RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SIK1P57059 783 aa9.64□□□□□ -0.87
NPIPB3-203ENST00000504841 PKD1L3Q7Z443 1732 aa9.64□□□□□ -0.87
NPIPB3-203ENST00000504841 ITPK1Q13572 414 aa9.63□□□□□ -0.87
NPIPB3-203ENST00000504841 TMOD3Q9NYL9 352 aa9.63□□□□□ -0.87
NPIPB3-203ENST00000504841 BCS1LQ9Y276 419 aa9.63□□□□□ -0.87
NPIPB3-203ENST00000504841 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
NPIPB3-203ENST00000504841 PXDNLA1KZ92 1463 aa9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 TMF1P82094 1093 aa9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 CICQ96RK0 1608 aaPredicted RBP9.62□□□□□ -0.87
NPIPB3-203ENST00000504841 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 A0A0G2JLW4 131 aa9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 APLP1P51693 650 aa9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 ARHGAP27Q6ZUM4 889 aa9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 NMRK2Q9NPI5 230 aa9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 KIF24Q5T7B8 1368 aa9.61□□□□□ -0.87
NPIPB3-203ENST00000504841 N4BP2Q86UW6 1770 aaPredicted RBP9.6□□□□□ -0.87
NPIPB3-203ENST00000504841 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
NPIPB3-203ENST00000504841 FCHSD2O94868 740 aa9.6□□□□□ -0.87
NPIPB3-203ENST00000504841 C10orf71Q711Q0 1435 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 TOMM70O94826 608 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 DSG3P32926 999 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 EYA1Q99502 592 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 RTCBQ9Y3I0 505 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
NPIPB3-203ENST00000504841 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 PHKG2P15735 406 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 DPEP1P16444 411 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 HTRA3P83110 453 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 IFNL2Q8IZJ0 200 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 CARD14Q9BXL6 1004 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 CCDC87Q9NVE4 849 aa9.58□□□□□ -0.88
NPIPB3-203ENST00000504841 KIF13BQ9NQT8 1826 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 TGFB2P61812 414 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 C9orf131Q5VYM1 1079 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 KDRP35968 1356 aa9.57□□□□□ -0.88
NPIPB3-203ENST00000504841 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 ANKRD26Q9UPS8 1709 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 RFC4P35249 363 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 WDR90Q96KV7 1748 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 WASHC2AQ641Q2 1341 aa9.56□□□□□ -0.88
NPIPB3-203ENST00000504841 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 GYS1P13807 737 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 RNF181Q9P0P0 153 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
NPIPB3-203ENST00000504841 CEP350Q5VT06 3117 aa9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 ABCB7O75027 752 aa9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 EIF4A2Q14240 407 aaKnown RBP9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 SRP68Q9UHB9 627 aaKnown RBP9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 CNTNAP4Q9C0A0 1308 aa9.54□□□□□ -0.88
NPIPB3-203ENST00000504841 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 CHRNA5P30532 468 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 CABP4P57796 275 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 KLRG1Q96E93 195 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 COL5A3P25940 1745 aaPredicted RBP9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
NPIPB3-203ENST00000504841 KDM6AO15550 1401 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 HSP90AB1P08238 724 aaKnown RBP9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 RC3H1Q5TC82 1133 aaKnown RBP9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 ZNF530Q6P9A1 599 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 RRAGCQ9HB90 399 aa9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
NPIPB3-203ENST00000504841 ERVV-2B6SEH9 535 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 KCNA3P22001 575 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 CRKLP46109 303 aaKnown RBP9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 RASSF7Q02833 373 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 DDR1Q08345 913 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 FSTL1Q12841 308 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 FKBP8Q14318 412 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 PLEKHO1Q53GL0 409 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 DCAF5Q96JK2 942 aa9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
NPIPB3-203ENST00000504841 MYH14Q7Z406 1995 aaKnown RBP9.5□□□□□ -0.89
NPIPB3-203ENST00000504841 MTHFSP49914 203 aa9.5□□□□□ -0.89
NPIPB3-203ENST00000504841 POLA2Q14181 598 aa9.5□□□□□ -0.89
NPIPB3-203ENST00000504841 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms