RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CDCA7Q9BWT1 371 aaPredicted RBP31.24■■■□□ 2.59
PPP1R3F-205ENST00000495799 EXOC6Q8TAG9 804 aa31.24■■■□□ 2.59
PPP1R3F-205ENST00000495799 CHMP4AQ9BY43 222 aa31.24■■■□□ 2.59
PPP1R3F-205ENST00000495799 C20orf194Q5TEA3 1177 aa31.23■■■□□ 2.59
PPP1R3F-205ENST00000495799 HSPA1LP34931 641 aa31.22■■■□□ 2.59
PPP1R3F-205ENST00000495799 MRPL50Q8N5N7 158 aaKnown RBP31.21■■■□□ 2.59
PPP1R3F-205ENST00000495799 SLC52A2Q9HAB3 445 aa31.21■■■□□ 2.59
PPP1R3F-205ENST00000495799 NKX1-1Q15270 411 aaPredicted RBP31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 KRT24Q2M2I5 525 aa31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 SPATA31A1Q5TZJ5 1347 aa31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 HOXB7P09629 217 aa31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 ATF7IPQ6VMQ6 1270 aa31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 NOB1Q9ULX3 412 aaKnown RBP31.19■■■□□ 2.58
PPP1R3F-205ENST00000495799 UNC5CLQ8IV45 518 aa31.18■■■□□ 2.58
PPP1R3F-205ENST00000495799 FTSJ3Q8IY81 847 aaKnown RBP31.18■■■□□ 2.58
PPP1R3F-205ENST00000495799 ARHGAP45Q92619 1136 aa31.18■■■□□ 2.58
PPP1R3F-205ENST00000495799 NGLY1Q96IV0 654 aa31.18■■■□□ 2.58
PPP1R3F-205ENST00000495799 C8orf37Q96NL8 207 aa31.17■■■□□ 2.58
PPP1R3F-205ENST00000495799 EIF4A1P60842 406 aaKnown RBP31.16■■■□□ 2.58
PPP1R3F-205ENST00000495799 DZIP1LQ8IYY4 767 aaKnown RBP31.16■■■□□ 2.58
PPP1R3F-205ENST00000495799 SPATA31A5Q5VU36 1347 aa31.16■■■□□ 2.58
PPP1R3F-205ENST00000495799 SPATA31A7Q8IWB4 1347 aa31.16■■■□□ 2.58
PPP1R3F-205ENST00000495799 LRP6O75581 1613 aa31.15■■■□□ 2.58
PPP1R3F-205ENST00000495799 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.15■■■□□ 2.58
PPP1R3F-205ENST00000495799 ERVV-2B6SEH9 535 aa31.14■■■□□ 2.58
PPP1R3F-205ENST00000495799 CABP4P57796 275 aa31.14■■■□□ 2.58
PPP1R3F-205ENST00000495799 CCDC30Q5VVM6 783 aa31.14■■■□□ 2.58
PPP1R3F-205ENST00000495799 DDX54Q8TDD1 881 aaKnown RBP31.14■■■□□ 2.58
PPP1R3F-205ENST00000495799 AAMPQ13685 434 aa31.14■■■□□ 2.57
PPP1R3F-205ENST00000495799 TNS2Q63HR2 1409 aa31.13■■■□□ 2.57
PPP1R3F-205ENST00000495799 FNBP4Q8N3X1 1017 aaPredicted RBP31.13■■■□□ 2.57
PPP1R3F-205ENST00000495799 CCDC136Q96JN2 1154 aa31.13■■■□□ 2.57
PPP1R3F-205ENST00000495799 STK31Q9BXU1 1019 aa31.13■■■□□ 2.57
PPP1R3F-205ENST00000495799 CCDC9Q9Y3X0 531 aaKnown RBP31.13■■■□□ 2.57
PPP1R3F-205ENST00000495799 CACNA1FO60840 1977 aa31.12■■■□□ 2.57
PPP1R3F-205ENST00000495799 EXOC5O00471 708 aa31.12■■■□□ 2.57
PPP1R3F-205ENST00000495799 TRIM27P14373 513 aa31.12■■■□□ 2.57
PPP1R3F-205ENST00000495799 MEX3CQ5U5Q3 659 aaKnown RBP31.12■■■□□ 2.57
PPP1R3F-205ENST00000495799 PANK1Q8TE04 598 aa31.12■■■□□ 2.57
PPP1R3F-205ENST00000495799 BARGINQ6ZT62 677 aa31.11■■■□□ 2.57
PPP1R3F-205ENST00000495799 NFATC2IPQ8NCF5 419 aa31.11■■■□□ 2.57
PPP1R3F-205ENST00000495799 API5Q9BZZ5 524 aaKnown RBP31.11■■■□□ 2.57
PPP1R3F-205ENST00000495799 VPS72Q15906 364 aa31.1■■■□□ 2.57
PPP1R3F-205ENST00000495799 BCL9LQ86UU0 1499 aa31.09■■■□□ 2.57
PPP1R3F-205ENST00000495799 PTPRCP08575 1304 aa31.09■■■□□ 2.57
PPP1R3F-205ENST00000495799 ZNF790Q6PG37 636 aa31.08■■■□□ 2.57
PPP1R3F-205ENST00000495799 COG6Q9Y2V7 657 aa31.08■■■□□ 2.57
PPP1R3F-205ENST00000495799 TCERG1O14776 1098 aaKnown RBP31.08■■■□□ 2.57
PPP1R3F-205ENST00000495799 B4GALNT3Q6L9W6 998 aa31.08■■■□□ 2.57
PPP1R3F-205ENST00000495799 CLUAP1Q96AJ1 413 aa31.08■■■□□ 2.57
PPP1R3F-205ENST00000495799 KCNQ3O43525 872 aa31.07■■■□□ 2.56
PPP1R3F-205ENST00000495799 TTC5Q8N0Z6 440 aa31.07■■■□□ 2.56
PPP1R3F-205ENST00000495799 MVPQ14764 893 aaKnown RBP31.06■■■□□ 2.56
PPP1R3F-205ENST00000495799 HDGFL1Q5TGJ6 251 aa31.06■■■□□ 2.56
PPP1R3F-205ENST00000495799 PELP1Q8IZL8 1130 aaKnown RBP31.06■■■□□ 2.56
PPP1R3F-205ENST00000495799 HEG1Q9ULI3 1381 aa31.06■■■□□ 2.56
PPP1R3F-205ENST00000495799 RLBP1P12271 317 aa31.05■■■□□ 2.56
PPP1R3F-205ENST00000495799 SLC4A2P04920 1241 aa31.04■■■□□ 2.56
PPP1R3F-205ENST00000495799 DDB1Q16531 1140 aa31.04■■■□□ 2.56
PPP1R3F-205ENST00000495799 USP21Q9UK80 565 aa31.04■■■□□ 2.56
PPP1R3F-205ENST00000495799 TNNQ9UQP3 1299 aa31.03■■■□□ 2.56
PPP1R3F-205ENST00000495799 TOGARAM1Q9Y4F4 1720 aa31.03■■■□□ 2.56
PPP1R3F-205ENST00000495799 DDX19BQ9UMR2 479 aa31.03■■■□□ 2.56
PPP1R3F-205ENST00000495799 CHMP4BQ9H444 224 aaKnown RBP31.02■■■□□ 2.56
PPP1R3F-205ENST00000495799 PAPPAQ13219 1627 aa31.02■■■□□ 2.56
PPP1R3F-205ENST00000495799 GIGYF1O75420 1035 aaPredicted RBP31.01■■■□□ 2.55
PPP1R3F-205ENST00000495799 ABCC4O15439 1325 aa31.01■■■□□ 2.55
PPP1R3F-205ENST00000495799 FMNL2Q96PY5 1086 aa31■■■□□ 2.55
PPP1R3F-205ENST00000495799 SLC39A6Q13433 755 aa30.99■■■□□ 2.55
PPP1R3F-205ENST00000495799 ITPRIPQ8IWB1 547 aa30.99■■■□□ 2.55
PPP1R3F-205ENST00000495799 TMEM57Q8N5G2 664 aa30.98■■■□□ 2.55
PPP1R3F-205ENST00000495799 TMOD3Q9NYL9 352 aa30.98■■■□□ 2.55
PPP1R3F-205ENST00000495799 UBR2Q8IWV8 1755 aa30.97■■■□□ 2.55
PPP1R3F-205ENST00000495799 EIF2S2P20042 333 aaKnown RBP30.97■■■□□ 2.55
PPP1R3F-205ENST00000495799 SNRPA1P09661 255 aaKnown RBP30.95■■■□□ 2.55
PPP1R3F-205ENST00000495799 NECTIN2Q92692 538 aa30.95■■■□□ 2.55
PPP1R3F-205ENST00000495799 ITGB4P16144 1822 aa30.95■■■□□ 2.54
PPP1R3F-205ENST00000495799 DBF4Q9UBU7 674 aaPredicted RBP30.94■■■□□ 2.54
PPP1R3F-205ENST00000495799 AFF2P51816 1311 aa30.94■■■□□ 2.54
PPP1R3F-205ENST00000495799 C5P01031 1676 aa30.94■■■□□ 2.54
PPP1R3F-205ENST00000495799 LAMB4A4D0S4 1761 aa30.93■■■□□ 2.54
PPP1R3F-205ENST00000495799 FLIIQ13045 1269 aa30.93■■■□□ 2.54
PPP1R3F-205ENST00000495799 ZNF496Q96IT1 587 aaPredicted RBP30.93■■■□□ 2.54
PPP1R3F-205ENST00000495799 RGS12O14924 1447 aa30.92■■■□□ 2.54
PPP1R3F-205ENST00000495799 FAM98CQ17RN3 349 aaKnown RBP30.92■■■□□ 2.54
PPP1R3F-205ENST00000495799 DOT1LQ8TEK3 1739 aa30.91■■■□□ 2.54
PPP1R3F-205ENST00000495799 CHPF2Q9P2E5 772 aa30.9■■■□□ 2.54
PPP1R3F-205ENST00000495799 FKBP5Q13451 457 aaPredicted RBP30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 INTS3Q68E01 1043 aaKnown RBP30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 G2E3Q7L622 706 aa30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 TRPC5Q9UL62 973 aaPredicted RBP30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 KCPQ6ZWJ8 1503 aa30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 ATRNO75882 1429 aa30.89■■■□□ 2.54
PPP1R3F-205ENST00000495799 THSD7AQ9UPZ6 1657 aa30.88■■■□□ 2.53
PPP1R3F-205ENST00000495799 PXDNLA1KZ92 1463 aa30.87■■■□□ 2.53
PPP1R3F-205ENST00000495799 BCL9O00512 1426 aa30.87■■■□□ 2.53
PPP1R3F-205ENST00000495799 GLI3P10071 1580 aa30.87■■■□□ 2.53
PPP1R3F-205ENST00000495799 HYPKQ9NX55 129 aa30.87■■■□□ 2.53
PPP1R3F-205ENST00000495799 GJD4Q96KN9 370 aaPredicted RBP30.86■■■□□ 2.53
PPP1R3F-205ENST00000495799 DDX21Q9NR30 783 aaKnown RBP eCLIP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms