RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
LMNA-215ENST00000495341 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
LMNA-215ENST00000495341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.46■■□□□ 1.19
LMNA-215ENST00000495341 MTHFSP49914 203 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 CABP4P57796 275 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 ITPK1Q13572 414 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
LMNA-215ENST00000495341 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 NLGN2Q8NFZ4 835 aa22.46■■□□□ 1.19
LMNA-215ENST00000495341 KDM6AO15550 1401 aaPredicted RBP22.46■■□□□ 1.19
LMNA-215ENST00000495341 RBM42Q9BTD8 480 aaKnown RBP22.45■■□□□ 1.18
LMNA-215ENST00000495341 GNPATO15228 680 aa22.44■■□□□ 1.18
LMNA-215ENST00000495341 PER1O15534 1290 aaPredicted RBP22.44■■□□□ 1.18
LMNA-215ENST00000495341 SSFA2P28290 1259 aa22.44■■□□□ 1.18
LMNA-215ENST00000495341 KDRP35968 1356 aa22.44■■□□□ 1.18
LMNA-215ENST00000495341 UBR3Q6ZT12 1888 aa22.41■■□□□ 1.18
LMNA-215ENST00000495341 HMOX1P09601 288 aa22.4■■□□□ 1.18
LMNA-215ENST00000495341 GOLGB1Q14789 3259 aaKnown RBP22.39■■□□□ 1.17
LMNA-215ENST00000495341 DIAPH1O60610 1272 aaKnown RBP22.38■■□□□ 1.17
LMNA-215ENST00000495341 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
LMNA-215ENST00000495341 PTCD1O75127 700 aaKnown RBP22.37■■□□□ 1.17
LMNA-215ENST00000495341 AKAP4Q5JQC9 854 aa22.37■■□□□ 1.17
LMNA-215ENST00000495341 NFATC2IPQ8NCF5 419 aa22.37■■□□□ 1.17
LMNA-215ENST00000495341 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
LMNA-215ENST00000495341 CD2APQ9Y5K6 639 aa22.36■■□□□ 1.17
LMNA-215ENST00000495341 NPC1L1Q9UHC9 1359 aa22.36■■□□□ 1.17
LMNA-215ENST00000495341 ZNF784Q8NCA9 323 aaPredicted RBP22.35■■□□□ 1.17
LMNA-215ENST00000495341 CNTNAP4Q9C0A0 1308 aa22.33■■□□□ 1.17
LMNA-215ENST00000495341 TRAPPC3LQ5T215 181 aa22.33■■□□□ 1.17
LMNA-215ENST00000495341 ZNF831Q5JPB2 1677 aa22.33■■□□□ 1.16
LMNA-215ENST00000495341 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
LMNA-215ENST00000495341 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.16
LMNA-215ENST00000495341 RC3H1Q5TC82 1133 aaKnown RBP22.32■■□□□ 1.16
LMNA-215ENST00000495341 GRIN3BO60391 1043 aa22.31■■□□□ 1.16
LMNA-215ENST00000495341 SLC52A2Q9HAB3 445 aa22.31■■□□□ 1.16
LMNA-215ENST00000495341 CHD4Q14839 1912 aa22.31■■□□□ 1.16
LMNA-215ENST00000495341 RNMTO43148 476 aaKnown RBP22.3■■□□□ 1.16
LMNA-215ENST00000495341 ADRA2BP18089 450 aa22.3■■□□□ 1.16
LMNA-215ENST00000495341 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
LMNA-215ENST00000495341 LGR6Q9HBX8 967 aa22.3■■□□□ 1.16
LMNA-215ENST00000495341 COL5A3P25940 1745 aaPredicted RBP22.3■■□□□ 1.16
LMNA-215ENST00000495341 COL3A1P02461 1466 aaPredicted RBP22.29■■□□□ 1.16
LMNA-215ENST00000495341 RPS6KA4O75676 772 aa22.29■■□□□ 1.16
LMNA-215ENST00000495341 MMP10P09238 476 aa22.29■■□□□ 1.16
LMNA-215ENST00000495341 RFC4P35249 363 aa22.29■■□□□ 1.16
LMNA-215ENST00000495341 ARHGEF1Q92888 912 aaKnown RBP22.29■■□□□ 1.16
LMNA-215ENST00000495341 SCN11AQ9UI33 1791 aa22.29■■□□□ 1.16
LMNA-215ENST00000495341 CRKLP46109 303 aaKnown RBP22.28■■□□□ 1.16
LMNA-215ENST00000495341 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
LMNA-215ENST00000495341 MRC1P22897 1456 aa22.27■■□□□ 1.16
LMNA-215ENST00000495341 NLGN1Q8N2Q7 840 aa22.26■■□□□ 1.15
LMNA-215ENST00000495341 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
LMNA-215ENST00000495341 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
LMNA-215ENST00000495341 TJP1Q07157 1748 aa22.24■■□□□ 1.15
LMNA-215ENST00000495341 GYS1P13807 737 aa22.24■■□□□ 1.15
LMNA-215ENST00000495341 CICQ96RK0 1608 aaPredicted RBP22.24■■□□□ 1.15
LMNA-215ENST00000495341 DNAJC10Q8IXB1 793 aa22.23■■□□□ 1.15
LMNA-215ENST00000495341 GAS2L2Q8NHY3 880 aa22.22■■□□□ 1.15
LMNA-215ENST00000495341 PARP3Q9Y6F1 533 aa22.21■■□□□ 1.15
LMNA-215ENST00000495341 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
LMNA-215ENST00000495341 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
LMNA-215ENST00000495341 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
LMNA-215ENST00000495341 SRP68Q9UHB9 627 aaKnown RBP22.2■■□□□ 1.14
LMNA-215ENST00000495341 GNAT3A8MTJ3 354 aa22.19■■□□□ 1.14
LMNA-215ENST00000495341 INTS5Q6P9B9 1019 aaKnown RBP22.19■■□□□ 1.14
LMNA-215ENST00000495341 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
LMNA-215ENST00000495341 USP42Q9H9J4 1324 aaKnown RBP22.19■■□□□ 1.14
LMNA-215ENST00000495341 KCPQ6ZWJ8 1503 aa22.19■■□□□ 1.14
LMNA-215ENST00000495341 ADAMTS7Q9UKP4 1686 aa22.19■■□□□ 1.14
LMNA-215ENST00000495341 C10orf71Q711Q0 1435 aa22.18■■□□□ 1.14
LMNA-215ENST00000495341 TEFQ10587 303 aa22.18■■□□□ 1.14
LMNA-215ENST00000495341 TTC5Q8N0Z6 440 aa22.18■■□□□ 1.14
LMNA-215ENST00000495341 PXDNLA1KZ92 1463 aa22.17■■□□□ 1.14
LMNA-215ENST00000495341 PPP2R1AP30153 589 aa22.17■■□□□ 1.14
LMNA-215ENST00000495341 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
LMNA-215ENST00000495341 VIRMAQ69YN4 1812 aaKnown RBP22.16■■□□□ 1.14
LMNA-215ENST00000495341 CYP19A1P11511 503 aaPredicted RBP22.16■■□□□ 1.14
LMNA-215ENST00000495341 ZPR1O75312 459 aa22.15■■□□□ 1.14
LMNA-215ENST00000495341 TGFB2P61812 414 aa22.15■■□□□ 1.14
LMNA-215ENST00000495341 FKBP8Q14318 412 aa22.15■■□□□ 1.14
LMNA-215ENST00000495341 RSPH6AQ9H0K4 717 aa22.15■■□□□ 1.14
LMNA-215ENST00000495341 SOS1Q07889 1333 aaPredicted RBP22.14■■□□□ 1.14
LMNA-215ENST00000495341 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.13
LMNA-215ENST00000495341 U2AF1L5P0DN76 240 aaPredicted RBP22.14■■□□□ 1.13
LMNA-215ENST00000495341 U2AF1Q01081 240 aaKnown RBP eCLIP22.14■■□□□ 1.13
LMNA-215ENST00000495341 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.13
LMNA-215ENST00000495341 IL17REQ8NFR9 667 aa22.14■■□□□ 1.13
LMNA-215ENST00000495341 ZBTB1Q9Y2K1 713 aa22.14■■□□□ 1.13
LMNA-215ENST00000495341 COL15A1P39059 1388 aa22.13■■□□□ 1.13
LMNA-215ENST00000495341 A0A0G2JLW4 131 aa22.13■■□□□ 1.13
LMNA-215ENST00000495341 USPL1Q5W0Q7 1092 aa22.13■■□□□ 1.13
LMNA-215ENST00000495341 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
LMNA-215ENST00000495341 BCS1LQ9Y276 419 aa22.12■■□□□ 1.13
LMNA-215ENST00000495341 KIF13BQ9NQT8 1826 aa22.12■■□□□ 1.13
LMNA-215ENST00000495341 ATP10DQ9P241 1426 aa22.12■■□□□ 1.13
LMNA-215ENST00000495341 ZNF790Q6PG37 636 aa22.11■■□□□ 1.13
LMNA-215ENST00000495341 STARD3NLO95772 234 aa22.1■■□□□ 1.13
LMNA-215ENST00000495341 DPEP1P16444 411 aa22.1■■□□□ 1.13
LMNA-215ENST00000495341 CANXP27824 592 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms