RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 WDR17Q8IZU2 1322 aa27.88■■■□□ 2.05
PTPN13-205ENST00000502971 STK31Q9BXU1 1019 aa27.88■■■□□ 2.05
PTPN13-205ENST00000502971 MEGF6O75095 1541 aa27.88■■■□□ 2.05
PTPN13-205ENST00000502971 ZBTB7BO15156 539 aaPredicted RBP27.87■■■□□ 2.05
PTPN13-205ENST00000502971 HSPA1LP34931 641 aa27.87■■■□□ 2.05
PTPN13-205ENST00000502971 HDAC1Q13547 482 aaPredicted RBP27.87■■■□□ 2.05
PTPN13-205ENST00000502971 CHMP4AQ9BY43 222 aa27.87■■■□□ 2.05
PTPN13-205ENST00000502971 SPATA31A6Q5VVP1 1343 aa27.86■■■□□ 2.05
PTPN13-205ENST00000502971 BTBD11A6QL63 1104 aa27.86■■■□□ 2.05
PTPN13-205ENST00000502971 HOXB7P09629 217 aa27.86■■■□□ 2.05
PTPN13-205ENST00000502971 COL5A2P05997 1499 aaPredicted RBP27.86■■■□□ 2.05
PTPN13-205ENST00000502971 RGS12O14924 1447 aa27.86■■■□□ 2.05
PTPN13-205ENST00000502971 EIF4A1P60842 406 aaKnown RBP27.85■■■□□ 2.05
PTPN13-205ENST00000502971 INTS3Q68E01 1043 aaKnown RBP27.85■■■□□ 2.05
PTPN13-205ENST00000502971 PKD1L3Q7Z443 1732 aa27.83■■■□□ 2.05
PTPN13-205ENST00000502971 PHKG2P15735 406 aa27.83■■■□□ 2.05
PTPN13-205ENST00000502971 IFNL2Q8IZJ0 200 aa27.83■■■□□ 2.05
PTPN13-205ENST00000502971 SKAP1Q86WV1 359 aa27.82■■■□□ 2.04
PTPN13-205ENST00000502971 SIPA1L3O60292 1781 aaPredicted RBP27.81■■■□□ 2.04
PTPN13-205ENST00000502971 COL14A1Q05707 1796 aaKnown RBP27.81■■■□□ 2.04
PTPN13-205ENST00000502971 CACNA1FO60840 1977 aa27.81■■■□□ 2.04
PTPN13-205ENST00000502971 TOM1L2Q6ZVM7 507 aa27.81■■■□□ 2.04
PTPN13-205ENST00000502971 PARP4Q9UKK3 1724 aaKnown RBP27.8■■■□□ 2.04
PTPN13-205ENST00000502971 HSP90AB1P08238 724 aaKnown RBP27.78■■■□□ 2.04
PTPN13-205ENST00000502971 CARD10Q9BWT7 1032 aa27.78■■■□□ 2.04
PTPN13-205ENST00000502971 SCN11AQ9UI33 1791 aa27.78■■■□□ 2.04
PTPN13-205ENST00000502971 HDGFL1Q5TGJ6 251 aa27.78■■■□□ 2.04
PTPN13-205ENST00000502971 G2E3Q7L622 706 aa27.78■■■□□ 2.04
PTPN13-205ENST00000502971 KDM6AO15550 1401 aaPredicted RBP27.77■■■□□ 2.04
PTPN13-205ENST00000502971 NUTM2BA6NNL0 878 aaPredicted RBP27.76■■■□□ 2.03
PTPN13-205ENST00000502971 NUTM2EB1AL46 878 aaPredicted RBP27.76■■■□□ 2.03
PTPN13-205ENST00000502971 KCNQ3O43525 872 aa27.76■■■□□ 2.03
PTPN13-205ENST00000502971 NUTM2AQ8IVF1 878 aaPredicted RBP27.76■■■□□ 2.03
PTPN13-205ENST00000502971 DCAF5Q96JK2 942 aa27.76■■■□□ 2.03
PTPN13-205ENST00000502971 PDE4AP27815 886 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 EVA1CP58658 441 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 FLIIQ13045 1269 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 ADAMTS2O95450 1211 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 RGS3P49796 1198 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 SLC52A2Q9HAB3 445 aa27.75■■■□□ 2.03
PTPN13-205ENST00000502971 HEG1Q9ULI3 1381 aa27.74■■■□□ 2.03
PTPN13-205ENST00000502971 CYP27B1O15528 508 aa27.74■■■□□ 2.03
PTPN13-205ENST00000502971 CCT4P50991 539 aaKnown RBP27.74■■■□□ 2.03
PTPN13-205ENST00000502971 BTG4Q9NY30 223 aa27.74■■■□□ 2.03
PTPN13-205ENST00000502971 SMC5Q8IY18 1101 aa27.73■■■□□ 2.03
PTPN13-205ENST00000502971 BACH2Q9BYV9 841 aa27.73■■■□□ 2.03
PTPN13-205ENST00000502971 PDZRN3Q9UPQ7 1066 aa27.73■■■□□ 2.03
PTPN13-205ENST00000502971 NECTIN2Q92692 538 aa27.72■■■□□ 2.03
PTPN13-205ENST00000502971 MRC1P22897 1456 aa27.72■■■□□ 2.03
PTPN13-205ENST00000502971 STRN4Q9NRL3 753 aa27.71■■■□□ 2.03
PTPN13-205ENST00000502971 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.03
PTPN13-205ENST00000502971 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.03
PTPN13-205ENST00000502971 IL2RBP14784 551 aa27.7■■■□□ 2.03
PTPN13-205ENST00000502971 FKBP5Q13451 457 aaPredicted RBP27.7■■■□□ 2.03
PTPN13-205ENST00000502971 LARP1Q6PKG0 1096 aaKnown RBP27.7■■■□□ 2.03
PTPN13-205ENST00000502971 ZCRB1Q8TBF4 217 aaKnown RBP27.7■■■□□ 2.03
PTPN13-205ENST00000502971 GIGYF1O75420 1035 aaPredicted RBP27.69■■■□□ 2.02
PTPN13-205ENST00000502971 EIF2S2P20042 333 aaKnown RBP27.69■■■□□ 2.02
PTPN13-205ENST00000502971 C1orf115Q9H7X2 142 aa27.68■■■□□ 2.02
PTPN13-205ENST00000502971 F6X3S4 739 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 PXDNLA1KZ92 1463 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 SLIT2O94813 1529 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 ZNF790Q6PG37 636 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 NFATC2IPQ8NCF5 419 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 GCC1Q96CN9 775 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 NWD2Q9ULI1 1742 aa27.67■■■□□ 2.02
PTPN13-205ENST00000502971 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
PTPN13-205ENST00000502971 FAM161AQ3B820 660 aa27.66■■■□□ 2.02
PTPN13-205ENST00000502971 SLC4A10Q6U841 1118 aa27.66■■■□□ 2.02
PTPN13-205ENST00000502971 LRP6O75581 1613 aa27.65■■■□□ 2.02
PTPN13-205ENST00000502971 CHPF2Q9P2E5 772 aa27.64■■■□□ 2.02
PTPN13-205ENST00000502971 DBF4Q9UBU7 674 aaPredicted RBP27.64■■■□□ 2.02
PTPN13-205ENST00000502971 NKX1-1Q15270 411 aaPredicted RBP27.63■■■□□ 2.01
PTPN13-205ENST00000502971 SIRT2Q8IXJ6 389 aa27.63■■■□□ 2.01
PTPN13-205ENST00000502971 RPAP2Q8IXW5 612 aaPredicted RBP27.63■■■□□ 2.01
PTPN13-205ENST00000502971 FNBP4Q8N3X1 1017 aaPredicted RBP27.63■■■□□ 2.01
PTPN13-205ENST00000502971 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
PTPN13-205ENST00000502971 N4BP2Q86UW6 1770 aaPredicted RBP27.62■■■□□ 2.01
PTPN13-205ENST00000502971 CABP4P57796 275 aa27.62■■■□□ 2.01
PTPN13-205ENST00000502971 PHAXQ9H814 394 aaKnown RBP27.62■■■□□ 2.01
PTPN13-205ENST00000502971 C8orf37Q96NL8 207 aa27.61■■■□□ 2.01
PTPN13-205ENST00000502971 MEIS3Q99687 375 aa27.61■■■□□ 2.01
PTPN13-205ENST00000502971 NUCB1Q02818 461 aa27.61■■■□□ 2.01
PTPN13-205ENST00000502971 ANKRD44Q8N8A2 993 aa27.61■■■□□ 2.01
PTPN13-205ENST00000502971 ERVV-2B6SEH9 535 aa27.6■■■□□ 2.01
PTPN13-205ENST00000502971 SLC39A6Q13433 755 aa27.6■■■□□ 2.01
PTPN13-205ENST00000502971 MEX3CQ5U5Q3 659 aaKnown RBP27.59■■■□□ 2.01
PTPN13-205ENST00000502971 UNC5CLQ8IV45 518 aa27.59■■■□□ 2.01
PTPN13-205ENST00000502971 TTC5Q8N0Z6 440 aa27.59■■■□□ 2.01
PTPN13-205ENST00000502971 ATP10DQ9P241 1426 aa27.59■■■□□ 2.01
PTPN13-205ENST00000502971 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
PTPN13-205ENST00000502971 SHANK3Q9BYB0 1731 aa27.59■■■□□ 2.01
PTPN13-205ENST00000502971 C8orf34Q49A92 452 aa27.58■■■□□ 2.01
PTPN13-205ENST00000502971 GNAI3P08754 354 aa27.57■■■□□ 2
PTPN13-205ENST00000502971 CEP85Q6P2H3 762 aa27.57■■■□□ 2
PTPN13-205ENST00000502971 HYPKQ9NX55 129 aa27.57■■■□□ 2
PTPN13-205ENST00000502971 THRAP3Q9Y2W1 955 aaKnown RBP27.56■■■□□ 2
PTPN13-205ENST00000502971 WNK3Q9BYP7 1800 aa27.56■■■□□ 2
PTPN13-205ENST00000502971 CHD1LQ86WJ1 897 aa27.55■■■□□ 2
PTPN13-205ENST00000502971 FMNL2Q96PY5 1086 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms