RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 NMRK2Q9NPI5 230 aa25.23■■□□□ 1.63
HERC6-204ENST00000502870 C10orf71Q711Q0 1435 aa25.22■■□□□ 1.63
HERC6-204ENST00000502870 TONSLQ96HA7 1378 aa25.22■■□□□ 1.63
HERC6-204ENST00000502870 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
HERC6-204ENST00000502870 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
HERC6-204ENST00000502870 KLRG1Q96E93 195 aa25.21■■□□□ 1.63
HERC6-204ENST00000502870 ARFGEF1Q9Y6D6 1849 aa25.21■■□□□ 1.63
HERC6-204ENST00000502870 A0A0G2JLW4 131 aa25.2■■□□□ 1.62
HERC6-204ENST00000502870 FSTL1Q12841 308 aa25.2■■□□□ 1.62
HERC6-204ENST00000502870 CCDC87Q9NVE4 849 aa25.2■■□□□ 1.62
HERC6-204ENST00000502870 FCHSD2O94868 740 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 TMF1P82094 1093 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 ITPK1Q13572 414 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 RTCBQ9Y3I0 505 aaKnown RBP25.19■■□□□ 1.62
HERC6-204ENST00000502870 C4AP0C0L4 1744 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
HERC6-204ENST00000502870 JMYQ8N9B5 988 aa25.18■■□□□ 1.62
HERC6-204ENST00000502870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.18■■□□□ 1.62
HERC6-204ENST00000502870 KDM2BQ8NHM5 1336 aa25.17■■□□□ 1.62
HERC6-204ENST00000502870 ADRA2BP18089 450 aa25.17■■□□□ 1.62
HERC6-204ENST00000502870 ASAP1Q9ULH1 1129 aa25.17■■□□□ 1.62
HERC6-204ENST00000502870 ZNF831Q5JPB2 1677 aa25.17■■□□□ 1.62
HERC6-204ENST00000502870 DPEP1P16444 411 aa25.15■■□□□ 1.62
HERC6-204ENST00000502870 IFNL2Q8IZJ0 200 aa25.15■■□□□ 1.62
HERC6-204ENST00000502870 TNRC6CQ9HCJ0 1690 aaKnown RBP25.14■■□□□ 1.62
HERC6-204ENST00000502870 COL13A1Q5TAT6 717 aaPredicted RBP25.14■■□□□ 1.62
HERC6-204ENST00000502870 C9orf131Q5VYM1 1079 aa25.14■■□□□ 1.62
HERC6-204ENST00000502870 PARP3Q9Y6F1 533 aa25.14■■□□□ 1.62
HERC6-204ENST00000502870 ANKRD26Q9UPS8 1709 aa25.13■■□□□ 1.61
HERC6-204ENST00000502870 ATG3Q9NT62 314 aa25.12■■□□□ 1.61
HERC6-204ENST00000502870 RFC4P35249 363 aa25.11■■□□□ 1.61
HERC6-204ENST00000502870 TNS4Q8IZW8 715 aa25.11■■□□□ 1.61
HERC6-204ENST00000502870 EMILIN1Q9Y6C2 1016 aa25.11■■□□□ 1.61
HERC6-204ENST00000502870 COL5A3P25940 1745 aaPredicted RBP25.11■■□□□ 1.61
HERC6-204ENST00000502870 KDRP35968 1356 aa25.1■■□□□ 1.61
HERC6-204ENST00000502870 PPM1GO15355 546 aaPredicted RBP25.1■■□□□ 1.61
HERC6-204ENST00000502870 CAPN15O75808 1086 aa25.1■■□□□ 1.61
HERC6-204ENST00000502870 PHKG2P15735 406 aa25.1■■□□□ 1.61
HERC6-204ENST00000502870 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
HERC6-204ENST00000502870 RC3H1Q5TC82 1133 aaKnown RBP25.1■■□□□ 1.61
HERC6-204ENST00000502870 PIM2Q9P1W9 311 aa25.1■■□□□ 1.61
HERC6-204ENST00000502870 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
HERC6-204ENST00000502870 GYS1P13807 737 aa25.08■■□□□ 1.61
HERC6-204ENST00000502870 HTRA3P83110 453 aa25.08■■□□□ 1.61
HERC6-204ENST00000502870 ARHGEF1Q92888 912 aaKnown RBP25.08■■□□□ 1.61
HERC6-204ENST00000502870 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.6
HERC6-204ENST00000502870 PRELPP51888 382 aa25.07■■□□□ 1.6
HERC6-204ENST00000502870 DALRD3Q5D0E6 543 aaKnown RBP25.07■■□□□ 1.6
HERC6-204ENST00000502870 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
HERC6-204ENST00000502870 SMC1BQ8NDV3 1235 aa25.06■■□□□ 1.6
HERC6-204ENST00000502870 DCAF5Q96JK2 942 aa25.06■■□□□ 1.6
HERC6-204ENST00000502870 EYA1Q99502 592 aa25.06■■□□□ 1.6
HERC6-204ENST00000502870 RBM42Q9BTD8 480 aaKnown RBP25.06■■□□□ 1.6
HERC6-204ENST00000502870 RNF181Q9P0P0 153 aa25.06■■□□□ 1.6
HERC6-204ENST00000502870 SBF1O95248 1867 aa25.05■■□□□ 1.6
HERC6-204ENST00000502870 RPS6KA4O75676 772 aa25.05■■□□□ 1.6
HERC6-204ENST00000502870 ERVV-2B6SEH9 535 aa25.04■■□□□ 1.6
HERC6-204ENST00000502870 KCNA3P22001 575 aa25.04■■□□□ 1.6
HERC6-204ENST00000502870 HSP90AB1P08238 724 aaKnown RBP25.03■■□□□ 1.6
HERC6-204ENST00000502870 RRAGCQ9HB90 399 aa25.03■■□□□ 1.6
HERC6-204ENST00000502870 PCNTO95613 3336 aa25.02■■□□□ 1.6
HERC6-204ENST00000502870 ZC3H4Q9UPT8 1303 aaKnown RBP25.02■■□□□ 1.6
HERC6-204ENST00000502870 MYH14Q7Z406 1995 aaKnown RBP25.02■■□□□ 1.6
HERC6-204ENST00000502870 SLC4A9Q96Q91 983 aa25■■□□□ 1.59
HERC6-204ENST00000502870 CARD14Q9BXL6 1004 aa24.96■■□□□ 1.59
HERC6-204ENST00000502870 CABP4P57796 275 aa24.95■■□□□ 1.58
HERC6-204ENST00000502870 USP42Q9H9J4 1324 aaKnown RBP24.94■■□□□ 1.58
HERC6-204ENST00000502870 PLEKHO1Q53GL0 409 aaPredicted RBP24.93■■□□□ 1.58
HERC6-204ENST00000502870 HSPA1AP0DMV8 641 aaKnown RBP24.92■■□□□ 1.58
HERC6-204ENST00000502870 HSPA1BP0DMV9 641 aaKnown RBP24.92■■□□□ 1.58
HERC6-204ENST00000502870 VEGFAP15692 232 aaPredicted RBP24.92■■□□□ 1.58
HERC6-204ENST00000502870 CHRNA5P30532 468 aa24.92■■□□□ 1.58
HERC6-204ENST00000502870 CRKLP46109 303 aaKnown RBP24.92■■□□□ 1.58
HERC6-204ENST00000502870 DDR1Q08345 913 aa24.92■■□□□ 1.58
HERC6-204ENST00000502870 FKBP8Q14318 412 aa24.92■■□□□ 1.58
HERC6-204ENST00000502870 POLKQ9UBT6 870 aa24.92■■□□□ 1.58
HERC6-204ENST00000502870 EIF4A2Q14240 407 aaKnown RBP24.91■■□□□ 1.58
HERC6-204ENST00000502870 AMOTQ4VCS5 1084 aa24.9■■□□□ 1.58
HERC6-204ENST00000502870 SRP68Q9UHB9 627 aaKnown RBP24.9■■□□□ 1.58
HERC6-204ENST00000502870 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.58
HERC6-204ENST00000502870 PTCD1O75127 700 aaKnown RBP24.89■■□□□ 1.58
HERC6-204ENST00000502870 LMNB1P20700 586 aa24.89■■□□□ 1.58
HERC6-204ENST00000502870 ZNF530Q6P9A1 599 aaPredicted RBP24.89■■□□□ 1.58
HERC6-204ENST00000502870 GLTPD2A6NH11 291 aa24.88■■□□□ 1.57
HERC6-204ENST00000502870 TJP1Q07157 1748 aa24.88■■□□□ 1.57
HERC6-204ENST00000502870 TIAM2Q8IVF5 1701 aa24.88■■□□□ 1.57
HERC6-204ENST00000502870 POLRMTO00411 1230 aaKnown RBP24.87■■□□□ 1.57
HERC6-204ENST00000502870 ZPR1O75312 459 aa24.87■■□□□ 1.57
HERC6-204ENST00000502870 DLEC1Q9Y238 1755 aa24.87■■□□□ 1.57
HERC6-204ENST00000502870 CCDC88AQ3V6T2 1871 aa24.87■■□□□ 1.57
HERC6-204ENST00000502870 MTHFSP49914 203 aa24.86■■□□□ 1.57
HERC6-204ENST00000502870 C1orf141Q5JVX7 400 aa24.86■■□□□ 1.57
HERC6-204ENST00000502870 RASSF7Q02833 373 aa24.85■■□□□ 1.57
HERC6-204ENST00000502870 AFDNP55196 1824 aaKnown RBP24.84■■□□□ 1.57
HERC6-204ENST00000502870 TM4SF1P30408 202 aa24.84■■□□□ 1.57
HERC6-204ENST00000502870 ADAMTS7Q9UKP4 1686 aa24.83■■□□□ 1.57
HERC6-204ENST00000502870 NFATC2IPQ8NCF5 419 aa24.81■■□□□ 1.56
HERC6-204ENST00000502870 NRXN2Q9P2S2 1712 aa24.81■■□□□ 1.56
HERC6-204ENST00000502870 TNNT2P45379 298 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms