RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 TRAPPC3LQ5T215 181 aa11.36□□□□□ -0.59
SNF8-204ENST00000506104 ARHGAP27Q6ZUM4 889 aa11.36□□□□□ -0.59
SNF8-204ENST00000506104 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
SNF8-204ENST00000506104 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
SNF8-204ENST00000506104 HSPA6P17066 643 aa11.35□□□□□ -0.59
SNF8-204ENST00000506104 RFC4P35249 363 aa11.35□□□□□ -0.59
SNF8-204ENST00000506104 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
SNF8-204ENST00000506104 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
SNF8-204ENST00000506104 CICQ96RK0 1608 aaPredicted RBP11.35□□□□□ -0.59
SNF8-204ENST00000506104 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
SNF8-204ENST00000506104 CABP4P57796 275 aa11.34□□□□□ -0.59
SNF8-204ENST00000506104 NKX1-1Q15270 411 aaPredicted RBP11.34□□□□□ -0.59
SNF8-204ENST00000506104 IFFO2Q5TF58 517 aa11.34□□□□□ -0.59
SNF8-204ENST00000506104 ZNF530Q6P9A1 599 aaPredicted RBP11.34□□□□□ -0.59
SNF8-204ENST00000506104 POLKQ9UBT6 870 aa11.34□□□□□ -0.59
SNF8-204ENST00000506104 PARP3Q9Y6F1 533 aa11.34□□□□□ -0.59
SNF8-204ENST00000506104 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
SNF8-204ENST00000506104 PTCD1O75127 700 aaKnown RBP11.33□□□□□ -0.6
SNF8-204ENST00000506104 FCHSD2O94868 740 aa11.33□□□□□ -0.6
SNF8-204ENST00000506104 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
SNF8-204ENST00000506104 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
SNF8-204ENST00000506104 C1orf141Q5JVX7 400 aa11.33□□□□□ -0.6
SNF8-204ENST00000506104 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
SNF8-204ENST00000506104 DPEP1P16444 411 aa11.32□□□□□ -0.6
SNF8-204ENST00000506104 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
SNF8-204ENST00000506104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNF8-204ENST00000506104 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
SNF8-204ENST00000506104 MTHFSP49914 203 aa11.31□□□□□ -0.6
SNF8-204ENST00000506104 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
SNF8-204ENST00000506104 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
SNF8-204ENST00000506104 ADCY9O60503 1353 aa11.3□□□□□ -0.6
SNF8-204ENST00000506104 C4AP0C0L4 1744 aa11.3□□□□□ -0.6
SNF8-204ENST00000506104 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
SNF8-204ENST00000506104 PANK3Q9H999 370 aa11.3□□□□□ -0.6
SNF8-204ENST00000506104 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
SNF8-204ENST00000506104 MYH14Q7Z406 1995 aaKnown RBP11.3□□□□□ -0.6
SNF8-204ENST00000506104 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
SNF8-204ENST00000506104 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
SNF8-204ENST00000506104 KIF3CO14782 793 aa11.29□□□□□ -0.6
SNF8-204ENST00000506104 TGFB2P61812 414 aa11.29□□□□□ -0.6
SNF8-204ENST00000506104 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
SNF8-204ENST00000506104 DCAF5Q96JK2 942 aa11.29□□□□□ -0.6
SNF8-204ENST00000506104 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
SNF8-204ENST00000506104 KIF13BQ9NQT8 1826 aa11.29□□□□□ -0.6
SNF8-204ENST00000506104 NCAPD2Q15021 1401 aa11.28□□□□□ -0.6
SNF8-204ENST00000506104 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
SNF8-204ENST00000506104 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
SNF8-204ENST00000506104 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
SNF8-204ENST00000506104 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
SNF8-204ENST00000506104 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
SNF8-204ENST00000506104 KIAA1551Q9HCM1 1747 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
SNF8-204ENST00000506104 GYS1P13807 737 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.61
SNF8-204ENST00000506104 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 C9orf131Q5VYM1 1079 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 SULT6B1Q6IMI4 303 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
SNF8-204ENST00000506104 UTRNP46939 3433 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 ZPR1O75312 459 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 APLP1P51693 650 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNF8-204ENST00000506104 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
SNF8-204ENST00000506104 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 PIM2Q9P1W9 311 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 KDRP35968 1356 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
SNF8-204ENST00000506104 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
SNF8-204ENST00000506104 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
SNF8-204ENST00000506104 TOMM70O94826 608 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 CHRNA5P30532 468 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 FKBP8Q14318 412 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
SNF8-204ENST00000506104 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
SNF8-204ENST00000506104 HTRA3P83110 453 aa11.24□□□□□ -0.61
SNF8-204ENST00000506104 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
SNF8-204ENST00000506104 TJP1Q07157 1748 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 HMOX1P09601 288 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 USPL1Q5W0Q7 1092 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 DNAJC10Q8IXB1 793 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
SNF8-204ENST00000506104 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
SNF8-204ENST00000506104 CAPN15O75808 1086 aa11.22□□□□□ -0.61
SNF8-204ENST00000506104 SBF1O95248 1867 aa11.22□□□□□ -0.61
SNF8-204ENST00000506104 DDR1Q08345 913 aa11.22□□□□□ -0.61
SNF8-204ENST00000506104 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
SNF8-204ENST00000506104 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
SNF8-204ENST00000506104 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.61
SNF8-204ENST00000506104 RASSF7Q02833 373 aa11.21□□□□□ -0.61
SNF8-204ENST00000506104 LGR6Q9HBX8 967 aa11.21□□□□□ -0.61
SNF8-204ENST00000506104 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
SNF8-204ENST00000506104 TIMELESSQ9UNS1 1208 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms