RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
NEDD4-206ENST00000507063 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
NEDD4-206ENST00000507063 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
NEDD4-206ENST00000507063 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-206ENST00000507063 ACEP12821 1306 aa9.46□□□□□ -0.9
NEDD4-206ENST00000507063 COL14A1Q05707 1796 aaKnown RBP9.45□□□□□ -0.9
NEDD4-206ENST00000507063 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
NEDD4-206ENST00000507063 NBPF8Q3BBV2 869 aa9.45□□□□□ -0.9
NEDD4-206ENST00000507063 USP35Q9P2H5 1018 aa9.45□□□□□ -0.9
NEDD4-206ENST00000507063 TSR3Q9UJK0 312 aaKnown RBP9.45□□□□□ -0.9
NEDD4-206ENST00000507063 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
NEDD4-206ENST00000507063 Q6ZNB5 142 aa9.44□□□□□ -0.9
NEDD4-206ENST00000507063 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
NEDD4-206ENST00000507063 WBP1LQ9NX94 342 aa9.44□□□□□ -0.9
NEDD4-206ENST00000507063 SPATA31A1Q5TZJ5 1347 aa9.43□□□□□ -0.9
NEDD4-206ENST00000507063 HRCP23327 699 aa9.43□□□□□ -0.9
NEDD4-206ENST00000507063 LAPTM4AQ15012 233 aa9.43□□□□□ -0.9
NEDD4-206ENST00000507063 E2F4Q16254 413 aa9.43□□□□□ -0.9
NEDD4-206ENST00000507063 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
NEDD4-206ENST00000507063 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
NEDD4-206ENST00000507063 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-206ENST00000507063 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
NEDD4-206ENST00000507063 TRIM37O94972 964 aa9.42□□□□□ -0.9
NEDD4-206ENST00000507063 BAG6P46379 1132 aa9.42□□□□□ -0.9
NEDD4-206ENST00000507063 R3HDM1Q15032 1099 aaKnown RBP9.42□□□□□ -0.9
NEDD4-206ENST00000507063 ABTB2Q8N961 1025 aa9.42□□□□□ -0.9
NEDD4-206ENST00000507063 HPS5Q9UPZ3 1129 aa9.42□□□□□ -0.9
NEDD4-206ENST00000507063 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
NEDD4-206ENST00000507063 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
NEDD4-206ENST00000507063 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
NEDD4-206ENST00000507063 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
NEDD4-206ENST00000507063 CAMTA1Q9Y6Y1 1673 aa9.41□□□□□ -0.9
NEDD4-206ENST00000507063 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.9
NEDD4-206ENST00000507063 EVA1CP58658 441 aa9.4□□□□□ -0.9
NEDD4-206ENST00000507063 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
NEDD4-206ENST00000507063 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
NEDD4-206ENST00000507063 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 GCP02774 474 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 L3MBTL2Q969R5 705 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 CAMKK2Q96RR4 588 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 WDR70Q9NW82 654 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 TNS1Q9HBL0 1735 aaKnown RBP9.39□□□□□ -0.91
NEDD4-206ENST00000507063 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 SSH2Q76I76 1423 aa9.39□□□□□ -0.91
NEDD4-206ENST00000507063 NRKQ7Z2Y5 1582 aa9.38□□□□□ -0.91
NEDD4-206ENST00000507063 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-206ENST00000507063 APBA3O96018 575 aa9.38□□□□□ -0.91
NEDD4-206ENST00000507063 PDIA6Q15084 440 aa9.38□□□□□ -0.91
NEDD4-206ENST00000507063 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-206ENST00000507063 USP19O94966 1318 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 RGPD1P0DJD0 1748 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 MAP3K7O43318 606 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 PPP4CP60510 307 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 PDE3BQ13370 1112 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 PTF1AQ7RTS3 328 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 DDX12PQ92771 950 aa9.37□□□□□ -0.91
NEDD4-206ENST00000507063 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-206ENST00000507063 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 NBR1Q14596 966 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 TCP11L2Q8N4U5 519 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 UTRNP46939 3433 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
NEDD4-206ENST00000507063 LRP5O75197 1615 aa9.35□□□□□ -0.91
NEDD4-206ENST00000507063 DISP2A7MBM2 1401 aa9.35□□□□□ -0.91
NEDD4-206ENST00000507063 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
NEDD4-206ENST00000507063 CPDO75976 1380 aa9.35□□□□□ -0.91
NEDD4-206ENST00000507063 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
NEDD4-206ENST00000507063 QRICH2Q9H0J4 1663 aa9.34□□□□□ -0.91
NEDD4-206ENST00000507063 USP6P35125 1406 aa9.33□□□□□ -0.92
NEDD4-206ENST00000507063 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
NEDD4-206ENST00000507063 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
NEDD4-206ENST00000507063 PIK3C2AO00443 1686 aa9.32□□□□□ -0.92
NEDD4-206ENST00000507063 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
NEDD4-206ENST00000507063 CRB1P82279 1406 aa9.31□□□□□ -0.92
NEDD4-206ENST00000507063 TOM1L2Q6ZVM7 507 aa9.31□□□□□ -0.92
NEDD4-206ENST00000507063 MARCH10Q8NA82 808 aaPredicted RBP9.31□□□□□ -0.92
NEDD4-206ENST00000507063 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
NEDD4-206ENST00000507063 THRAP3Q9Y2W1 955 aaKnown RBP9.31□□□□□ -0.92
NEDD4-206ENST00000507063 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
NEDD4-206ENST00000507063 SLIT3O75094 1523 aa9.31□□□□□ -0.92
NEDD4-206ENST00000507063 COL18A1P39060 1754 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 RREB1Q92766 1687 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 NUP188Q5SRE5 1749 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
NEDD4-206ENST00000507063 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
NEDD4-206ENST00000507063 PEAK1Q9H792 1746 aa9.29□□□□□ -0.92
NEDD4-206ENST00000507063 PARP4Q9UKK3 1724 aaKnown RBP9.29□□□□□ -0.92
NEDD4-206ENST00000507063 GFRA3O60609 400 aa9.29□□□□□ -0.92
NEDD4-206ENST00000507063 PRSS12P56730 875 aa9.29□□□□□ -0.92
NEDD4-206ENST00000507063 DDB1Q16531 1140 aa9.29□□□□□ -0.92
NEDD4-206ENST00000507063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.29□□□□□ -0.922e-6■■■□□ 17.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms