RNA–Protein interactions for RNA: ENST00000503940.5

C5orf38-204, Transcript of chromosome 5 open reading frame 38, humanhuman

TSL 1 (best)

Gene C5orf38, Length 451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-204ENST00000503940 PER1O15534 1290 aaPredicted RBP25.74■■□□□ 1.71
C5orf38-204ENST00000503940 PHF14O94880 888 aa25.74■■□□□ 1.71
C5orf38-204ENST00000503940 ITPK1Q13572 414 aa25.74■■□□□ 1.71
C5orf38-204ENST00000503940 C4BP0C0L5 1744 aa25.74■■□□□ 1.71
C5orf38-204ENST00000503940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.73■■□□□ 1.71
C5orf38-204ENST00000503940 MTHFSP49914 203 aa25.72■■□□□ 1.71
C5orf38-204ENST00000503940 PELP1Q8IZL8 1130 aaKnown RBP25.72■■□□□ 1.71
C5orf38-204ENST00000503940 CABP4P57796 275 aa25.71■■□□□ 1.71
C5orf38-204ENST00000503940 C1orf141Q5JVX7 400 aa25.71■■□□□ 1.71
C5orf38-204ENST00000503940 SSFA2P28290 1259 aa25.7■■□□□ 1.7
C5orf38-204ENST00000503940 CC2D1BQ5T0F9 858 aaKnown RBP25.7■■□□□ 1.7
C5orf38-204ENST00000503940 RBM42Q9BTD8 480 aaKnown RBP25.7■■□□□ 1.7
C5orf38-204ENST00000503940 GNPATO15228 680 aa25.68■■□□□ 1.7
C5orf38-204ENST00000503940 SLC4A9Q96Q91 983 aa25.67■■□□□ 1.7
C5orf38-204ENST00000503940 KDRP35968 1356 aa25.67■■□□□ 1.7
C5orf38-204ENST00000503940 KDM6AO15550 1401 aaPredicted RBP25.66■■□□□ 1.7
C5orf38-204ENST00000503940 ZNF784Q8NCA9 323 aaPredicted RBP25.66■■□□□ 1.7
C5orf38-204ENST00000503940 CD2APQ9Y5K6 639 aa25.66■■□□□ 1.7
C5orf38-204ENST00000503940 UBR3Q6ZT12 1888 aa25.66■■□□□ 1.7
C5orf38-204ENST00000503940 NFATC2IPQ8NCF5 419 aa25.65■■□□□ 1.7
C5orf38-204ENST00000503940 CHD4Q14839 1912 aa25.63■■□□□ 1.69
C5orf38-204ENST00000503940 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
C5orf38-204ENST00000503940 HMOX1P09601 288 aa25.62■■□□□ 1.69
C5orf38-204ENST00000503940 RTCBQ9Y3I0 505 aaKnown RBP25.62■■□□□ 1.69
C5orf38-204ENST00000503940 GOLGB1Q14789 3259 aaKnown RBP25.61■■□□□ 1.69
C5orf38-204ENST00000503940 DIAPH1O60610 1272 aaKnown RBP25.61■■□□□ 1.69
C5orf38-204ENST00000503940 YBX3P16989 372 aaKnown RBP eCLIP25.61■■□□□ 1.69
C5orf38-204ENST00000503940 AKAP4Q5JQC9 854 aa25.61■■□□□ 1.69
C5orf38-204ENST00000503940 TRAPPC3LQ5T215 181 aa25.61■■□□□ 1.69
C5orf38-204ENST00000503940 RC3H1Q5TC82 1133 aaKnown RBP25.61■■□□□ 1.69
C5orf38-204ENST00000503940 GRIN3BO60391 1043 aa25.6■■□□□ 1.69
C5orf38-204ENST00000503940 PTCD1O75127 700 aaKnown RBP25.6■■□□□ 1.69
C5orf38-204ENST00000503940 LGR6Q9HBX8 967 aa25.58■■□□□ 1.69
C5orf38-204ENST00000503940 RPS6KA4O75676 772 aa25.57■■□□□ 1.68
C5orf38-204ENST00000503940 ARHGEF1Q92888 912 aaKnown RBP25.57■■□□□ 1.68
C5orf38-204ENST00000503940 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
C5orf38-204ENST00000503940 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
C5orf38-204ENST00000503940 RNMTO43148 476 aaKnown RBP25.54■■□□□ 1.68
C5orf38-204ENST00000503940 MMP10P09238 476 aa25.54■■□□□ 1.68
C5orf38-204ENST00000503940 ADRA2BP18089 450 aa25.54■■□□□ 1.68
C5orf38-204ENST00000503940 MTHFSDQ2M296 383 aaKnown RBP25.54■■□□□ 1.68
C5orf38-204ENST00000503940 NLGN1Q8N2Q7 840 aa25.54■■□□□ 1.68
C5orf38-204ENST00000503940 SLC52A2Q9HAB3 445 aa25.54■■□□□ 1.68
C5orf38-204ENST00000503940 ZNF831Q5JPB2 1677 aa25.53■■□□□ 1.68
C5orf38-204ENST00000503940 RFC4P35249 363 aa25.53■■□□□ 1.68
C5orf38-204ENST00000503940 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
C5orf38-204ENST00000503940 U2SURPO15042 1029 aaKnown RBP25.5■■□□□ 1.67
C5orf38-204ENST00000503940 SCN11AQ9UI33 1791 aa25.49■■□□□ 1.67
C5orf38-204ENST00000503940 GYS1P13807 737 aa25.49■■□□□ 1.67
C5orf38-204ENST00000503940 MYH14Q7Z406 1995 aaKnown RBP25.48■■□□□ 1.67
C5orf38-204ENST00000503940 SLC39A6Q13433 755 aa25.48■■□□□ 1.67
C5orf38-204ENST00000503940 WWC3Q9ULE0 1092 aa25.48■■□□□ 1.67
C5orf38-204ENST00000503940 COL5A3P25940 1745 aaPredicted RBP25.47■■□□□ 1.67
C5orf38-204ENST00000503940 DNAJC10Q8IXB1 793 aa25.46■■□□□ 1.67
C5orf38-204ENST00000503940 INTS5Q6P9B9 1019 aaKnown RBP25.45■■□□□ 1.66
C5orf38-204ENST00000503940 PARP3Q9Y6F1 533 aa25.44■■□□□ 1.66
C5orf38-204ENST00000503940 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
C5orf38-204ENST00000503940 SRP68Q9UHB9 627 aaKnown RBP25.43■■□□□ 1.66
C5orf38-204ENST00000503940 TGFB2P61812 414 aa25.42■■□□□ 1.66
C5orf38-204ENST00000503940 CFAP53Q96M91 514 aa25.42■■□□□ 1.66
C5orf38-204ENST00000503940 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
C5orf38-204ENST00000503940 CCDC87Q9NVE4 849 aa25.41■■□□□ 1.66
C5orf38-204ENST00000503940 CYP19A1P11511 503 aaPredicted RBP25.4■■□□□ 1.66
C5orf38-204ENST00000503940 MRC1P22897 1456 aa25.4■■□□□ 1.66
C5orf38-204ENST00000503940 USP42Q9H9J4 1324 aaKnown RBP25.39■■□□□ 1.66
C5orf38-204ENST00000503940 A0A0G2JLW4 131 aa25.39■■□□□ 1.66
C5orf38-204ENST00000503940 GNAT3A8MTJ3 354 aa25.39■■□□□ 1.66
C5orf38-204ENST00000503940 FKBP8Q14318 412 aa25.39■■□□□ 1.66
C5orf38-204ENST00000503940 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
C5orf38-204ENST00000503940 TJP1Q07157 1748 aa25.39■■□□□ 1.65
C5orf38-204ENST00000503940 CICQ96RK0 1608 aaPredicted RBP25.38■■□□□ 1.65
C5orf38-204ENST00000503940 C1QTNF8P60827 252 aa25.38■■□□□ 1.65
C5orf38-204ENST00000503940 VSIG10Q8N0Z9 540 aa25.38■■□□□ 1.65
C5orf38-204ENST00000503940 NUDCQ9Y266 331 aa25.37■■□□□ 1.65
C5orf38-204ENST00000503940 VIRMAQ69YN4 1812 aaKnown RBP25.36■■□□□ 1.65
C5orf38-204ENST00000503940 ZPR1O75312 459 aa25.36■■□□□ 1.65
C5orf38-204ENST00000503940 GIGYF1O75420 1035 aaPredicted RBP25.36■■□□□ 1.65
C5orf38-204ENST00000503940 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
C5orf38-204ENST00000503940 TEFQ10587 303 aa25.36■■□□□ 1.65
C5orf38-204ENST00000503940 TTC5Q8N0Z6 440 aa25.36■■□□□ 1.65
C5orf38-204ENST00000503940 SOS1Q07889 1333 aaPredicted RBP25.36■■□□□ 1.65
C5orf38-204ENST00000503940 PXDNLA1KZ92 1463 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 DPEP1P16444 411 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 PRKAR2BP31323 418 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 USPL1Q5W0Q7 1092 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 PHACTR3Q96KR7 559 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 C10orf71Q711Q0 1435 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 ADAMTS7Q9UKP4 1686 aa25.35■■□□□ 1.65
C5orf38-204ENST00000503940 C4AP0C0L4 1744 aa25.34■■□□□ 1.65
C5orf38-204ENST00000503940 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
C5orf38-204ENST00000503940 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
C5orf38-204ENST00000503940 ZBTB1Q9Y2K1 713 aa25.34■■□□□ 1.65
C5orf38-204ENST00000503940 KCPQ6ZWJ8 1503 aa25.33■■□□□ 1.65
C5orf38-204ENST00000503940 TM4SF1P30408 202 aa25.33■■□□□ 1.65
C5orf38-204ENST00000503940 DDR1Q08345 913 aa25.33■■□□□ 1.65
C5orf38-204ENST00000503940 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.64
C5orf38-204ENST00000503940 U2AF1L5P0DN76 240 aaPredicted RBP25.32■■□□□ 1.64
C5orf38-204ENST00000503940 U2AF1Q01081 240 aaKnown RBP eCLIP25.32■■□□□ 1.64
C5orf38-204ENST00000503940 ZNF790Q6PG37 636 aa25.32■■□□□ 1.64
C5orf38-204ENST00000503940 ATP10DQ9P241 1426 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms