RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
MATR3-234ENST00000505016 C5P01031 1676 aa16.88■□□□□ 0.29
MATR3-234ENST00000505016 ITGB4P16144 1822 aa16.87■□□□□ 0.29
MATR3-234ENST00000505016 HAX1O00165 279 aa16.87■□□□□ 0.29
MATR3-234ENST00000505016 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
MATR3-234ENST00000505016 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
MATR3-234ENST00000505016 TNNT2P45379 298 aaPredicted RBP16.86■□□□□ 0.29
MATR3-234ENST00000505016 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
MATR3-234ENST00000505016 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
MATR3-234ENST00000505016 TAF1LQ8IZX4 1826 aa16.85■□□□□ 0.29
MATR3-234ENST00000505016 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
MATR3-234ENST00000505016 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
MATR3-234ENST00000505016 EVX2Q03828 476 aa16.84■□□□□ 0.29
MATR3-234ENST00000505016 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
MATR3-234ENST00000505016 PIGBQ92521 554 aa16.84■□□□□ 0.29
MATR3-234ENST00000505016 PANK3Q9H999 370 aa16.84■□□□□ 0.29
MATR3-234ENST00000505016 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
MATR3-234ENST00000505016 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
MATR3-234ENST00000505016 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
MATR3-234ENST00000505016 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
MATR3-234ENST00000505016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.28
MATR3-234ENST00000505016 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
MATR3-234ENST00000505016 GPR162Q16538 588 aa16.81■□□□□ 0.28
MATR3-234ENST00000505016 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
MATR3-234ENST00000505016 CHD4Q14839 1912 aa16.8■□□□□ 0.28
MATR3-234ENST00000505016 PHKG2P15735 406 aa16.8■□□□□ 0.28
MATR3-234ENST00000505016 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
MATR3-234ENST00000505016 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
MATR3-234ENST00000505016 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
MATR3-234ENST00000505016 IGSF1Q8N6C5 1336 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
MATR3-234ENST00000505016 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 AK7Q96M32 723 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
MATR3-234ENST00000505016 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
MATR3-234ENST00000505016 C19orf67A6NJJ6 358 aa16.77■□□□□ 0.28
MATR3-234ENST00000505016 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
MATR3-234ENST00000505016 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
MATR3-234ENST00000505016 SIK1P57059 783 aa16.77■□□□□ 0.28
MATR3-234ENST00000505016 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
MATR3-234ENST00000505016 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.27
MATR3-234ENST00000505016 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
MATR3-234ENST00000505016 PHF14O94880 888 aa16.75■□□□□ 0.27
MATR3-234ENST00000505016 ITPK1Q13572 414 aa16.75■□□□□ 0.27
MATR3-234ENST00000505016 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
MATR3-234ENST00000505016 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
MATR3-234ENST00000505016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
MATR3-234ENST00000505016 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
MATR3-234ENST00000505016 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
MATR3-234ENST00000505016 SSFA2P28290 1259 aa16.72■□□□□ 0.27
MATR3-234ENST00000505016 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
MATR3-234ENST00000505016 KNSTRNQ9Y448 316 aa16.72■□□□□ 0.27
MATR3-234ENST00000505016 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
MATR3-234ENST00000505016 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
MATR3-234ENST00000505016 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
MATR3-234ENST00000505016 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
MATR3-234ENST00000505016 KDRP35968 1356 aa16.71■□□□□ 0.27
MATR3-234ENST00000505016 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
MATR3-234ENST00000505016 GNPATO15228 680 aa16.7■□□□□ 0.26
MATR3-234ENST00000505016 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
MATR3-234ENST00000505016 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
MATR3-234ENST00000505016 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
MATR3-234ENST00000505016 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
MATR3-234ENST00000505016 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
MATR3-234ENST00000505016 MIER1Q8N108 512 aa16.69■□□□□ 0.26
MATR3-234ENST00000505016 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
MATR3-234ENST00000505016 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
MATR3-234ENST00000505016 ZNF831Q5JPB2 1677 aa16.67■□□□□ 0.26
MATR3-234ENST00000505016 IL13P35225 146 aa16.67■□□□□ 0.26
MATR3-234ENST00000505016 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
MATR3-234ENST00000505016 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
MATR3-234ENST00000505016 MTHFSP49914 203 aa16.66■□□□□ 0.26
MATR3-234ENST00000505016 CABP4P57796 275 aa16.66■□□□□ 0.26
MATR3-234ENST00000505016 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
MATR3-234ENST00000505016 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
MATR3-234ENST00000505016 RTCBQ9Y3I0 505 aaKnown RBP16.64■□□□□ 0.25
MATR3-234ENST00000505016 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
MATR3-234ENST00000505016 C1QTNF8P60827 252 aa16.63■□□□□ 0.25
MATR3-234ENST00000505016 TRAPPC3LQ5T215 181 aa16.63■□□□□ 0.25
MATR3-234ENST00000505016 RC3H1Q5TC82 1133 aaKnown RBP16.63■□□□□ 0.25
MATR3-234ENST00000505016 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
MATR3-234ENST00000505016 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
MATR3-234ENST00000505016 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
MATR3-234ENST00000505016 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
MATR3-234ENST00000505016 MMP10P09238 476 aa16.62■□□□□ 0.25
MATR3-234ENST00000505016 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
MATR3-234ENST00000505016 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
MATR3-234ENST00000505016 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
MATR3-234ENST00000505016 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
MATR3-234ENST00000505016 RPS6KA4O75676 772 aa16.6■□□□□ 0.25
MATR3-234ENST00000505016 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
MATR3-234ENST00000505016 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
MATR3-234ENST00000505016 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
MATR3-234ENST00000505016 HMOX1P09601 288 aa16.59■□□□□ 0.25
MATR3-234ENST00000505016 CD44P16070 742 aaKnown RBP16.59■□□□□ 0.25
MATR3-234ENST00000505016 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
MATR3-234ENST00000505016 TJP1Q07157 1748 aa16.59■□□□□ 0.25
MATR3-234ENST00000505016 GYS1P13807 737 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms