RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
DEPDC1B-203ENST00000505017 GPAMQ9HCL2 828 aa10.55□□□□□ -0.72
DEPDC1B-203ENST00000505017 POM121CA8CG34 1229 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 TMEM229AB2RXF0 380 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 INHAP05111 366 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 KCNMA1Q12791 1236 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 PCDHGA11Q9Y5H2 935 aa10.54□□□□□ -0.72
DEPDC1B-203ENST00000505017 SOX11P35716 441 aa10.53□□□□□ -0.72
DEPDC1B-203ENST00000505017 GDF10P55107 478 aa10.53□□□□□ -0.72
DEPDC1B-203ENST00000505017 MBIPQ9NS73 344 aa10.53□□□□□ -0.72
DEPDC1B-203ENST00000505017 IGF1RP08069 1367 aa10.52□□□□□ -0.72
DEPDC1B-203ENST00000505017 CELA2BP08218 269 aaPredicted RBP10.52□□□□□ -0.73
DEPDC1B-203ENST00000505017 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
DEPDC1B-203ENST00000505017 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
DEPDC1B-203ENST00000505017 USP3Q9Y6I4 520 aa10.52□□□□□ -0.73
DEPDC1B-203ENST00000505017 H7C1W4 665 aa10.51□□□□□ -0.73
DEPDC1B-203ENST00000505017 TLR1Q15399 786 aa10.51□□□□□ -0.73
DEPDC1B-203ENST00000505017 TMEM214Q6NUQ4 689 aaKnown RBP10.51□□□□□ -0.73
DEPDC1B-203ENST00000505017 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
DEPDC1B-203ENST00000505017 MSX1P28360 303 aa10.5□□□□□ -0.73
DEPDC1B-203ENST00000505017 RHBDD1Q8TEB9 315 aa10.5□□□□□ -0.73
DEPDC1B-203ENST00000505017 ACDQ96AP0 544 aa10.5□□□□□ -0.73
DEPDC1B-203ENST00000505017 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
DEPDC1B-203ENST00000505017 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
DEPDC1B-203ENST00000505017 IQSEC3Q9UPP2 1182 aaPredicted RBP10.49□□□□□ -0.73
DEPDC1B-203ENST00000505017 GNASQ5JWF2 1037 aa10.48□□□□□ -0.73
DEPDC1B-203ENST00000505017 SLC4A9Q96Q91 983 aa10.48□□□□□ -0.73
DEPDC1B-203ENST00000505017 SERTAD1Q9UHV2 236 aa10.48□□□□□ -0.73
DEPDC1B-203ENST00000505017 HCN2Q9UL51 889 aa10.48□□□□□ -0.73
DEPDC1B-203ENST00000505017 SMTNP53814 917 aa10.47□□□□□ -0.73
DEPDC1B-203ENST00000505017 FOXR1Q6PIV2 292 aa10.47□□□□□ -0.73
DEPDC1B-203ENST00000505017 UCN2Q96RP3 112 aa10.47□□□□□ -0.73
DEPDC1B-203ENST00000505017 SKIP12755 728 aa10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 ATP4AP20648 1035 aa10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 RASSF7Q02833 373 aa10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 NDFIP2Q9NV92 336 aa10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
DEPDC1B-203ENST00000505017 PLA2G4AP47712 749 aa10.45□□□□□ -0.74
DEPDC1B-203ENST00000505017 NCOA4Q13772 614 aa10.45□□□□□ -0.74
DEPDC1B-203ENST00000505017 MTFR1Q15390 333 aa10.45□□□□□ -0.74
DEPDC1B-203ENST00000505017 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
DEPDC1B-203ENST00000505017 UBTFP17480 764 aaKnown RBP10.44□□□□□ -0.74
DEPDC1B-203ENST00000505017 MX2P20592 715 aa10.44□□□□□ -0.74
DEPDC1B-203ENST00000505017 FLIIQ13045 1269 aa10.44□□□□□ -0.74
DEPDC1B-203ENST00000505017 TRERF1Q96PN7 1200 aa10.44□□□□□ -0.74
DEPDC1B-203ENST00000505017 C2CD2LO14523 706 aa10.43□□□□□ -0.74
DEPDC1B-203ENST00000505017 C1orf229Q6ZS94 237 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-203ENST00000505017 CFHR5Q9BXR6 569 aa10.43□□□□□ -0.74
DEPDC1B-203ENST00000505017 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
DEPDC1B-203ENST00000505017 A6NJY4 79 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 BNIP3LO60238 219 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 EML3Q32P44 896 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 FNBP4Q8N3X1 1017 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 ABHD17AQ96GS6 310 aa10.42□□□□□ -0.74
DEPDC1B-203ENST00000505017 CDK2AP1O14519 115 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 BCRP11274 1271 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 EPHA4P54764 986 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 GTF2IP78347 998 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 ZNF358Q9NW07 568 aa10.41□□□□□ -0.74
DEPDC1B-203ENST00000505017 ZBTB7BO15156 539 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 RAD21O60216 631 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 GDF11O95390 407 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 IRS1P35568 1242 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 NOD1Q9Y239 953 aa10.4□□□□□ -0.74
DEPDC1B-203ENST00000505017 CTBSQ01459 385 aa10.39□□□□□ -0.75
DEPDC1B-203ENST00000505017 TMEM151AQ8N4L1 468 aa10.39□□□□□ -0.75
DEPDC1B-203ENST00000505017 ZDHHC1Q8WTX9 485 aa10.39□□□□□ -0.75
DEPDC1B-203ENST00000505017 KLRG1Q96E93 195 aa10.39□□□□□ -0.75
DEPDC1B-203ENST00000505017 NIFKQ9BYG3 293 aaKnown RBP10.39□□□□□ -0.75
DEPDC1B-203ENST00000505017 CNTNAP5Q8WYK1 1306 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 CSB-PGBD3P0DP91 1061 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 CLDN10P78369 228 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 FOXK2Q01167 660 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 PGBD3Q8N328 593 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 SCHIP1Q9P0W5 487 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
DEPDC1B-203ENST00000505017 SHISA8B8ZZ34 492 aa10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 OIP5O43482 229 aa10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 LZTS3O60299 673 aaPredicted RBP10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 ZCCHC2Q9C0B9 1178 aaKnown RBP10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 ATXN7L1Q9ULK2 861 aaPredicted RBP10.37□□□□□ -0.75
DEPDC1B-203ENST00000505017 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 MARSP56192 900 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms