa20.93■□□□□ 0.94
DDX41-207ENST00000507900 GLI3P10071 1580 aa20.92■□□□□ 0.94
DDX41-207ENST00000507900 NWD2Q9ULI1 1742 aa20.92■□□□□ 0.94
DDX41-207ENST00000507900 SMC5Q8IY18 1101 aa20.92■□□□□ 0.94
DDX41-207ENST00000507900 LAMB4A4D0S4 1761 aa20.92■□□□□ 0.94
DDX41-207ENST00000507900 NFATC2IPQ8NCF5 419 aa20.91■□□□□ 0.94
DDX41-207ENST00000507900 TOGARAM1Q9Y4F4 1720 aa20.91■□□□□ 0.94
DDX41-207ENST00000507900 NECTIN2Q92692 538 aa20.9■□□□□ 0.94
DDX41-207ENST00000507900 ATP10DQ9P241 1426 aa20.9■□□□□ 0.94
DDX41-207ENST00000507900 FKBP5Q13451 457 aaPredicted RBP20.89■□□□□ 0.94
DDX41-207ENST00000507900 ERVV-2B6SEH9 535 aa20.89■□□□□ 0.93
DDX41-207ENST00000507900 CHPF2Q9P2E5 772 aa20.89■□□□□ 0.93
DDX41-207ENST00000507900 DBF4Q9UBU7 674 aaPredicted RBP20.89■□□□□ 0.93
DDX41-207ENST00000507900 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
DDX41-207ENST00000507900 F6X3S4 739 aa20.88■□□□□ 0.93
DDX41-207ENST00000507900 EIF2S2P20042 333 aaKnown RBP20.88■□□□□ 0.93
DDX41-207ENST00000507900 CABP4P57796 275 aa20.88■□□□□ 0.93
DDX41-207ENST00000507900 LRP6O75581 1613 aa20.87■□□□□ 0.93
DDX41-207ENST00000507900 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
DDX41-207ENST00000507900 BACH2Q9BYV9 841 aa20.86■□□□□ 0.93
DDX41-207ENST00000507900 PDE4AP27815 886 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 RGS3P49796 1198 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 SLC39A6Q13433 755 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 SIRT2Q8IXJ6 389 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 PHAXQ9H814 394 aaKnown RBP20.85■□□□□ 0.93
DDX41-207ENST00000507900 UBAP1LF5GYI3 381 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 SLC4A10Q6U841 1118 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 GCC1Q96CN9 775 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 MEIS3Q99687 375 aa20.85■□□□□ 0.93
DDX41-207ENST00000507900 SLIT2O94813 1529 aa20.84■□□□□ 0.93
DDX41-207ENST00000507900 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
DDX41-207ENST00000507900 RPAP2Q8IXW5 612 aaPredicted RBP20.84■□□□□ 0.93
DDX41-207ENST00000507900 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
DDX41-207ENST00000507900 ZNF496Q96IT1 587 aaPredicted RBP20.84■□□□□ 0.93
DDX41-207ENST00000507900 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
DDX41-207ENST00000507900 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.92
DDX41-207ENST00000507900 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.92
DDX41-207ENST00000507900 HYPKQ9NX55 129 aa20.83■□□□□ 0.92
DDX41-207ENST00000507900 PRAMEF22A3QJZ6 481 aa20.82■□□□□ 0.92
DDX41-207ENST00000507900 DDX21Q9NR30 783 aaKnown RBP eCLIP20.82■□□□□ 0.92
DDX41-207ENST00000507900 ITGB4P16144 1822 aa20.82■□□□□ 0.92
DDX41-207ENST00000507900 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
DDX41-207ENST00000507900 NUCB1Q02818 461 aa20.81■□□□□ 0.92
DDX41-207ENST00000507900 USP35Q9P2H5 1018 aa20.81■□□□□ 0.92
DDX41-207ENST00000507900 ADCY9O60503 1353 aa20.81■□□□□ 0.92
DDX41-207ENST00000507900 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
DDX41-207ENST00000507900 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
DDX41-207ENST00000507900 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
DDX41-207ENST00000507900 THRAP3Q9Y2W1 955 aaKnown RBP20.8■□□□□ 0.92
DDX41-207ENST00000507900 JCADQ9P266 1359 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms