RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 BTG4Q9NY30 223 aa22.64■■□□□ 1.21
CHRNA4-206ENST00000498043 PCDHB15Q9Y5E8 787 aa22.64■■□□□ 1.21
CHRNA4-206ENST00000498043 RGS12O14924 1447 aa22.63■■□□□ 1.21
CHRNA4-206ENST00000498043 KCNQ3O43525 872 aa22.63■■□□□ 1.21
CHRNA4-206ENST00000498043 SLC4A2P04920 1241 aa22.63■■□□□ 1.21
CHRNA4-206ENST00000498043 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
CHRNA4-206ENST00000498043 CARD10Q9BWT7 1032 aa22.63■■□□□ 1.21
CHRNA4-206ENST00000498043 CYP27B1O15528 508 aa22.62■■□□□ 1.21
CHRNA4-206ENST00000498043 IGHDP01880 384 aa22.62■■□□□ 1.21
CHRNA4-206ENST00000498043 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
CHRNA4-206ENST00000498043 SKAP1Q86WV1 359 aa22.62■■□□□ 1.21
CHRNA4-206ENST00000498043 PLCH1Q4KWH8 1693 aa22.61■■□□□ 1.21
CHRNA4-206ENST00000498043 SHANK3Q9BYB0 1731 aa22.61■■□□□ 1.21
CHRNA4-206ENST00000498043 STK31Q9BXU1 1019 aa22.61■■□□□ 1.21
CHRNA4-206ENST00000498043 SOS1Q07889 1333 aaPredicted RBP22.61■■□□□ 1.21
CHRNA4-206ENST00000498043 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
CHRNA4-206ENST00000498043 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
CHRNA4-206ENST00000498043 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
CHRNA4-206ENST00000498043 PTPRCP08575 1304 aa22.6■■□□□ 1.21
CHRNA4-206ENST00000498043 MRC1P22897 1456 aa22.59■■□□□ 1.21
CHRNA4-206ENST00000498043 IL2RBP14784 551 aa22.59■■□□□ 1.21
CHRNA4-206ENST00000498043 G2E3Q7L622 706 aa22.59■■□□□ 1.21
CHRNA4-206ENST00000498043 HDGFL1Q5TGJ6 251 aa22.58■■□□□ 1.21
CHRNA4-206ENST00000498043 ZBTB40Q9NUA8 1239 aa22.58■■□□□ 1.21
CHRNA4-206ENST00000498043 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
CHRNA4-206ENST00000498043 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
CHRNA4-206ENST00000498043 DCAF5Q96JK2 942 aa22.58■■□□□ 1.2
CHRNA4-206ENST00000498043 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.2
CHRNA4-206ENST00000498043 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CHRNA4-206ENST00000498043 ZCRB1Q8TBF4 217 aaKnown RBP22.57■■□□□ 1.2
CHRNA4-206ENST00000498043 CACNA1FO60840 1977 aa22.57■■□□□ 1.2
CHRNA4-206ENST00000498043 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
CHRNA4-206ENST00000498043 HSP90AB1P08238 724 aaKnown RBP22.55■■□□□ 1.2
CHRNA4-206ENST00000498043 HOXB7P09629 217 aa22.54■■□□□ 1.2
CHRNA4-206ENST00000498043 EIF2S2P20042 333 aaKnown RBP22.54■■□□□ 1.2
CHRNA4-206ENST00000498043 NFATC2IPQ8NCF5 419 aa22.54■■□□□ 1.2
CHRNA4-206ENST00000498043 ZBTB7BO15156 539 aaPredicted RBP22.54■■□□□ 1.2
CHRNA4-206ENST00000498043 NRAPQ86VF7 1730 aa22.54■■□□□ 1.2
CHRNA4-206ENST00000498043 C5P01031 1676 aa22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 FLIIQ13045 1269 aa22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
CHRNA4-206ENST00000498043 WNK3Q9BYP7 1800 aa22.52■■□□□ 1.2
CHRNA4-206ENST00000498043 INTS3Q68E01 1043 aaKnown RBP22.52■■□□□ 1.2
CHRNA4-206ENST00000498043 RWDD1Q9H446 243 aaPredicted RBP22.52■■□□□ 1.2
CHRNA4-206ENST00000498043 F6X3S4 739 aa22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 C1orf115Q9H7X2 142 aa22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 FKBP5Q13451 457 aaPredicted RBP22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 CHMP4BQ9H444 224 aaKnown RBP22.51■■□□□ 1.19
CHRNA4-206ENST00000498043 GIGYF1O75420 1035 aaPredicted RBP22.5■■□□□ 1.19
CHRNA4-206ENST00000498043 CHPF2Q9P2E5 772 aa22.5■■□□□ 1.19
CHRNA4-206ENST00000498043 PRAMEF22A3QJZ6 481 aa22.5■■□□□ 1.19
CHRNA4-206ENST00000498043 CABP4P57796 275 aa22.5■■□□□ 1.19
CHRNA4-206ENST00000498043 SLC4A10Q6U841 1118 aa22.5■■□□□ 1.19
CHRNA4-206ENST00000498043 N4BP2Q86UW6 1770 aaPredicted RBP22.49■■□□□ 1.19
CHRNA4-206ENST00000498043 TOGARAM1Q9Y4F4 1720 aa22.49■■□□□ 1.19
CHRNA4-206ENST00000498043 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
CHRNA4-206ENST00000498043 PHAXQ9H814 394 aaKnown RBP22.48■■□□□ 1.19
CHRNA4-206ENST00000498043 RGS3P49796 1198 aa22.47■■□□□ 1.19
CHRNA4-206ENST00000498043 HDAC1Q13547 482 aaPredicted RBP22.47■■□□□ 1.19
CHRNA4-206ENST00000498043 ANXA1P04083 346 aa22.46■■□□□ 1.19
CHRNA4-206ENST00000498043 TTC5Q8N0Z6 440 aa22.46■■□□□ 1.19
CHRNA4-206ENST00000498043 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
CHRNA4-206ENST00000498043 GLI3P10071 1580 aa22.45■■□□□ 1.18
CHRNA4-206ENST00000498043 CHMP4AQ9BY43 222 aa22.45■■□□□ 1.18
CHRNA4-206ENST00000498043 PAPPAQ13219 1627 aa22.45■■□□□ 1.18
CHRNA4-206ENST00000498043 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
CHRNA4-206ENST00000498043 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
CHRNA4-206ENST00000498043 ZNF496Q96IT1 587 aaPredicted RBP22.44■■□□□ 1.18
CHRNA4-206ENST00000498043 RBM19Q9Y4C8 960 aaKnown RBP22.44■■□□□ 1.18
CHRNA4-206ENST00000498043 CCT4P50991 539 aaKnown RBP22.43■■□□□ 1.18
CHRNA4-206ENST00000498043 MEIS3Q99687 375 aa22.43■■□□□ 1.18
CHRNA4-206ENST00000498043 DBF4Q9UBU7 674 aaPredicted RBP22.43■■□□□ 1.18
CHRNA4-206ENST00000498043 UBR2Q8IWV8 1755 aa22.43■■□□□ 1.18
CHRNA4-206ENST00000498043 LAMB4A4D0S4 1761 aa22.42■■□□□ 1.18
CHRNA4-206ENST00000498043 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
CHRNA4-206ENST00000498043 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
CHRNA4-206ENST00000498043 CERKQ8TCT0 537 aa22.42■■□□□ 1.18
CHRNA4-206ENST00000498043 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
CHRNA4-206ENST00000498043 JCADQ9P266 1359 aa22.41■■□□□ 1.18
CHRNA4-206ENST00000498043 SLIT2O94813 1529 aa22.4■■□□□ 1.18
CHRNA4-206ENST00000498043 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
CHRNA4-206ENST00000498043 FMNL2Q96PY5 1086 aa22.4■■□□□ 1.18
CHRNA4-206ENST00000498043 TNS2Q63HR2 1409 aa22.39■■□□□ 1.18
CHRNA4-206ENST00000498043 SPATA31A1Q5TZJ5 1347 aa22.39■■□□□ 1.18
CHRNA4-206ENST00000498043 SIRT2Q8IXJ6 389 aa22.38■■□□□ 1.17
CHRNA4-206ENST00000498043 KCPQ6ZWJ8 1503 aa22.38■■□□□ 1.17
CHRNA4-206ENST00000498043 SNRPA1P09661 255 aaKnown RBP22.37■■□□□ 1.17
CHRNA4-206ENST00000498043 SMC5Q8IY18 1101 aa22.37■■□□□ 1.17
CHRNA4-206ENST00000498043 ITGB4P16144 1822 aa22.37■■□□□ 1.17
CHRNA4-206ENST00000498043 ADCY9O60503 1353 aa22.37■■□□□ 1.17
CHRNA4-206ENST00000498043 PI4KAP2A4QPH2 592 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 PI4KAP1Q8N8J0 262 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 DDX21Q9NR30 783 aaKnown RBP eCLIP22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 TMOD3Q9NYL9 352 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms