RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 KDM6AO15550 1401 aaPredicted RBP35.41■■■■□ 3.26
CUL4A-211ENST00000498562 ATP6V1AP38606 617 aa35.41■■■■□ 3.26
CUL4A-211ENST00000498562 ERVV-2B6SEH9 535 aa35.4■■■■□ 3.26
CUL4A-211ENST00000498562 YBX3P16989 372 aaKnown RBP eCLIP35.4■■■■□ 3.263e-7■□□□□ 8.4
CUL4A-211ENST00000498562 PLEKHO1Q53GL0 409 aaPredicted RBP35.4■■■■□ 3.26
CUL4A-211ENST00000498562 DCAF5Q96JK2 942 aa35.4■■■■□ 3.26
CUL4A-211ENST00000498562 HSP90AB1P08238 724 aaKnown RBP35.39■■■■□ 3.26
CUL4A-211ENST00000498562 AEBP1Q8IUX7 1158 aa35.39■■■■□ 3.26
CUL4A-211ENST00000498562 CD2APQ9Y5K6 639 aa35.39■■■■□ 3.26
CUL4A-211ENST00000498562 ZNF530Q6P9A1 599 aaPredicted RBP35.38■■■■□ 3.25
CUL4A-211ENST00000498562 COL5A3P25940 1745 aaPredicted RBP35.37■■■■□ 3.25
CUL4A-211ENST00000498562 KIF7Q2M1P5 1343 aa35.37■■■■□ 3.25
CUL4A-211ENST00000498562 GNPATO15228 680 aa35.37■■■■□ 3.25
CUL4A-211ENST00000498562 AMOTQ4VCS5 1084 aa35.37■■■■□ 3.25
CUL4A-211ENST00000498562 AMER1Q5JTC6 1135 aaPredicted RBP35.36■■■■□ 3.25
CUL4A-211ENST00000498562 SLC4A9Q96Q91 983 aa35.34■■■■□ 3.25
CUL4A-211ENST00000498562 GRIN3BO60391 1043 aa35.32■■■■□ 3.24
CUL4A-211ENST00000498562 IL13P35225 146 aa35.32■■■■□ 3.24
CUL4A-211ENST00000498562 SULT6B1Q6IMI4 303 aa35.31■■■■□ 3.24
CUL4A-211ENST00000498562 CABP4P57796 275 aa35.29■■■■□ 3.24
CUL4A-211ENST00000498562 RBM42Q9BTD8 480 aaKnown RBP35.29■■■■□ 3.24
CUL4A-211ENST00000498562 SCN11AQ9UI33 1791 aa35.28■■■■□ 3.24
CUL4A-211ENST00000498562 C1orf141Q5JVX7 400 aa35.28■■■■□ 3.24
CUL4A-211ENST00000498562 MTHFSP49914 203 aa35.27■■■■□ 3.24
CUL4A-211ENST00000498562 RTCBQ9Y3I0 505 aaKnown RBP35.24■■■■□ 3.23
CUL4A-211ENST00000498562 CNTNAP4Q9C0A0 1308 aa35.24■■■■□ 3.23
CUL4A-211ENST00000498562 CICQ96RK0 1608 aaPredicted RBP35.24■■■■□ 3.23
CUL4A-211ENST00000498562 MYH14Q7Z406 1995 aaKnown RBP35.24■■■■□ 3.23
CUL4A-211ENST00000498562 RC3H1Q5TC82 1133 aaKnown RBP35.23■■■■□ 3.23
CUL4A-211ENST00000498562 C4AP0C0L4 1744 aa35.23■■■■□ 3.23
CUL4A-211ENST00000498562 PER1O15534 1290 aaPredicted RBP35.22■■■■□ 3.23
CUL4A-211ENST00000498562 TJP1Q07157 1748 aa35.22■■■■□ 3.23
CUL4A-211ENST00000498562 KIF13BQ9NQT8 1826 aa35.21■■■■□ 3.23
CUL4A-211ENST00000498562 TRAPPC3LQ5T215 181 aa35.2■■■■□ 3.23
CUL4A-211ENST00000498562 VIRMAQ69YN4 1812 aaKnown RBP35.19■■■■□ 3.22
CUL4A-211ENST00000498562 NFATC2IPQ8NCF5 419 aa35.19■■■■□ 3.22
CUL4A-211ENST00000498562 KIAA1551Q9HCM1 1747 aa35.18■■■■□ 3.22
CUL4A-211ENST00000498562 MMP10P09238 476 aa35.18■■■■□ 3.22
CUL4A-211ENST00000498562 ADRA2BP18089 450 aa35.18■■■■□ 3.22
CUL4A-211ENST00000498562 PTCD1O75127 700 aaKnown RBP35.16■■■■□ 3.22
CUL4A-211ENST00000498562 RPS6KA4O75676 772 aa35.16■■■■□ 3.22
CUL4A-211ENST00000498562 C1QTNF8P60827 252 aa35.16■■■■□ 3.22
CUL4A-211ENST00000498562 AKAP4Q5JQC9 854 aa35.16■■■■□ 3.22
CUL4A-211ENST00000498562 ARHGEF1Q92888 912 aaKnown RBP35.16■■■■□ 3.22
CUL4A-211ENST00000498562 MRC1P22897 1456 aa35.15■■■■□ 3.22
CUL4A-211ENST00000498562 CC2D1BQ5T0F9 858 aaKnown RBP35.14■■■■□ 3.22
CUL4A-211ENST00000498562 WWC3Q9ULE0 1092 aa35.13■■■■□ 3.21
CUL4A-211ENST00000498562 ADAMTS7Q9UKP4 1686 aa35.12■■■■□ 3.21
CUL4A-211ENST00000498562 GIGYF1O75420 1035 aaPredicted RBP35.12■■■■□ 3.21
CUL4A-211ENST00000498562 HMOX1P09601 288 aa35.12■■■■□ 3.21
CUL4A-211ENST00000498562 NLGN1Q8N2Q7 840 aa35.12■■■■□ 3.21
CUL4A-211ENST00000498562 PXDNLA1KZ92 1463 aa35.11■■■■□ 3.21
CUL4A-211ENST00000498562 GYS1P13807 737 aa35.11■■■■□ 3.21
CUL4A-211ENST00000498562 C10orf71Q711Q0 1435 aa35.11■■■■□ 3.21
CUL4A-211ENST00000498562 ATP10DQ9P241 1426 aa35.11■■■■□ 3.21
CUL4A-211ENST00000498562 N4BP2Q86UW6 1770 aaPredicted RBP35.1■■■■□ 3.21
CUL4A-211ENST00000498562 CRKLP46109 303 aaKnown RBP35.1■■■■□ 3.21
CUL4A-211ENST00000498562 RFC4P35249 363 aa35.09■■■■□ 3.21
CUL4A-211ENST00000498562 SLC52A2Q9HAB3 445 aa35.09■■■■□ 3.21
CUL4A-211ENST00000498562 ADCY9O60503 1353 aa35.09■■■■□ 3.21
CUL4A-211ENST00000498562 NPC1L1Q9UHC9 1359 aa35.09■■■■□ 3.21
CUL4A-211ENST00000498562 COL3A1P02461 1466 aaPredicted RBP35.09■■■■□ 3.21
CUL4A-211ENST00000498562 DIAPH1O60610 1272 aaKnown RBP35.08■■■■□ 3.21
CUL4A-211ENST00000498562 LGR6Q9HBX8 967 aa35.08■■■■□ 3.21
CUL4A-211ENST00000498562 RNMTO43148 476 aaKnown RBP35.05■■■■□ 3.2
CUL4A-211ENST00000498562 KCPQ6ZWJ8 1503 aa35.03■■■■□ 3.2
CUL4A-211ENST00000498562 MTHFSDQ2M296 383 aaKnown RBP35.03■■■■□ 3.2
CUL4A-211ENST00000498562 SENP3-EIF4A1A0A087X0R7 540 aa35.02■■■■□ 3.2
CUL4A-211ENST00000498562 TGFB2P61812 414 aa35.02■■■■□ 3.2
CUL4A-211ENST00000498562 BRCA1P38398 1863 aaKnown RBP35.01■■■■□ 3.2
CUL4A-211ENST00000498562 CCDC87Q9NVE4 849 aa35.01■■■■□ 3.2
CUL4A-211ENST00000498562 USP42Q9H9J4 1324 aaKnown RBP35.01■■■■□ 3.19
CUL4A-211ENST00000498562 INTS5Q6P9B9 1019 aaKnown RBP35■■■■□ 3.19
CUL4A-211ENST00000498562 SRP68Q9UHB9 627 aaKnown RBP35■■■■□ 3.19
CUL4A-211ENST00000498562 PARP3Q9Y6F1 533 aa35■■■■□ 3.19
CUL4A-211ENST00000498562 DNAJC10Q8IXB1 793 aa34.99■■■■□ 3.19
CUL4A-211ENST00000498562 UBR2Q8IWV8 1755 aa34.99■■■■□ 3.19
CUL4A-211ENST00000498562 SLC39A6Q13433 755 aa34.98■■■■□ 3.19
CUL4A-211ENST00000498562 CNGB1Q14028 1251 aaPredicted RBP34.96■■■■□ 3.19
CUL4A-211ENST00000498562 A0A0G2JLW4 131 aa34.95■■■■□ 3.19
CUL4A-211ENST00000498562 FKBP8Q14318 412 aa34.95■■■■□ 3.19
CUL4A-211ENST00000498562 SOS1Q07889 1333 aaPredicted RBP34.93■■■■□ 3.18
CUL4A-211ENST00000498562 GPBP1L1Q9HC44 474 aaPredicted RBP34.93■■■■□ 3.18
CUL4A-211ENST00000498562 CYP19A1P11511 503 aaPredicted RBP34.92■■■■□ 3.18
CUL4A-211ENST00000498562 DPEP1P16444 411 aa34.92■■■■□ 3.18
CUL4A-211ENST00000498562 BCS1LQ9Y276 419 aa34.92■■■■□ 3.18
CUL4A-211ENST00000498562 DDR1Q08345 913 aa34.91■■■■□ 3.18
CUL4A-211ENST00000498562 SIPA1L3O60292 1781 aaPredicted RBP34.9■■■■□ 3.18
CUL4A-211ENST00000498562 U2SURPO15042 1029 aaKnown RBP34.9■■■■□ 3.18
CUL4A-211ENST00000498562 ZNF526Q8TF50 670 aaPredicted RBP34.89■■■■□ 3.18
CUL4A-211ENST00000498562 ARFGEF1Q9Y6D6 1849 aa34.89■■■■□ 3.18
CUL4A-211ENST00000498562 KCNA3P22001 575 aa34.87■■■■□ 3.17
CUL4A-211ENST00000498562 VSIG10Q8N0Z9 540 aa34.87■■■■□ 3.17
CUL4A-211ENST00000498562 ZBTB1Q9Y2K1 713 aa34.87■■■■□ 3.17
CUL4A-211ENST00000498562 COL15A1P39059 1388 aa34.87■■■■□ 3.17
CUL4A-211ENST00000498562 USPL1Q5W0Q7 1092 aa34.86■■■■□ 3.17
CUL4A-211ENST00000498562 POLRMTO00411 1230 aaKnown RBP34.85■■■■□ 3.17
CUL4A-211ENST00000498562 TM4SF1P30408 202 aa34.85■■■■□ 3.17
CUL4A-211ENST00000498562 ZPR1O75312 459 aa34.84■■■■□ 3.17
CUL4A-211ENST00000498562 GAS2L2Q8NHY3 880 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms