RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FCHSD2O94868 740 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 HTRA3P83110 453 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 TMOD3Q9NYL9 352 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 PLEKHG2Q9H7P9 1386 aa22.23■■□□□ 1.15
PDLIM7-210ENST00000503827 SLC24A1O60721 1099 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 ITPK1Q13572 414 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 KIF20BQ96Q89 1820 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
PDLIM7-210ENST00000503827 TMF1P82094 1093 aa22.21■■□□□ 1.15
PDLIM7-210ENST00000503827 CCDC87Q9NVE4 849 aa22.21■■□□□ 1.15
PDLIM7-210ENST00000503827 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
PDLIM7-210ENST00000503827 DPEP1P16444 411 aa22.2■■□□□ 1.14
PDLIM7-210ENST00000503827 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
PDLIM7-210ENST00000503827 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
PDLIM7-210ENST00000503827 ASAP1Q9ULH1 1129 aa22.2■■□□□ 1.14
PDLIM7-210ENST00000503827 PRELPP51888 382 aa22.19■■□□□ 1.14
PDLIM7-210ENST00000503827 TESK2Q96S53 571 aa22.19■■□□□ 1.14
PDLIM7-210ENST00000503827 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-210ENST00000503827 KDM2BQ8NHM5 1336 aa22.19■■□□□ 1.14
PDLIM7-210ENST00000503827 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-210ENST00000503827 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
PDLIM7-210ENST00000503827 KCPQ6ZWJ8 1503 aa22.16■■□□□ 1.14
PDLIM7-210ENST00000503827 PARP3Q9Y6F1 533 aa22.16■■□□□ 1.14
PDLIM7-210ENST00000503827 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
PDLIM7-210ENST00000503827 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
PDLIM7-210ENST00000503827 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.14
PDLIM7-210ENST00000503827 ADRA2BP18089 450 aa22.14■■□□□ 1.13
PDLIM7-210ENST00000503827 RRAGCQ9HB90 399 aa22.14■■□□□ 1.13
PDLIM7-210ENST00000503827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.14■■□□□ 1.13
PDLIM7-210ENST00000503827 SBF1O95248 1867 aa22.13■■□□□ 1.13
PDLIM7-210ENST00000503827 IFNL2Q8IZJ0 200 aa22.13■■□□□ 1.13
PDLIM7-210ENST00000503827 ARHGEF1Q92888 912 aaKnown RBP22.13■■□□□ 1.13
PDLIM7-210ENST00000503827 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
PDLIM7-210ENST00000503827 GYS1P13807 737 aa22.12■■□□□ 1.13
PDLIM7-210ENST00000503827 KCNA3P22001 575 aa22.12■■□□□ 1.13
PDLIM7-210ENST00000503827 RFC4P35249 363 aa22.12■■□□□ 1.13
PDLIM7-210ENST00000503827 RNF181Q9P0P0 153 aa22.12■■□□□ 1.13
PDLIM7-210ENST00000503827 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
PDLIM7-210ENST00000503827 PHKG2P15735 406 aa22.11■■□□□ 1.13
PDLIM7-210ENST00000503827 RC3H1Q5TC82 1133 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-210ENST00000503827 SMC1BQ8NDV3 1235 aa22.11■■□□□ 1.13
PDLIM7-210ENST00000503827 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
PDLIM7-210ENST00000503827 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
PDLIM7-210ENST00000503827 KDRP35968 1356 aa22.1■■□□□ 1.13
PDLIM7-210ENST00000503827 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
PDLIM7-210ENST00000503827 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
PDLIM7-210ENST00000503827 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
PDLIM7-210ENST00000503827 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
PDLIM7-210ENST00000503827 RPS6KA4O75676 772 aa22.08■■□□□ 1.13
PDLIM7-210ENST00000503827 ANKRD26Q9UPS8 1709 aa22.08■■□□□ 1.12
PDLIM7-210ENST00000503827 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
PDLIM7-210ENST00000503827 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
PDLIM7-210ENST00000503827 EYA1Q99502 592 aa22.06■■□□□ 1.12
PDLIM7-210ENST00000503827 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
PDLIM7-210ENST00000503827 HSPA1AP0DMV8 641 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-210ENST00000503827 HSPA1BP0DMV9 641 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-210ENST00000503827 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
PDLIM7-210ENST00000503827 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
PDLIM7-210ENST00000503827 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
PDLIM7-210ENST00000503827 CHRNA5P30532 468 aa22■■□□□ 1.11
PDLIM7-210ENST00000503827 PCNTO95613 3336 aa22■■□□□ 1.11
PDLIM7-210ENST00000503827 CCDC88AQ3V6T2 1871 aa21.99■■□□□ 1.11
PDLIM7-210ENST00000503827 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-210ENST00000503827 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-210ENST00000503827 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
PDLIM7-210ENST00000503827 DDR1Q08345 913 aa21.98■■□□□ 1.11
PDLIM7-210ENST00000503827 FKBP8Q14318 412 aa21.98■■□□□ 1.11
PDLIM7-210ENST00000503827 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-210ENST00000503827 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-210ENST00000503827 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
PDLIM7-210ENST00000503827 GLTPD2A6NH11 291 aa21.96■■□□□ 1.11
PDLIM7-210ENST00000503827 CRKLP46109 303 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-210ENST00000503827 CABP4P57796 275 aa21.95■■□□□ 1.1
PDLIM7-210ENST00000503827 RASSF7Q02833 373 aa21.95■■□□□ 1.1
PDLIM7-210ENST00000503827 KDM6AO15550 1401 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-210ENST00000503827 TIAM2Q8IVF5 1701 aa21.94■■□□□ 1.1
PDLIM7-210ENST00000503827 LMNB1P20700 586 aa21.94■■□□□ 1.1
PDLIM7-210ENST00000503827 POLRMTO00411 1230 aaKnown RBP21.93■■□□□ 1.1
PDLIM7-210ENST00000503827 PTCD1O75127 700 aaKnown RBP21.93■■□□□ 1.1
PDLIM7-210ENST00000503827 POLKQ9UBT6 870 aa21.93■■□□□ 1.1
PDLIM7-210ENST00000503827 AFDNP55196 1824 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-210ENST00000503827 DLEC1Q9Y238 1755 aa21.92■■□□□ 1.1
PDLIM7-210ENST00000503827 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-210ENST00000503827 PLEKHO1Q53GL0 409 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-210ENST00000503827 TJP1Q07157 1748 aa21.92■■□□□ 1.1
PDLIM7-210ENST00000503827 TM4SF1P30408 202 aa21.91■■□□□ 1.1
PDLIM7-210ENST00000503827 ZPR1O75312 459 aa21.9■■□□□ 1.1
PDLIM7-210ENST00000503827 ADAMTS7Q9UKP4 1686 aa21.89■■□□□ 1.1
PDLIM7-210ENST00000503827 ZNF530Q6P9A1 599 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-210ENST00000503827 MTHFSP49914 203 aa21.88■■□□□ 1.09
PDLIM7-210ENST00000503827 AMOTQ4VCS5 1084 aa21.88■■□□□ 1.09
PDLIM7-210ENST00000503827 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
PDLIM7-210ENST00000503827 DPY19L2Q6NUT2 758 aa21.87■■□□□ 1.09
PDLIM7-210ENST00000503827 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
PDLIM7-210ENST00000503827 C1orf141Q5JVX7 400 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms