RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GPC1P35052 558 aa6.03□□□□□ -1.44
PTPN12-212ENST00000494248 PTK2Q05397 1052 aa6.03□□□□□ -1.44
PTPN12-212ENST00000494248 NBPF20Q3BBV1 942 aa6.03□□□□□ -1.44
PTPN12-212ENST00000494248 EPS8L1Q8TE68 723 aa6.03□□□□□ -1.44
PTPN12-212ENST00000494248 ATP5J2-PTCD1G3V325 749 aa6.02□□□□□ -1.45
PTPN12-212ENST00000494248 CFHR5Q9BXR6 569 aa6.02□□□□□ -1.45
PTPN12-212ENST00000494248 ZC3H4Q9UPT8 1303 aaKnown RBP6.01□□□□□ -1.45
PTPN12-212ENST00000494248 F11P03951 625 aa6.01□□□□□ -1.45
PTPN12-212ENST00000494248 SPATA31C2B4DYI2 1134 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 GNB5O14775 395 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 DGKGP49619 791 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 CLK2P49760 499 aaKnown RBP6□□□□□ -1.45
PTPN12-212ENST00000494248 BTBD6Q96KE9 485 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 TIMMDC1Q9NPL8 285 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 GDF2Q9UK05 429 aaPredicted RBP6□□□□□ -1.45
PTPN12-212ENST00000494248 GPSM3Q9Y4H4 160 aa6□□□□□ -1.45
PTPN12-212ENST00000494248 SLC27A3Q5K4L6 730 aa5.99□□□□□ -1.45
PTPN12-212ENST00000494248 DZIP3Q86Y13 1208 aaKnown RBP5.99□□□□□ -1.45
PTPN12-212ENST00000494248 ZC3H15Q8WU90 426 aaKnown RBP5.99□□□□□ -1.45
PTPN12-212ENST00000494248 POLR3EQ9NVU0 708 aa5.99□□□□□ -1.45
PTPN12-212ENST00000494248 GGA1Q9UJY5 639 aa5.99□□□□□ -1.45
PTPN12-212ENST00000494248 AMPD1P23109 780 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 CTBSQ01459 385 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 WDR44Q5JSH3 913 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 PPP2R2DQ66LE6 453 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 SLCO4C1Q6ZQN7 724 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 GOLGA6L1Q8N7Z2 621 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 GPAMQ9HCL2 828 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 TPSG1Q9NRR2 321 aa5.98□□□□□ -1.45
PTPN12-212ENST00000494248 WASLO00401 505 aaPredicted RBP5.97□□□□□ -1.45
PTPN12-212ENST00000494248 GIGYF1O75420 1035 aaPredicted RBP5.97□□□□□ -1.45
PTPN12-212ENST00000494248 EPXP11678 715 aa5.97□□□□□ -1.45
PTPN12-212ENST00000494248 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
PTPN12-212ENST00000494248 CLN3Q13286 438 aa5.96□□□□□ -1.46
PTPN12-212ENST00000494248 NDFIP2Q9NV92 336 aa5.96□□□□□ -1.46
PTPN12-212ENST00000494248 HCN2Q9UL51 889 aa5.96□□□□□ -1.46
PTPN12-212ENST00000494248 SCTRP47872 440 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 ERVK-9P63128 1117 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 TAS1R3Q7RTX0 852 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 SEPT12Q8IYM1 358 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 TRIM11Q96F44 468 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 ABHD17AQ96GS6 310 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 NLRP3Q96P20 1036 aa5.95□□□□□ -1.46
PTPN12-212ENST00000494248 HMX1Q9NP08 348 aaPredicted RBP5.95□□□□□ -1.46
PTPN12-212ENST00000494248 PIK3R2O00459 728 aa5.94□□□□□ -1.46
PTPN12-212ENST00000494248 BNIP3LO60238 219 aa5.94□□□□□ -1.46
PTPN12-212ENST00000494248 BMP4P12644 408 aa5.94□□□□□ -1.46
PTPN12-212ENST00000494248 PHKA2P46019 1235 aa5.94□□□□□ -1.46
PTPN12-212ENST00000494248 KLF15Q9UIH9 416 aa5.94□□□□□ -1.46
PTPN12-212ENST00000494248 RNF135Q8IUD6 432 aa5.93□□□□□ -1.46
PTPN12-212ENST00000494248 RUBCNLQ9H714 662 aa5.93□□□□□ -1.46
PTPN12-212ENST00000494248 ARHGEF10LQ9HCE6 1279 aa5.93□□□□□ -1.46
PTPN12-212ENST00000494248 PHF24Q9UPV7 400 aa5.93□□□□□ -1.46
PTPN12-212ENST00000494248 NEURL1BA8MQ27 555 aa5.92□□□□□ -1.46
PTPN12-212ENST00000494248 FGFR3P22607 806 aa5.92□□□□□ -1.46
PTPN12-212ENST00000494248 CC2D2BQ6DHV5 1058 aa5.92□□□□□ -1.46
PTPN12-212ENST00000494248 OSBPL3Q9H4L5 887 aa5.92□□□□□ -1.46
PTPN12-212ENST00000494248 RAB6BQ9NRW1 208 aa5.92□□□□□ -1.46
PTPN12-212ENST00000494248 NOP53Q9NZM5 478 aaKnown RBP5.92□□□□□ -1.46
PTPN12-212ENST00000494248 TRAK2O60296 914 aa5.91□□□□□ -1.46
PTPN12-212ENST00000494248 HAP1P54257 671 aaPredicted RBP5.91□□□□□ -1.46
PTPN12-212ENST00000494248 CHSY3Q70JA7 882 aa5.91□□□□□ -1.46
PTPN12-212ENST00000494248 ATXN7L1Q9ULK2 861 aaPredicted RBP5.91□□□□□ -1.46
PTPN12-212ENST00000494248 IL2RAP01589 272 aa5.9□□□□□ -1.46
PTPN12-212ENST00000494248 PDE4DQ08499 809 aa5.9□□□□□ -1.46
PTPN12-212ENST00000494248 PROCA1Q8NCQ7 364 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-212ENST00000494248 AK7Q96M32 723 aa5.9□□□□□ -1.46
PTPN12-212ENST00000494248 HRH3Q9Y5N1 445 aa5.9□□□□□ -1.46
PTPN12-212ENST00000494248 ARAFP10398 606 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 ELNP15502 786 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 MSX1P28360 303 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 CENPCQ03188 943 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 FCHSD1Q86WN1 690 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 PLVAPQ9BX97 442 aa5.89□□□□□ -1.47
PTPN12-212ENST00000494248 A0A1B0GTH6 734 aa5.88□□□□□ -1.47
PTPN12-212ENST00000494248 C4orf17Q53FE4 359 aa5.88□□□□□ -1.47
PTPN12-212ENST00000494248 CNKSR1Q969H4 720 aa5.88□□□□□ -1.47
PTPN12-212ENST00000494248 AP1G2O75843 785 aa5.87□□□□□ -1.47
PTPN12-212ENST00000494248 LBRQ14739 615 aaKnown RBP5.87□□□□□ -1.47
PTPN12-212ENST00000494248 CYP2U1Q7Z449 544 aa5.87□□□□□ -1.47
PTPN12-212ENST00000494248 ESYT1Q9BSJ8 1104 aa5.87□□□□□ -1.47
PTPN12-212ENST00000494248 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN12-212ENST00000494248 FHDC1Q9C0D6 1143 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-212ENST00000494248 DNAAF2Q9NVR5 837 aaKnown RBP5.87□□□□□ -1.47
PTPN12-212ENST00000494248 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 SPATA31C1P0DKV0 1188 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 TAL1P17542 331 aaPredicted RBP5.86□□□□□ -1.47
PTPN12-212ENST00000494248 IRAK1P51617 712 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 TRIM34Q9BYJ4 488 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 RSPH6AQ9H0K4 717 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 PCDHB9Q9Y5E1 797 aa5.86□□□□□ -1.47
PTPN12-212ENST00000494248 USP17L8P0C7I0 530 aa5.84□□□□□ -1.47
PTPN12-212ENST00000494248 ZSCAN10Q96SZ4 725 aaPredicted RBP5.84□□□□□ -1.47
PTPN12-212ENST00000494248 ZCCHC2Q9C0B9 1178 aaKnown RBP5.84□□□□□ -1.47
PTPN12-212ENST00000494248 CRISPLD1Q9H336 500 aa5.84□□□□□ -1.47
PTPN12-212ENST00000494248 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 FBXO45P0C2W1 286 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 CSB-PGBD3P0DP91 1061 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 COL9A3Q14050 684 aaPredicted RBP5.83□□□□□ -1.48
PTPN12-212ENST00000494248 EFHC2Q5JST6 749 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms