RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
CCSER1-205ENST00000505073 MEGF6O75095 1541 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 ABCC4O15439 1325 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 RGS3P49796 1198 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 ABCC6O95255 1503 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
CCSER1-205ENST00000505073 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
CCSER1-205ENST00000505073 KCNQ3O43525 872 aa16.62■□□□□ 0.25
CCSER1-205ENST00000505073 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
CCSER1-205ENST00000505073 G2E3Q7L622 706 aa16.61■□□□□ 0.25
CCSER1-205ENST00000505073 ROBO1Q9Y6N7 1651 aa16.6■□□□□ 0.25
CCSER1-205ENST00000505073 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
CCSER1-205ENST00000505073 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
CCSER1-205ENST00000505073 RGS12O14924 1447 aa16.59■□□□□ 0.25
CCSER1-205ENST00000505073 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
CCSER1-205ENST00000505073 TOM1L2Q6ZVM7 507 aa16.59■□□□□ 0.25
CCSER1-205ENST00000505073 WDR17Q8IZU2 1322 aa16.59■□□□□ 0.25
CCSER1-205ENST00000505073 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
CCSER1-205ENST00000505073 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
CCSER1-205ENST00000505073 STK31Q9BXU1 1019 aa16.58■□□□□ 0.25
CCSER1-205ENST00000505073 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.25
CCSER1-205ENST00000505073 STRN4Q9NRL3 753 aa16.58■□□□□ 0.25
CCSER1-205ENST00000505073 COL5A2P05997 1499 aaPredicted RBP16.58■□□□□ 0.24
CCSER1-205ENST00000505073 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
CCSER1-205ENST00000505073 PHKG2P15735 406 aa16.58■□□□□ 0.24
CCSER1-205ENST00000505073 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
CCSER1-205ENST00000505073 PTPRCP08575 1304 aa16.57■□□□□ 0.24
CCSER1-205ENST00000505073 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
CCSER1-205ENST00000505073 CYP27B1O15528 508 aa16.56■□□□□ 0.24
CCSER1-205ENST00000505073 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
CCSER1-205ENST00000505073 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
CCSER1-205ENST00000505073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCSER1-205ENST00000505073 OVOS2A0A0G2JMS6 1433 aa16.56■□□□□ 0.24
CCSER1-205ENST00000505073 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
CCSER1-205ENST00000505073 F6X3S4 739 aa16.55■□□□□ 0.24
CCSER1-205ENST00000505073 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
CCSER1-205ENST00000505073 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
CCSER1-205ENST00000505073 EVA1CP58658 441 aa16.55■□□□□ 0.24
CCSER1-205ENST00000505073 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
CCSER1-205ENST00000505073 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
CCSER1-205ENST00000505073 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
CCSER1-205ENST00000505073 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
CCSER1-205ENST00000505073 FLIIQ13045 1269 aa16.53■□□□□ 0.24
CCSER1-205ENST00000505073 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
CCSER1-205ENST00000505073 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
CCSER1-205ENST00000505073 ADAMTS7Q9UKP4 1686 aa16.53■□□□□ 0.24
CCSER1-205ENST00000505073 AHDC1Q5TGY3 1603 aaPredicted RBP16.53■□□□□ 0.24
CCSER1-205ENST00000505073 BECN1Q14457 450 aa16.53■□□□□ 0.24
CCSER1-205ENST00000505073 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
CCSER1-205ENST00000505073 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
CCSER1-205ENST00000505073 FKBP5Q13451 457 aaPredicted RBP16.52■□□□□ 0.24
CCSER1-205ENST00000505073 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
CCSER1-205ENST00000505073 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.24
CCSER1-205ENST00000505073 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
CCSER1-205ENST00000505073 SCN11AQ9UI33 1791 aa16.52■□□□□ 0.24
CCSER1-205ENST00000505073 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.23
CCSER1-205ENST00000505073 BTG4Q9NY30 223 aa16.52■□□□□ 0.23
CCSER1-205ENST00000505073 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
CCSER1-205ENST00000505073 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
CCSER1-205ENST00000505073 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
CCSER1-205ENST00000505073 ANXA1P04083 346 aa16.5■□□□□ 0.23
CCSER1-205ENST00000505073 HOXB7P09629 217 aa16.5■□□□□ 0.23
CCSER1-205ENST00000505073 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
CCSER1-205ENST00000505073 CHPF2Q9P2E5 772 aa16.5■□□□□ 0.23
CCSER1-205ENST00000505073 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
CCSER1-205ENST00000505073 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CCSER1-205ENST00000505073 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
CCSER1-205ENST00000505073 IL2RBP14784 551 aa16.49■□□□□ 0.23
CCSER1-205ENST00000505073 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
CCSER1-205ENST00000505073 MEIS3Q99687 375 aa16.49■□□□□ 0.23
CCSER1-205ENST00000505073 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
CCSER1-205ENST00000505073 L1TD1Q5T7N2 865 aaKnown RBP16.48■□□□□ 0.23
CCSER1-205ENST00000505073 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
CCSER1-205ENST00000505073 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
CCSER1-205ENST00000505073 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
CCSER1-205ENST00000505073 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
CCSER1-205ENST00000505073 CCT4P50991 539 aaKnown RBP16.47■□□□□ 0.23
CCSER1-205ENST00000505073 HEG1Q9ULI3 1381 aa16.47■□□□□ 0.23
CCSER1-205ENST00000505073 SEC24BO95487 1268 aa16.47■□□□□ 0.23
CCSER1-205ENST00000505073 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
CCSER1-205ENST00000505073 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
CCSER1-205ENST00000505073 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
CCSER1-205ENST00000505073 PHLPP1O60346 1717 aa16.46■□□□□ 0.23
CCSER1-205ENST00000505073 CABP4P57796 275 aa16.46■□□□□ 0.23
CCSER1-205ENST00000505073 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
CCSER1-205ENST00000505073 TOM1O60784 492 aa16.45■□□□□ 0.22
CCSER1-205ENST00000505073 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
CCSER1-205ENST00000505073 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
CCSER1-205ENST00000505073 SLKQ9H2G2 1235 aaPredicted RBP16.45■□□□□ 0.22
CCSER1-205ENST00000505073 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
CCSER1-205ENST00000505073 COL16A1Q07092 1604 aaPredicted RBP16.45■□□□□ 0.22
CCSER1-205ENST00000505073 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
CCSER1-205ENST00000505073 MRC1P22897 1456 aa16.44■□□□□ 0.22
CCSER1-205ENST00000505073 COL14A1Q05707 1796 aaKnown RBP16.44■□□□□ 0.22
CCSER1-205ENST00000505073 CHMP4AQ9BY43 222 aa16.43■□□□□ 0.22
CCSER1-205ENST00000505073 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms