RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
CNOT4-211ENST00000498534 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
CNOT4-211ENST00000498534 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
CNOT4-211ENST00000498534 SSFA2P28290 1259 aa16.51■□□□□ 0.23
CNOT4-211ENST00000498534 PANK3Q9H999 370 aa16.51■□□□□ 0.23
CNOT4-211ENST00000498534 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
CNOT4-211ENST00000498534 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
CNOT4-211ENST00000498534 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
CNOT4-211ENST00000498534 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
CNOT4-211ENST00000498534 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
CNOT4-211ENST00000498534 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
CNOT4-211ENST00000498534 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
CNOT4-211ENST00000498534 ERVV-2B6SEH9 535 aa16.49■□□□□ 0.23
CNOT4-211ENST00000498534 HSPA5P11021 654 aaKnown RBP16.49■□□□□ 0.23
CNOT4-211ENST00000498534 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CNOT4-211ENST00000498534 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
CNOT4-211ENST00000498534 ANKRD26Q9UPS8 1709 aa16.48■□□□□ 0.23
CNOT4-211ENST00000498534 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
CNOT4-211ENST00000498534 GNPATO15228 680 aa16.48■□□□□ 0.23
CNOT4-211ENST00000498534 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
CNOT4-211ENST00000498534 SMIM5Q71RC9 77 aa16.48■□□□□ 0.23
CNOT4-211ENST00000498534 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
CNOT4-211ENST00000498534 ITPK1Q13572 414 aa16.47■□□□□ 0.23
CNOT4-211ENST00000498534 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
CNOT4-211ENST00000498534 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
CNOT4-211ENST00000498534 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
CNOT4-211ENST00000498534 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
CNOT4-211ENST00000498534 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
CNOT4-211ENST00000498534 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
CNOT4-211ENST00000498534 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
CNOT4-211ENST00000498534 CABP4P57796 275 aa16.45■□□□□ 0.22
CNOT4-211ENST00000498534 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
CNOT4-211ENST00000498534 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
CNOT4-211ENST00000498534 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
CNOT4-211ENST00000498534 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
CNOT4-211ENST00000498534 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
CNOT4-211ENST00000498534 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
CNOT4-211ENST00000498534 MTHFSP49914 203 aa16.43■□□□□ 0.22
CNOT4-211ENST00000498534 C1orf141Q5JVX7 400 aa16.43■□□□□ 0.22
CNOT4-211ENST00000498534 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
CNOT4-211ENST00000498534 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
CNOT4-211ENST00000498534 MMP10P09238 476 aa16.41■□□□□ 0.22
CNOT4-211ENST00000498534 GPBP1L1Q9HC44 474 aaPredicted RBP16.41■□□□□ 0.22
CNOT4-211ENST00000498534 RFC4P35249 363 aa16.4■□□□□ 0.22
CNOT4-211ENST00000498534 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
CNOT4-211ENST00000498534 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
CNOT4-211ENST00000498534 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
CNOT4-211ENST00000498534 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
CNOT4-211ENST00000498534 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
CNOT4-211ENST00000498534 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
CNOT4-211ENST00000498534 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
CNOT4-211ENST00000498534 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
CNOT4-211ENST00000498534 TGFB2P61812 414 aa16.38■□□□□ 0.21
CNOT4-211ENST00000498534 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
CNOT4-211ENST00000498534 ZBTB22O15209 634 aa16.37■□□□□ 0.21
CNOT4-211ENST00000498534 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
CNOT4-211ENST00000498534 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
CNOT4-211ENST00000498534 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
CNOT4-211ENST00000498534 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
CNOT4-211ENST00000498534 KDRP35968 1356 aa16.36■□□□□ 0.21
CNOT4-211ENST00000498534 IL13P35225 146 aa16.35■□□□□ 0.21
CNOT4-211ENST00000498534 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
CNOT4-211ENST00000498534 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
CNOT4-211ENST00000498534 GYS1P13807 737 aa16.34■□□□□ 0.21
CNOT4-211ENST00000498534 ZNF831Q5JPB2 1677 aa16.34■□□□□ 0.21
CNOT4-211ENST00000498534 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
CNOT4-211ENST00000498534 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
CNOT4-211ENST00000498534 DSG3P32926 999 aa16.32■□□□□ 0.2
CNOT4-211ENST00000498534 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
CNOT4-211ENST00000498534 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
CNOT4-211ENST00000498534 ADCY9O60503 1353 aa16.31■□□□□ 0.2
CNOT4-211ENST00000498534 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
CNOT4-211ENST00000498534 FCHSD2O94868 740 aa16.3■□□□□ 0.2
CNOT4-211ENST00000498534 DPEP1P16444 411 aa16.3■□□□□ 0.2
CNOT4-211ENST00000498534 ZPR1O75312 459 aa16.29■□□□□ 0.2
CNOT4-211ENST00000498534 HMOX1P09601 288 aa16.29■□□□□ 0.2
CNOT4-211ENST00000498534 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
CNOT4-211ENST00000498534 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
CNOT4-211ENST00000498534 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
CNOT4-211ENST00000498534 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
CNOT4-211ENST00000498534 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
CNOT4-211ENST00000498534 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
CNOT4-211ENST00000498534 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
CNOT4-211ENST00000498534 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
CNOT4-211ENST00000498534 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
CNOT4-211ENST00000498534 PIM2Q9P1W9 311 aa16.28■□□□□ 0.2
CNOT4-211ENST00000498534 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
CNOT4-211ENST00000498534 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
CNOT4-211ENST00000498534 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
CNOT4-211ENST00000498534 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
CNOT4-211ENST00000498534 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
CNOT4-211ENST00000498534 FKBP8Q14318 412 aa16.27■□□□□ 0.2
CNOT4-211ENST00000498534 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.19
CNOT4-211ENST00000498534 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
CNOT4-211ENST00000498534 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
CNOT4-211ENST00000498534 HSPA6P17066 643 aa16.26■□□□□ 0.19
CNOT4-211ENST00000498534 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
CNOT4-211ENST00000498534 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
CNOT4-211ENST00000498534 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
CNOT4-211ENST00000498534 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms