RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
CCDC30-211ENST00000495044 BCS1LQ9Y276 419 aa10.26□□□□□ -0.77
CCDC30-211ENST00000495044 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
CCDC30-211ENST00000495044 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
CCDC30-211ENST00000495044 TGFB2P61812 414 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 C4AP0C0L4 1744 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 ANKRD26Q9UPS8 1709 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 BRCA1P38398 1863 aaKnown RBP10.24□□□□□ -0.77
CCDC30-211ENST00000495044 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
CCDC30-211ENST00000495044 TMF1P82094 1093 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
CCDC30-211ENST00000495044 PLEKHG2Q9H7P9 1386 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 A0A0G2JLW4 131 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 ITPK1Q13572 414 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
CCDC30-211ENST00000495044 NMRK2Q9NPI5 230 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 CCDC87Q9NVE4 849 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
CCDC30-211ENST00000495044 FCHSD2O94868 740 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 TRAPPC3LQ5T215 181 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 NLGN1Q8N2Q7 840 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 DNAJC5GQ8N7S2 189 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
CCDC30-211ENST00000495044 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
CCDC30-211ENST00000495044 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
CCDC30-211ENST00000495044 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
CCDC30-211ENST00000495044 ZNF831Q5JPB2 1677 aa10.22□□□□□ -0.77
CCDC30-211ENST00000495044 TNRC6CQ9HCJ0 1690 aaKnown RBP10.22□□□□□ -0.77
CCDC30-211ENST00000495044 IFNL2Q8IZJ0 200 aa10.21□□□□□ -0.77
CCDC30-211ENST00000495044 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
CCDC30-211ENST00000495044 DPEP1P16444 411 aa10.21□□□□□ -0.78
CCDC30-211ENST00000495044 CDCA8Q53HL2 280 aa10.21□□□□□ -0.78
CCDC30-211ENST00000495044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.78
CCDC30-211ENST00000495044 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 PHKG2P15735 406 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 RFC4P35249 363 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 C9orf131Q5VYM1 1079 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 KLRG1Q96E93 195 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 RBM42Q9BTD8 480 aaKnown RBP10.2□□□□□ -0.78
CCDC30-211ENST00000495044 ATG3Q9NT62 314 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 KDRP35968 1356 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
CCDC30-211ENST00000495044 CAPN15O75808 1086 aa10.19□□□□□ -0.78
CCDC30-211ENST00000495044 FSTL1Q12841 308 aa10.19□□□□□ -0.78
CCDC30-211ENST00000495044 HTRA3P83110 453 aa10.18□□□□□ -0.78
CCDC30-211ENST00000495044 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
CCDC30-211ENST00000495044 EYA1Q99502 592 aa10.18□□□□□ -0.78
CCDC30-211ENST00000495044 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
CCDC30-211ENST00000495044 WASHC2AQ641Q2 1341 aa10.18□□□□□ -0.78
CCDC30-211ENST00000495044 CNTNAP4Q9C0A0 1308 aa10.18□□□□□ -0.78
CCDC30-211ENST00000495044 GYS1P13807 737 aa10.17□□□□□ -0.78
CCDC30-211ENST00000495044 DALRD3Q5D0E6 543 aaKnown RBP10.17□□□□□ -0.78
CCDC30-211ENST00000495044 COL13A1Q5TAT6 717 aaPredicted RBP10.17□□□□□ -0.78
CCDC30-211ENST00000495044 RNF181Q9P0P0 153 aa10.17□□□□□ -0.78
CCDC30-211ENST00000495044 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
CCDC30-211ENST00000495044 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
CCDC30-211ENST00000495044 JMYQ8N9B5 988 aa10.17□□□□□ -0.78
CCDC30-211ENST00000495044 RPS6KA4O75676 772 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 HSP90AB1P08238 724 aaKnown RBP10.16□□□□□ -0.78
CCDC30-211ENST00000495044 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 DCAF5Q96JK2 942 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 SBF1O95248 1867 aa10.16□□□□□ -0.78
CCDC30-211ENST00000495044 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
CCDC30-211ENST00000495044 CARD14Q9BXL6 1004 aa10.15□□□□□ -0.78
CCDC30-211ENST00000495044 MYH14Q7Z406 1995 aaKnown RBP10.15□□□□□ -0.78
CCDC30-211ENST00000495044 KCNA3P22001 575 aa10.14□□□□□ -0.79
CCDC30-211ENST00000495044 CABP4P57796 275 aa10.14□□□□□ -0.79
CCDC30-211ENST00000495044 TJP1Q07157 1748 aa10.14□□□□□ -0.79
CCDC30-211ENST00000495044 TIAM2Q8IVF5 1701 aa10.14□□□□□ -0.79
CCDC30-211ENST00000495044 PRELPP51888 382 aa10.13□□□□□ -0.79
CCDC30-211ENST00000495044 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
CCDC30-211ENST00000495044 USP42Q9H9J4 1324 aaKnown RBP10.13□□□□□ -0.79
CCDC30-211ENST00000495044 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 CHRNA5P30532 468 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 FKBP8Q14318 412 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 ZNF530Q6P9A1 599 aaPredicted RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 POLKQ9UBT6 870 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 SRP68Q9UHB9 627 aaKnown RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 KDM6AO15550 1401 aaPredicted RBP10.12□□□□□ -0.79
CCDC30-211ENST00000495044 DDR1Q08345 913 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 DLEC1Q9Y238 1755 aa10.12□□□□□ -0.79
CCDC30-211ENST00000495044 AMOTQ4VCS5 1084 aa10.11□□□□□ -0.79
CCDC30-211ENST00000495044 ZPR1O75312 459 aa10.11□□□□□ -0.79
CCDC30-211ENST00000495044 HSPA1AP0DMV8 641 aaKnown RBP10.11□□□□□ -0.79
CCDC30-211ENST00000495044 HSPA1BP0DMV9 641 aaKnown RBP10.11□□□□□ -0.79
CCDC30-211ENST00000495044 MTHFSP49914 203 aa10.11□□□□□ -0.79
CCDC30-211ENST00000495044 RASSF7Q02833 373 aa10.11□□□□□ -0.79
CCDC30-211ENST00000495044 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
CCDC30-211ENST00000495044 CCDC88AQ3V6T2 1871 aa10.1□□□□□ -0.79
CCDC30-211ENST00000495044 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms