RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
POLR2J3-212ENST00000507355 KIAA1551Q9HCM1 1747 aa18.5■□□□□ 0.55
POLR2J3-212ENST00000507355 ITPK1Q13572 414 aa18.5■□□□□ 0.55
POLR2J3-212ENST00000507355 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
POLR2J3-212ENST00000507355 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
POLR2J3-212ENST00000507355 BCS1LQ9Y276 419 aa18.5■□□□□ 0.55
POLR2J3-212ENST00000507355 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
POLR2J3-212ENST00000507355 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
POLR2J3-212ENST00000507355 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
POLR2J3-212ENST00000507355 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
POLR2J3-212ENST00000507355 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
POLR2J3-212ENST00000507355 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-212ENST00000507355 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-212ENST00000507355 TOMM70O94826 608 aa18.47■□□□□ 0.55
POLR2J3-212ENST00000507355 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
POLR2J3-212ENST00000507355 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
POLR2J3-212ENST00000507355 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
POLR2J3-212ENST00000507355 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
POLR2J3-212ENST00000507355 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
POLR2J3-212ENST00000507355 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
POLR2J3-212ENST00000507355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
POLR2J3-212ENST00000507355 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
POLR2J3-212ENST00000507355 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
POLR2J3-212ENST00000507355 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
POLR2J3-212ENST00000507355 PANK3Q9H999 370 aa18.44■□□□□ 0.54
POLR2J3-212ENST00000507355 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
POLR2J3-212ENST00000507355 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
POLR2J3-212ENST00000507355 TGFB2P61812 414 aa18.43■□□□□ 0.54
POLR2J3-212ENST00000507355 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
POLR2J3-212ENST00000507355 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
POLR2J3-212ENST00000507355 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
POLR2J3-212ENST00000507355 FCHSD2O94868 740 aa18.42■□□□□ 0.54
POLR2J3-212ENST00000507355 PHKG2P15735 406 aa18.42■□□□□ 0.54
POLR2J3-212ENST00000507355 DPEP1P16444 411 aa18.42■□□□□ 0.54
POLR2J3-212ENST00000507355 HTRA3P83110 453 aa18.42■□□□□ 0.54
POLR2J3-212ENST00000507355 C4AP0C0L4 1744 aa18.42■□□□□ 0.54
POLR2J3-212ENST00000507355 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 NLGN1Q8N2Q7 840 aa18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 KDRP35968 1356 aa18.41■□□□□ 0.54
POLR2J3-212ENST00000507355 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
POLR2J3-212ENST00000507355 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
POLR2J3-212ENST00000507355 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
POLR2J3-212ENST00000507355 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
POLR2J3-212ENST00000507355 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
POLR2J3-212ENST00000507355 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
POLR2J3-212ENST00000507355 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
POLR2J3-212ENST00000507355 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
POLR2J3-212ENST00000507355 CAPN15O75808 1086 aa18.37■□□□□ 0.53
POLR2J3-212ENST00000507355 GYS1P13807 737 aa18.37■□□□□ 0.53
POLR2J3-212ENST00000507355 RFC4P35249 363 aa18.37■□□□□ 0.53
POLR2J3-212ENST00000507355 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
POLR2J3-212ENST00000507355 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
POLR2J3-212ENST00000507355 ZNF831Q5JPB2 1677 aa18.35■□□□□ 0.53
POLR2J3-212ENST00000507355 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-212ENST00000507355 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-212ENST00000507355 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
POLR2J3-212ENST00000507355 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
POLR2J3-212ENST00000507355 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
POLR2J3-212ENST00000507355 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-212ENST00000507355 KCNA3P22001 575 aa18.34■□□□□ 0.53
POLR2J3-212ENST00000507355 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
POLR2J3-212ENST00000507355 ERVV-2B6SEH9 535 aa18.33■□□□□ 0.52
POLR2J3-212ENST00000507355 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
POLR2J3-212ENST00000507355 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.52
POLR2J3-212ENST00000507355 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
POLR2J3-212ENST00000507355 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
POLR2J3-212ENST00000507355 FSTL1Q12841 308 aa18.32■□□□□ 0.52
POLR2J3-212ENST00000507355 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-212ENST00000507355 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
POLR2J3-212ENST00000507355 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
POLR2J3-212ENST00000507355 PCNTO95613 3336 aa18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
POLR2J3-212ENST00000507355 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
POLR2J3-212ENST00000507355 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
POLR2J3-212ENST00000507355 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
POLR2J3-212ENST00000507355 CHRNA5P30532 468 aa18.29■□□□□ 0.52
POLR2J3-212ENST00000507355 CABP4P57796 275 aa18.29■□□□□ 0.52
POLR2J3-212ENST00000507355 DDR1Q08345 913 aa18.29■□□□□ 0.52
POLR2J3-212ENST00000507355 FKBP8Q14318 412 aa18.29■□□□□ 0.52
POLR2J3-212ENST00000507355 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
POLR2J3-212ENST00000507355 MTHFSP49914 203 aa18.28■□□□□ 0.52
POLR2J3-212ENST00000507355 TNS4Q8IZW8 715 aa18.28■□□□□ 0.52
POLR2J3-212ENST00000507355 SBF1O95248 1867 aa18.28■□□□□ 0.52
POLR2J3-212ENST00000507355 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
POLR2J3-212ENST00000507355 SULT6B1Q6IMI4 303 aa18.27■□□□□ 0.52
POLR2J3-212ENST00000507355 IL13P35225 146 aa18.26■□□□□ 0.51
POLR2J3-212ENST00000507355 RASSF7Q02833 373 aa18.26■□□□□ 0.51
POLR2J3-212ENST00000507355 C1orf141Q5JVX7 400 aa18.26■□□□□ 0.51
POLR2J3-212ENST00000507355 TJP1Q07157 1748 aa18.26■□□□□ 0.51
POLR2J3-212ENST00000507355 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
POLR2J3-212ENST00000507355 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8870.6 ms