RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 G2E3Q7L622 706 aa23.42■■□□□ 1.34
PLXND1-202ENST00000501038 PKD1L3Q7Z443 1732 aa23.42■■□□□ 1.34
PLXND1-202ENST00000501038 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
PLXND1-202ENST00000501038 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
PLXND1-202ENST00000501038 MEGF6O75095 1541 aa23.41■■□□□ 1.34
PLXND1-202ENST00000501038 C1orf115Q9H7X2 142 aa23.41■■□□□ 1.34
PLXND1-202ENST00000501038 HOXB7P09629 217 aa23.4■■□□□ 1.34
PLXND1-202ENST00000501038 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
PLXND1-202ENST00000501038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
PLXND1-202ENST00000501038 SPG7Q9UQ90 795 aa23.39■■□□□ 1.33
PLXND1-202ENST00000501038 CHMP4AQ9BY43 222 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 MSH5O43196 834 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 FLIIQ13045 1269 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
PLXND1-202ENST00000501038 PARP4Q9UKK3 1724 aaKnown RBP23.37■■□□□ 1.33
PLXND1-202ENST00000501038 KCNQ3O43525 872 aa23.36■■□□□ 1.33
PLXND1-202ENST00000501038 CCT4P50991 539 aaKnown RBP23.36■■□□□ 1.33
PLXND1-202ENST00000501038 GCC1Q96CN9 775 aa23.36■■□□□ 1.33
PLXND1-202ENST00000501038 NUCB1Q02818 461 aa23.34■■□□□ 1.33
PLXND1-202ENST00000501038 SIRT2Q8IXJ6 389 aa23.34■■□□□ 1.33
PLXND1-202ENST00000501038 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
PLXND1-202ENST00000501038 KDM6AO15550 1401 aaPredicted RBP23.34■■□□□ 1.33
PLXND1-202ENST00000501038 F6X3S4 739 aa23.33■■□□□ 1.33
PLXND1-202ENST00000501038 PHKG2P15735 406 aa23.33■■□□□ 1.33
PLXND1-202ENST00000501038 NPM2Q86SE8 214 aaKnown RBP23.33■■□□□ 1.33
PLXND1-202ENST00000501038 FKBP5Q13451 457 aaPredicted RBP23.33■■□□□ 1.32
PLXND1-202ENST00000501038 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
PLXND1-202ENST00000501038 WDR17Q8IZU2 1322 aa23.32■■□□□ 1.32
PLXND1-202ENST00000501038 ATP10DQ9P241 1426 aa23.32■■□□□ 1.32
PLXND1-202ENST00000501038 SLC4A10Q6U841 1118 aa23.32■■□□□ 1.32
PLXND1-202ENST00000501038 IFNL2Q8IZJ0 200 aa23.32■■□□□ 1.32
PLXND1-202ENST00000501038 ANKRD44Q8N8A2 993 aa23.31■■□□□ 1.32
PLXND1-202ENST00000501038 HEG1Q9ULI3 1381 aa23.3■■□□□ 1.32
PLXND1-202ENST00000501038 RPAP2Q8IXW5 612 aaPredicted RBP23.3■■□□□ 1.32
PLXND1-202ENST00000501038 IPO9Q96P70 1041 aaKnown RBP23.3■■□□□ 1.32
PLXND1-202ENST00000501038 MEIS3Q99687 375 aa23.3■■□□□ 1.32
PLXND1-202ENST00000501038 ROBO1Q9Y6N7 1651 aa23.3■■□□□ 1.32
PLXND1-202ENST00000501038 MRC1P22897 1456 aa23.3■■□□□ 1.32
PLXND1-202ENST00000501038 EIF2S2P20042 333 aaKnown RBP23.3■■□□□ 1.32
PLXND1-202ENST00000501038 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
PLXND1-202ENST00000501038 SLC52A2Q9HAB3 445 aa23.28■■□□□ 1.32
PLXND1-202ENST00000501038 AHDC1Q5TGY3 1603 aaPredicted RBP23.28■■□□□ 1.32
PLXND1-202ENST00000501038 CEP85Q6P2H3 762 aa23.27■■□□□ 1.32
PLXND1-202ENST00000501038 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.32
PLXND1-202ENST00000501038 LTBP4Q8N2S1 1624 aa23.27■■□□□ 1.32
PLXND1-202ENST00000501038 GIGYF1O75420 1035 aaPredicted RBP23.26■■□□□ 1.31
PLXND1-202ENST00000501038 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
PLXND1-202ENST00000501038 CHPF2Q9P2E5 772 aa23.26■■□□□ 1.31
PLXND1-202ENST00000501038 CYP27B1O15528 508 aa23.26■■□□□ 1.31
PLXND1-202ENST00000501038 ANKRD45Q5TZF3 282 aa23.26■■□□□ 1.31
PLXND1-202ENST00000501038 DCAF5Q96JK2 942 aa23.26■■□□□ 1.31
PLXND1-202ENST00000501038 LNPKQ9C0E8 428 aa23.26■■□□□ 1.31
PLXND1-202ENST00000501038 PHAXQ9H814 394 aaKnown RBP23.26■■□□□ 1.31
PLXND1-202ENST00000501038 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
PLXND1-202ENST00000501038 C5P01031 1676 aa23.24■■□□□ 1.31
PLXND1-202ENST00000501038 COL22A1Q8NFW1 1626 aaPredicted RBP23.23■■□□□ 1.31
PLXND1-202ENST00000501038 CARD10Q9BWT7 1032 aa23.23■■□□□ 1.31
PLXND1-202ENST00000501038 GNAI3P08754 354 aa23.22■■□□□ 1.31
PLXND1-202ENST00000501038 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
PLXND1-202ENST00000501038 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
PLXND1-202ENST00000501038 GNAI2P04899 355 aa23.22■■□□□ 1.31
PLXND1-202ENST00000501038 COL14A1Q05707 1796 aaKnown RBP23.21■■□□□ 1.31
PLXND1-202ENST00000501038 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
PLXND1-202ENST00000501038 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
PLXND1-202ENST00000501038 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
PLXND1-202ENST00000501038 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
PLXND1-202ENST00000501038 ZCRB1Q8TBF4 217 aaKnown RBP23.2■■□□□ 1.3
PLXND1-202ENST00000501038 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.3
PLXND1-202ENST00000501038 HMMRO75330 724 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 EVA1CP58658 441 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 DDRGK1Q96HY6 314 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 IL2RBP14784 551 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 SLC39A6Q13433 755 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
PLXND1-202ENST00000501038 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
PLXND1-202ENST00000501038 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
PLXND1-202ENST00000501038 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
PLXND1-202ENST00000501038 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
PLXND1-202ENST00000501038 ANXA1P04083 346 aa23.17■■□□□ 1.3
PLXND1-202ENST00000501038 SRCIN1Q9C0H9 1055 aa23.17■■□□□ 1.3
PLXND1-202ENST00000501038 SEC24BO95487 1268 aa23.16■■□□□ 1.3
PLXND1-202ENST00000501038 CABP4P57796 275 aa23.16■■□□□ 1.3
PLXND1-202ENST00000501038 HYPKQ9NX55 129 aa23.16■■□□□ 1.3
PLXND1-202ENST00000501038 ADCY9O60503 1353 aa23.16■■□□□ 1.3
PLXND1-202ENST00000501038 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
PLXND1-202ENST00000501038 LAMB4A4D0S4 1761 aa23.15■■□□□ 1.3
PLXND1-202ENST00000501038 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
PLXND1-202ENST00000501038 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
PLXND1-202ENST00000501038 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
PLXND1-202ENST00000501038 DDX21Q9NR30 783 aaKnown RBP eCLIP23.15■■□□□ 1.3
PLXND1-202ENST00000501038 PROSER3Q2NL68 480 aa23.14■■□□□ 1.29
PLXND1-202ENST00000501038 BEND3Q5T5X7 828 aa23.14■■□□□ 1.29
PLXND1-202ENST00000501038 TTC5Q8N0Z6 440 aa23.14■■□□□ 1.29
PLXND1-202ENST00000501038 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
PLXND1-202ENST00000501038 ATP8B2P98198 1209 aa23.13■■□□□ 1.29
PLXND1-202ENST00000501038 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
PLXND1-202ENST00000501038 ZNF496Q96IT1 587 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms