RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 DBN1Q16643 649 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 USP17L2Q6R6M4 530 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 USP17L1Q7RTZ2 530 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 PLPP7Q8NBV4 271 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 ETNK1Q9HBU6 452 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 STK17AQ9UEE5 414 aa6.04□□□□□ -1.44
RFC1-209ENST00000504974 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
RFC1-209ENST00000504974 NCOA4Q13772 614 aa6.03□□□□□ -1.44
RFC1-209ENST00000504974 NBPF10Q6P3W6 841 aaKnown RBP6.03□□□□□ -1.44
RFC1-209ENST00000504974 SV2AQ7L0J3 742 aa6.03□□□□□ -1.44
RFC1-209ENST00000504974 NBPF15Q8N660 670 aa6.03□□□□□ -1.44
RFC1-209ENST00000504974 NANOS1Q8WY41 292 aaKnown RBP6.03□□□□□ -1.44
RFC1-209ENST00000504974 GPAMQ9HCL2 828 aa6.03□□□□□ -1.44
RFC1-209ENST00000504974 GNRH1P01148 92 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 GAS6Q14393 721 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 NFATC2IPQ8NCF5 419 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 PBXIP1Q96AQ6 731 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 ESYT1Q9BSJ8 1104 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 SERTAD1Q9UHV2 236 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 HRH3Q9Y5N1 445 aa6.02□□□□□ -1.45
RFC1-209ENST00000504974 ACIN1Q9UKV3 1341 aaKnown RBP6.01□□□□□ -1.45
RFC1-209ENST00000504974 THBS1P07996 1170 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 SCNN1DP51172 638 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 EML3Q32P44 896 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 GTPBP3Q969Y2 492 aaKnown RBP6.01□□□□□ -1.45
RFC1-209ENST00000504974 ZNF837Q96EG3 531 aaPredicted RBP6.01□□□□□ -1.45
RFC1-209ENST00000504974 XAGE2Q96GT9 111 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 FHDC1Q9C0D6 1143 aaPredicted RBP6.01□□□□□ -1.45
RFC1-209ENST00000504974 VRTNQ9H8Y1 702 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 TIMMDC1Q9NPL8 285 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 CHIC2Q9UKJ5 165 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 USP3Q9Y6I4 520 aa6.01□□□□□ -1.45
RFC1-209ENST00000504974 PPP1R15AO75807 674 aaPredicted RBP6□□□□□ -1.45
RFC1-209ENST00000504974 GPC1P35052 558 aa6□□□□□ -1.45
RFC1-209ENST00000504974 USP4Q13107 963 aa6□□□□□ -1.45
RFC1-209ENST00000504974 MAP7D1Q3KQU3 841 aa6□□□□□ -1.45
RFC1-209ENST00000504974 C4orf17Q53FE4 359 aa6□□□□□ -1.45
RFC1-209ENST00000504974 ZSCAN10Q96SZ4 725 aaPredicted RBP6□□□□□ -1.45
RFC1-209ENST00000504974 MKRN1Q9UHC7 482 aaKnown RBP6□□□□□ -1.45
RFC1-209ENST00000504974 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
RFC1-209ENST00000504974 WASLO00401 505 aaPredicted RBP5.99□□□□□ -1.45
RFC1-209ENST00000504974 GDF10P55107 478 aa5.99□□□□□ -1.45
RFC1-209ENST00000504974 PSME1Q06323 249 aa5.99□□□□□ -1.45
RFC1-209ENST00000504974 TAS1R3Q7RTX0 852 aa5.99□□□□□ -1.45
RFC1-209ENST00000504974 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
RFC1-209ENST00000504974 SPATA31C2B4DYI2 1134 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 RASA1P20936 1047 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 TLR1Q15399 786 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
RFC1-209ENST00000504974 TMEM214Q6NUQ4 689 aaKnown RBP5.98□□□□□ -1.45
RFC1-209ENST00000504974 LARP1Q6PKG0 1096 aaKnown RBP5.98□□□□□ -1.45
RFC1-209ENST00000504974 CCDC125Q86Z20 511 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 PLEKHM2Q8IWE5 1019 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 ZNF594Q96JF6 807 aaPredicted RBP5.98□□□□□ -1.45
RFC1-209ENST00000504974 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 NOD1Q9Y239 953 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 DYRK1BQ9Y463 629 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 PCDHGA11Q9Y5H2 935 aa5.98□□□□□ -1.45
RFC1-209ENST00000504974 TMEM229AB2RXF0 380 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 CSB-PGBD3P0DP91 1061 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 TBCELQ5QJ74 424 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 KANK4Q5T7N3 995 aaPredicted RBP5.97□□□□□ -1.45
RFC1-209ENST00000504974 LYPD4Q6UWN0 246 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 TRIM22Q8IYM9 498 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 PARP3Q9Y6F1 533 aa5.97□□□□□ -1.45
RFC1-209ENST00000504974 LZTS3O60299 673 aaPredicted RBP5.96□□□□□ -1.46
RFC1-209ENST00000504974 ADAMTS2O95450 1211 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 INHAP05111 366 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 PLA2G4AP47712 749 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 GTF2IP78347 998 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 TRIM50Q86XT4 487 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 OGFOD1Q8N543 542 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.96□□□□□ -1.46
RFC1-209ENST00000504974 SIRT1Q96EB6 747 aa5.96□□□□□ -1.46
RFC1-209ENST00000504974 USP17L15C9J2P7 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L10C9JJH3 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L13C9JLJ4 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L12C9JPN9 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L11C9JVI0 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L21D6R901 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L18D6R9N7 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L22D6RA61 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L17D6RBQ6 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L19D6RCP7 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L20D6RJB6 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 F11P03951 625 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 PDIA4P13667 645 aaKnown RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 MSX1P28360 303 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 ATP1A2P50993 1020 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 SRPK2P78362 688 aaKnown RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 USP17L24Q0WX57 530 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 CRTC2Q53ET0 693 aaPredicted RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 SVOPQ8N4V2 548 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 KLRG1Q96E93 195 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 NUCKS1Q9H1E3 243 aaKnown RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 DNAAF2Q9NVR5 837 aaKnown RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 NOVA2Q9UNW9 492 aaKnown RBP5.95□□□□□ -1.46
RFC1-209ENST00000504974 KIAA1024Q9UPX6 916 aa5.95□□□□□ -1.46
RFC1-209ENST00000504974 RBM19Q9Y4C8 960 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms