RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 PTPRTO14522 1441 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 PLEKHD1A6NEE1 506 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 EIF3CLB5ME19 914 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 PTGER2P43116 358 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 MAGEA9P43362 315 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 TPM4P67936 248 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 LRMPQ12912 555 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 ZKSCAN8Q15776 578 aaPredicted RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 ZC3H12AQ5D1E8 599 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 RNF166Q96A37 237 aaPredicted RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 EIF3CQ99613 913 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 PLEKHA4Q9H4M7 779 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 GDPD2Q9HCC8 539 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 CPSF2Q9P2I0 782 aaKnown RBP4.81□□□□□ -1.64
ATG3-207ENST00000494571 MAGI2Q86UL8 1455 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 NEO1Q92859 1461 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 UGGT2Q9NYU1 1516 aa4.81□□□□□ -1.64
ATG3-207ENST00000494571 TTC37Q6PGP7 1564 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 SMC2O95347 1197 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 TPM1P09493 284 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 LIG1P18858 919 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 GORABQ5T7V8 394 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 MFSD4BQ5TF39 518 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 FOXR1Q6PIV2 292 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 NLRP13Q86W25 1043 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 CREBRFQ8IUR6 639 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 ITFG2Q969R8 447 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 KIF1BPQ96EK5 621 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 CCDC97Q96F63 343 aaPredicted RBP4.8□□□□□ -1.64
ATG3-207ENST00000494571 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 G3BP2Q9UN86 482 aaKnown RBP4.8□□□□□ -1.64
ATG3-207ENST00000494571 PCDHB15Q9Y5E8 787 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 ECEL1O95672 775 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 OAS2P29728 719 aaKnown RBP4.8□□□□□ -1.64
ATG3-207ENST00000494571 GSCP56915 257 aaPredicted RBP4.8□□□□□ -1.64
ATG3-207ENST00000494571 GOLGA2Q08379 1002 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 TMEM132AQ24JP5 1023 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 DUSP27Q5VZP5 1158 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 MMS22LQ6ZRQ5 1243 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 PPM1EQ8WY54 764 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 PAIP2Q9BPZ3 127 aaKnown RBP4.8□□□□□ -1.64
ATG3-207ENST00000494571 RPS6KL1Q9Y6S9 549 aa4.8□□□□□ -1.64
ATG3-207ENST00000494571 BRD4O60885 1362 aaPredicted RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 CCDC196A0A1B0GTZ2 297 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 RGS20O76081 388 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 IPO7O95373 1038 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 HMGB1P09429 215 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 PNMA6AP0CW24 399 aaPredicted RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 PLA2G4AP47712 749 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 NUCB2P80303 420 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 SF3A1Q15459 793 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 ERCC6LQ2NKX8 1250 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 AP1ARQ63HQ0 302 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 CEP135Q66GS9 1140 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 CASC1Q6TDU7 716 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 FBXO18Q8NFZ0 1043 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 SNX21Q969T3 373 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 AK7Q96M32 723 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 JPH2Q9BR39 696 aaPredicted RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 CHIC2Q9UKJ5 165 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 LMTK3Q96Q04 1460 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 ROCK2O75116 1388 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 PLEKHG2Q9H7P9 1386 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 KLHL33A6NCF5 533 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 AP1G2O75843 785 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 SEC31AO94979 1220 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 GBP6Q6ZN66 633 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 GOLGA5Q8TBA6 731 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 SYTL4Q96C24 671 aaPredicted RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 RRP7BPQ9NSQ0 103 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 TRMT1Q9NXH9 659 aaKnown RBP4.79□□□□□ -1.64
ATG3-207ENST00000494571 TNNQ9UQP3 1299 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 KNSTRNQ9Y448 316 aa4.79□□□□□ -1.64
ATG3-207ENST00000494571 CGNL1Q0VF96 1302 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 PEX19P40855 299 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 INHBEP58166 350 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 ATP2B2Q01814 1243 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 SYAP1Q96A49 352 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 FHOD1Q9Y613 1164 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 ARHGEF40Q8TER5 1519 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 RTEL1-TNFRSF6BF6WH68 1400 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 NCOA3Q9Y6Q9 1424 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 EIF3AQ14152 1382 aaKnown RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 KIF15Q9NS87 1388 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 NPC1L1Q9UHC9 1359 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 SKAP2O75563 359 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 NAP1L1P55209 391 aaKnown RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 SYCP1Q15431 976 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 TMCO3Q6UWJ1 677 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 NOL8Q76FK4 1167 aaKnown RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 CCDC186Q7Z3E2 898 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 SLAIN1Q8ND83 568 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 CHMP7Q8WUX9 453 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 N4BP2L2Q92802 583 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms