RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
SCLT1-206ENST00000503565 DNMT3LQ9UJW3 386 aa8.06□□□□□ -1.12
SCLT1-206ENST00000503565 E9PSI1 815 aa8.05□□□□□ -1.12
SCLT1-206ENST00000503565 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
SCLT1-206ENST00000503565 RASA1P20936 1047 aa8.04□□□□□ -1.12
SCLT1-206ENST00000503565 SLFNL1Q499Z3 407 aa8.04□□□□□ -1.12
SCLT1-206ENST00000503565 RNF135Q8IUD6 432 aa8.04□□□□□ -1.12
SCLT1-206ENST00000503565 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
SCLT1-206ENST00000503565 FIGNL2A6NMB9 653 aa8.03□□□□□ -1.12
SCLT1-206ENST00000503565 STAU1O95793 577 aaKnown RBP8.03□□□□□ -1.12
SCLT1-206ENST00000503565 PLPP7Q8NBV4 271 aa8.03□□□□□ -1.12
SCLT1-206ENST00000503565 CLP1Q92989 425 aaKnown RBP8.03□□□□□ -1.12
SCLT1-206ENST00000503565 A0A1W2PRU2 124 aa8.02□□□□□ -1.13
SCLT1-206ENST00000503565 TTLL8A6PVC2 850 aa8.02□□□□□ -1.13
SCLT1-206ENST00000503565 ATP5J2-PTCD1G3V325 749 aa8.02□□□□□ -1.13
SCLT1-206ENST00000503565 UPP2O95045 317 aa8.02□□□□□ -1.13
SCLT1-206ENST00000503565 NFX1Q12986 1120 aaKnown RBP8.02□□□□□ -1.13
SCLT1-206ENST00000503565 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
SCLT1-206ENST00000503565 DOLKQ9UPQ8 538 aa8.02□□□□□ -1.13
SCLT1-206ENST00000503565 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
SCLT1-206ENST00000503565 ANKMY2Q8IV38 441 aa8.01□□□□□ -1.13
SCLT1-206ENST00000503565 RNF217Q8TC41 542 aa8.01□□□□□ -1.13
SCLT1-206ENST00000503565 FAM200AQ8TCP9 573 aa8.01□□□□□ -1.13
SCLT1-206ENST00000503565 ARID4AP29374 1257 aaPredicted RBP8□□□□□ -1.13
SCLT1-206ENST00000503565 CLDN10P78369 228 aa8□□□□□ -1.13
SCLT1-206ENST00000503565 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
SCLT1-206ENST00000503565 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
SCLT1-206ENST00000503565 DNAJC14Q6Y2X3 702 aaPredicted RBP8□□□□□ -1.13
SCLT1-206ENST00000503565 HRH3Q9Y5N1 445 aa8□□□□□ -1.13
SCLT1-206ENST00000503565 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
SCLT1-206ENST00000503565 MAN1A2O60476 641 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 IL2RAP01589 272 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 SCNN1AP37088 669 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 DPYDQ12882 1025 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 OGFOD1Q8N543 542 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 RAB6BQ9NRW1 208 aa7.99□□□□□ -1.13
SCLT1-206ENST00000503565 SOWAHDA6NJG2 315 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
SCLT1-206ENST00000503565 IGSF3O75054 1194 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 DKK1O94907 266 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 SERPINB4P48594 390 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 VEGFBP49765 207 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
SCLT1-206ENST00000503565 MAP7D1Q3KQU3 841 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 CYP2U1Q7Z449 544 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 ARHGEF10LQ9HCE6 1279 aa7.98□□□□□ -1.13
SCLT1-206ENST00000503565 POLMQ9NP87 494 aaPredicted RBP7.98□□□□□ -1.13
SCLT1-206ENST00000503565 RBM47A0AV96 593 aaKnown RBP7.97□□□□□ -1.13
SCLT1-206ENST00000503565 USP4Q13107 963 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 CLN3Q13286 438 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 EML3Q32P44 896 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
SCLT1-206ENST00000503565 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
SCLT1-206ENST00000503565 KIAA1024Q9UPX6 916 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 PCDHGA11Q9Y5H2 935 aa7.97□□□□□ -1.13
SCLT1-206ENST00000503565 SENP3-EIF4A1A0A087X0R7 540 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 MEN1O00255 615 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 MYCP01106 439 aaPredicted RBP7.96□□□□□ -1.14
SCLT1-206ENST00000503565 GNRH1P01148 92 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 SCNN1DP51172 638 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 XAGE2Q96GT9 111 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 ETNK1Q9HBU6 452 aa7.96□□□□□ -1.14
SCLT1-206ENST00000503565 DNAAF2Q9NVR5 837 aaKnown RBP7.96□□□□□ -1.14
SCLT1-206ENST00000503565 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
SCLT1-206ENST00000503565 PTSQ03393 145 aa7.95□□□□□ -1.14
SCLT1-206ENST00000503565 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
SCLT1-206ENST00000503565 SLC35F4A4IF30 521 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 H3BM21 787 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 CNKSR1Q969H4 720 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 ESYT1Q9BSJ8 1104 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
SCLT1-206ENST00000503565 NOD1Q9Y239 953 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 ERBB4Q15303 1308 aa7.94□□□□□ -1.14
SCLT1-206ENST00000503565 TMEM229AB2RXF0 380 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 CENPCQ03188 943 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 OCLNQ16625 522 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 PRICKLE2Q7Z3G6 844 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 SIX5Q8N196 739 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
SCLT1-206ENST00000503565 LOC105371045A0A1W2PR82 267 aa7.92□□□□□ -1.14
SCLT1-206ENST00000503565 WFS1O76024 890 aa7.92□□□□□ -1.14
SCLT1-206ENST00000503565 RHOQP17081 205 aa7.92□□□□□ -1.14
SCLT1-206ENST00000503565 GPC1P35052 558 aa7.92□□□□□ -1.14
SCLT1-206ENST00000503565 ATP1A2P50993 1020 aa7.92□□□□□ -1.14
SCLT1-206ENST00000503565 PRMT3O60678 531 aa7.91□□□□□ -1.14
SCLT1-206ENST00000503565 GTF2IP78347 998 aa7.91□□□□□ -1.14
SCLT1-206ENST00000503565 LYSMD3Q7Z3D4 306 aa7.91□□□□□ -1.14
SCLT1-206ENST00000503565 NPAS3Q8IXF0 933 aa7.91□□□□□ -1.14
SCLT1-206ENST00000503565 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
SCLT1-206ENST00000503565 IGSF5Q9NSI5 407 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms