RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GOLGA6L1Q8N7Z2 621 aa7.75□□□□□ -1.17
VPS26A-208ENST00000497022 KLRG1Q96E93 195 aa7.75□□□□□ -1.17
VPS26A-208ENST00000497022 TRAK2O60296 914 aa7.74□□□□□ -1.17
VPS26A-208ENST00000497022 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
VPS26A-208ENST00000497022 ARHGEF10LQ9HCE6 1279 aa7.74□□□□□ -1.17
VPS26A-208ENST00000497022 A0A1B0GTH6 734 aa7.73□□□□□ -1.17
VPS26A-208ENST00000497022 THBS1P07996 1170 aa7.73□□□□□ -1.17
VPS26A-208ENST00000497022 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
VPS26A-208ENST00000497022 RRAGCQ9HB90 399 aa7.73□□□□□ -1.17
VPS26A-208ENST00000497022 SLCO4C1Q6ZQN7 724 aa7.72□□□□□ -1.17
VPS26A-208ENST00000497022 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
VPS26A-208ENST00000497022 OSBPL3Q9H4L5 887 aa7.72□□□□□ -1.17
VPS26A-208ENST00000497022 GNRH1P01148 92 aa7.71□□□□□ -1.18
VPS26A-208ENST00000497022 FURINP09958 794 aa7.71□□□□□ -1.18
VPS26A-208ENST00000497022 SCTRP47872 440 aa7.71□□□□□ -1.18
VPS26A-208ENST00000497022 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
VPS26A-208ENST00000497022 ESYT1Q9BSJ8 1104 aa7.71□□□□□ -1.18
VPS26A-208ENST00000497022 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.18
VPS26A-208ENST00000497022 ATXN7L1Q9ULK2 861 aaPredicted RBP7.71□□□□□ -1.18
VPS26A-208ENST00000497022 GNB5O14775 395 aa7.7□□□□□ -1.18
VPS26A-208ENST00000497022 UBAP2LQ14157 1087 aaKnown RBP7.7□□□□□ -1.18
VPS26A-208ENST00000497022 GRIN2CQ14957 1233 aa7.7□□□□□ -1.18
VPS26A-208ENST00000497022 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
VPS26A-208ENST00000497022 GPAMQ9HCL2 828 aa7.7□□□□□ -1.18
VPS26A-208ENST00000497022 PCDHB11Q9Y5F2 797 aa7.7□□□□□ -1.18
VPS26A-208ENST00000497022 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
VPS26A-208ENST00000497022 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
VPS26A-208ENST00000497022 PGBD3Q8N328 593 aa7.69□□□□□ -1.18
VPS26A-208ENST00000497022 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
VPS26A-208ENST00000497022 ZNF330Q9Y3S2 320 aaPredicted RBP7.69□□□□□ -1.18
VPS26A-208ENST00000497022 BMP4P12644 408 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 AMPD1P23109 780 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 CENPCQ03188 943 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 NR1H3Q13133 447 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 EFHC2Q5JST6 749 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
VPS26A-208ENST00000497022 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
VPS26A-208ENST00000497022 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
VPS26A-208ENST00000497022 IL2RAP01589 272 aa7.67□□□□□ -1.18
VPS26A-208ENST00000497022 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
VPS26A-208ENST00000497022 GNASQ5JWF2 1037 aa7.67□□□□□ -1.18
VPS26A-208ENST00000497022 GJD4Q96KN9 370 aaPredicted RBP7.67□□□□□ -1.18
VPS26A-208ENST00000497022 SUV39H2Q9H5I1 410 aa7.67□□□□□ -1.18
VPS26A-208ENST00000497022 HRH3Q9Y5N1 445 aa7.67□□□□□ -1.18
VPS26A-208ENST00000497022 C1QTNF9BB2RNN3 333 aa7.66□□□□□ -1.18
VPS26A-208ENST00000497022 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
VPS26A-208ENST00000497022 NDFIP2Q9NV92 336 aa7.66□□□□□ -1.18
VPS26A-208ENST00000497022 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
VPS26A-208ENST00000497022 ARAFP10398 606 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 EPXP11678 715 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 FGFR3P22607 806 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 DGKGP49619 791 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 CD163Q86VB7 1156 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 XAGE2Q96GT9 111 aa7.65□□□□□ -1.18
VPS26A-208ENST00000497022 FHDC1Q9C0D6 1143 aaPredicted RBP7.65□□□□□ -1.18
VPS26A-208ENST00000497022 C2CD2LO14523 706 aa7.64□□□□□ -1.19
VPS26A-208ENST00000497022 MYCP01106 439 aaPredicted RBP7.64□□□□□ -1.19
VPS26A-208ENST00000497022 PHKA2P46019 1235 aa7.64□□□□□ -1.19
VPS26A-208ENST00000497022 TMEM214Q6NUQ4 689 aaKnown RBP7.64□□□□□ -1.19
VPS26A-208ENST00000497022 BTBD6Q96KE9 485 aa7.64□□□□□ -1.19
VPS26A-208ENST00000497022 CRISPLD1Q9H336 500 aa7.64□□□□□ -1.19
VPS26A-208ENST00000497022 RUBCNLQ9H714 662 aa7.64□□□□□ -1.19
VPS26A-208ENST00000497022 MSX1P28360 303 aa7.63□□□□□ -1.19
VPS26A-208ENST00000497022 C4orf17Q53FE4 359 aa7.63□□□□□ -1.19
VPS26A-208ENST00000497022 ESCO1Q5FWF5 840 aa7.63□□□□□ -1.19
VPS26A-208ENST00000497022 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
VPS26A-208ENST00000497022 ABHD17AQ96GS6 310 aa7.63□□□□□ -1.19
VPS26A-208ENST00000497022 SOCS7O14512 581 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 BNIP3LO60238 219 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 CHRNA4P43681 627 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 RNF135Q8IUD6 432 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 BANK1Q8NDB2 785 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 RHBDD1Q8TEB9 315 aa7.62□□□□□ -1.19
VPS26A-208ENST00000497022 CTBSQ01459 385 aa7.61□□□□□ -1.19
VPS26A-208ENST00000497022 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
VPS26A-208ENST00000497022 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
VPS26A-208ENST00000497022 ITGB7P26010 798 aa7.59□□□□□ -1.19
VPS26A-208ENST00000497022 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
VPS26A-208ENST00000497022 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
VPS26A-208ENST00000497022 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
VPS26A-208ENST00000497022 NEURL1BA8MQ27 555 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 ADH6P28332 368 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 CHSY3Q70JA7 882 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 NLRP8Q86W28 1048 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 SNRKQ9NRH2 765 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 PCDHGC4Q9Y5F7 938 aa7.58□□□□□ -1.2
VPS26A-208ENST00000497022 GPR37L1O60883 481 aa7.57□□□□□ -1.2
VPS26A-208ENST00000497022 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
VPS26A-208ENST00000497022 MTMR14Q8NCE2 650 aa7.57□□□□□ -1.2
VPS26A-208ENST00000497022 SEMA6BQ9H3T3 888 aa7.57□□□□□ -1.2
VPS26A-208ENST00000497022 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
VPS26A-208ENST00000497022 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
VPS26A-208ENST00000497022 ZMYM1Q5SVZ6 1142 aa7.56□□□□□ -1.2
VPS26A-208ENST00000497022 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
VPS26A-208ENST00000497022 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
VPS26A-208ENST00000497022 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
VPS26A-208ENST00000497022 NDUFB9Q9Y6M9 179 aa7.56□□□□□ -1.2
VPS26A-208ENST00000497022 APBB1O00213 710 aa7.55□□□□□ -1.2
VPS26A-208ENST00000497022 SPATA31C1P0DKV0 1188 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms