RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
HDLBP-247ENST00000498595 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
HDLBP-247ENST00000498595 RBM42Q9BTD8 480 aaKnown RBP19.65■□□□□ 0.74
HDLBP-247ENST00000498595 COL24A1Q17RW2 1714 aa19.65■□□□□ 0.74
HDLBP-247ENST00000498595 IL13P35225 146 aa19.63■□□□□ 0.73
HDLBP-247ENST00000498595 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
HDLBP-247ENST00000498595 CD2APQ9Y5K6 639 aa19.63■□□□□ 0.73
HDLBP-247ENST00000498595 TAF1LQ8IZX4 1826 aa19.62■□□□□ 0.73
HDLBP-247ENST00000498595 ITPK1Q13572 414 aa19.62■□□□□ 0.73
HDLBP-247ENST00000498595 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
HDLBP-247ENST00000498595 KDRP35968 1356 aa19.61■□□□□ 0.73
HDLBP-247ENST00000498595 GRIN3BO60391 1043 aa19.61■□□□□ 0.73
HDLBP-247ENST00000498595 RTCBQ9Y3I0 505 aaKnown RBP19.6■□□□□ 0.73
HDLBP-247ENST00000498595 ZNF784Q8NCA9 323 aaPredicted RBP19.59■□□□□ 0.73
HDLBP-247ENST00000498595 KDM6AO15550 1401 aaPredicted RBP19.59■□□□□ 0.73
HDLBP-247ENST00000498595 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.72
HDLBP-247ENST00000498595 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
HDLBP-247ENST00000498595 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
HDLBP-247ENST00000498595 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.72
HDLBP-247ENST00000498595 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
HDLBP-247ENST00000498595 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
HDLBP-247ENST00000498595 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
HDLBP-247ENST00000498595 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
HDLBP-247ENST00000498595 NFATC2IPQ8NCF5 419 aa19.57■□□□□ 0.72
HDLBP-247ENST00000498595 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
HDLBP-247ENST00000498595 ADRA2BP18089 450 aa19.56■□□□□ 0.72
HDLBP-247ENST00000498595 UBR3Q6ZT12 1888 aa19.56■□□□□ 0.72
HDLBP-247ENST00000498595 HMOX1P09601 288 aa19.55■□□□□ 0.72
HDLBP-247ENST00000498595 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
HDLBP-247ENST00000498595 RFC4P35249 363 aa19.54■□□□□ 0.72
HDLBP-247ENST00000498595 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
HDLBP-247ENST00000498595 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.723e-7■■□□□ 12.6
HDLBP-247ENST00000498595 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
HDLBP-247ENST00000498595 SLC4A9Q96Q91 983 aa19.53■□□□□ 0.72
HDLBP-247ENST00000498595 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
HDLBP-247ENST00000498595 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.71
HDLBP-247ENST00000498595 CHD4Q14839 1912 aa19.51■□□□□ 0.71
HDLBP-247ENST00000498595 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
HDLBP-247ENST00000498595 MMP10P09238 476 aa19.51■□□□□ 0.71
HDLBP-247ENST00000498595 ARHGEF1Q92888 912 aaKnown RBP19.5■□□□□ 0.71
HDLBP-247ENST00000498595 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
HDLBP-247ENST00000498595 SLC52A2Q9HAB3 445 aa19.5■□□□□ 0.71
HDLBP-247ENST00000498595 UTRNP46939 3433 aa19.5■□□□□ 0.71
HDLBP-247ENST00000498595 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
HDLBP-247ENST00000498595 CRKLP46109 303 aaKnown RBP19.48■□□□□ 0.71
HDLBP-247ENST00000498595 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
HDLBP-247ENST00000498595 LGR6Q9HBX8 967 aa19.47■□□□□ 0.71
HDLBP-247ENST00000498595 CCDC87Q9NVE4 849 aa19.47■□□□□ 0.71
HDLBP-247ENST00000498595 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
HDLBP-247ENST00000498595 GYS1P13807 737 aa19.45■□□□□ 0.7
HDLBP-247ENST00000498595 GAS2L2Q8NHY3 880 aa19.45■□□□□ 0.7
HDLBP-247ENST00000498595 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
HDLBP-247ENST00000498595 GIGYF1O75420 1035 aaPredicted RBP19.44■□□□□ 0.7
HDLBP-247ENST00000498595 TGFB2P61812 414 aa19.44■□□□□ 0.7
HDLBP-247ENST00000498595 TTC5Q8N0Z6 440 aa19.44■□□□□ 0.7
HDLBP-247ENST00000498595 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
HDLBP-247ENST00000498595 NUDCQ9Y266 331 aa19.44■□□□□ 0.7
HDLBP-247ENST00000498595 SCN11AQ9UI33 1791 aa19.44■□□□□ 0.7
HDLBP-247ENST00000498595 TEFQ10587 303 aa19.43■□□□□ 0.7
HDLBP-247ENST00000498595 DNAJC10Q8IXB1 793 aa19.43■□□□□ 0.7
HDLBP-247ENST00000498595 MRC1P22897 1456 aa19.42■□□□□ 0.7
HDLBP-247ENST00000498595 ZPR1O75312 459 aa19.42■□□□□ 0.7
HDLBP-247ENST00000498595 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
HDLBP-247ENST00000498595 CICQ96RK0 1608 aaPredicted RBP19.42■□□□□ 0.7
HDLBP-247ENST00000498595 GNAT3A8MTJ3 354 aa19.41■□□□□ 0.7
HDLBP-247ENST00000498595 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
HDLBP-247ENST00000498595 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
HDLBP-247ENST00000498595 C1QTNF8P60827 252 aa19.4■□□□□ 0.7
HDLBP-247ENST00000498595 INTS5Q6P9B9 1019 aaKnown RBP19.4■□□□□ 0.7
HDLBP-247ENST00000498595 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
HDLBP-247ENST00000498595 SRP68Q9UHB9 627 aaKnown RBP19.4■□□□□ 0.7
HDLBP-247ENST00000498595 GOLGB1Q14789 3259 aaKnown RBP19.4■□□□□ 0.7
HDLBP-247ENST00000498595 STARD3NLO95772 234 aa19.39■□□□□ 0.69
HDLBP-247ENST00000498595 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
HDLBP-247ENST00000498595 CYP19A1P11511 503 aaPredicted RBP19.38■□□□□ 0.69
HDLBP-247ENST00000498595 TJP1Q07157 1748 aa19.38■□□□□ 0.69
HDLBP-247ENST00000498595 BCS1LQ9Y276 419 aa19.38■□□□□ 0.69
HDLBP-247ENST00000498595 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
HDLBP-247ENST00000498595 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
HDLBP-247ENST00000498595 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
HDLBP-247ENST00000498595 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
HDLBP-247ENST00000498595 A0A0G2JLW4 131 aa19.37■□□□□ 0.69
HDLBP-247ENST00000498595 FKBP8Q14318 412 aa19.37■□□□□ 0.69
HDLBP-247ENST00000498595 U2AF1L5P0DN76 240 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-247ENST00000498595 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
HDLBP-247ENST00000498595 U2AF1Q01081 240 aaKnown RBP eCLIP19.36■□□□□ 0.69
HDLBP-247ENST00000498595 GPBP1L1Q9HC44 474 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-247ENST00000498595 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
HDLBP-247ENST00000498595 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
HDLBP-247ENST00000498595 NPM2Q86SE8 214 aaKnown RBP19.35■□□□□ 0.69
HDLBP-247ENST00000498595 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
HDLBP-247ENST00000498595 KCPQ6ZWJ8 1503 aa19.35■□□□□ 0.69
HDLBP-247ENST00000498595 COL15A1P39059 1388 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 ADAMTS7Q9UKP4 1686 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 MYH14Q7Z406 1995 aaKnown RBP19.34■□□□□ 0.69
HDLBP-247ENST00000498595 SENP3-EIF4A1A0A087X0R7 540 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 FCHSD2O94868 740 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 DPEP1P16444 411 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 ZNF790Q6PG37 636 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms