RNA–Protein interactions for RNA: ENST00000493677.5

GPM6B-210, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-210ENST00000493677 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
GPM6B-210ENST00000493677 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
GPM6B-210ENST00000493677 ROBO2Q9HCK4 1378 aa11.02□□□□□ -0.64
GPM6B-210ENST00000493677 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.65
GPM6B-210ENST00000493677 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
GPM6B-210ENST00000493677 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
GPM6B-210ENST00000493677 SMAPO00193 183 aa11.02□□□□□ -0.65
GPM6B-210ENST00000493677 KCNA6P17658 529 aa11.02□□□□□ -0.65
GPM6B-210ENST00000493677 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
GPM6B-210ENST00000493677 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
GPM6B-210ENST00000493677 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 XRN1Q8IZH2 1706 aaKnown RBP11.01□□□□□ -0.65
GPM6B-210ENST00000493677 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 GLMNQ92990 594 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
GPM6B-210ENST00000493677 QRICH2Q9H0J4 1663 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 TECPR2O15040 1411 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 POM121CA8CG34 1229 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 USP46P62068 366 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 POGKQ9P215 609 aa11□□□□□ -0.65
GPM6B-210ENST00000493677 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.99□□□□□ -0.65
GPM6B-210ENST00000493677 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
GPM6B-210ENST00000493677 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
GPM6B-210ENST00000493677 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
GPM6B-210ENST00000493677 KIF7Q2M1P5 1343 aa10.98□□□□□ -0.65
GPM6B-210ENST00000493677 CCDC7Q96M83 1385 aa10.98□□□□□ -0.65
GPM6B-210ENST00000493677 HOXA2O43364 376 aa10.98□□□□□ -0.65
GPM6B-210ENST00000493677 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
GPM6B-210ENST00000493677 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
GPM6B-210ENST00000493677 FDX1P10109 184 aa10.97□□□□□ -0.65
GPM6B-210ENST00000493677 POLR3GLQ9BT43 218 aa10.97□□□□□ -0.65
GPM6B-210ENST00000493677 SCUBE2Q9NQ36 999 aa10.97□□□□□ -0.65
GPM6B-210ENST00000493677 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
GPM6B-210ENST00000493677 GCGRP47871 477 aa10.96□□□□□ -0.65
GPM6B-210ENST00000493677 TMF1P82094 1093 aa10.96□□□□□ -0.65
GPM6B-210ENST00000493677 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
GPM6B-210ENST00000493677 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
GPM6B-210ENST00000493677 NWD1Q149M9 1564 aa10.96□□□□□ -0.66
GPM6B-210ENST00000493677 TULP4Q9NRJ4 1543 aa10.95□□□□□ -0.66
GPM6B-210ENST00000493677 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
GPM6B-210ENST00000493677 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
GPM6B-210ENST00000493677 LRRC7Q96NW7 1537 aa10.95□□□□□ -0.66
GPM6B-210ENST00000493677 CDK19Q9BWU1 502 aa10.94□□□□□ -0.66
GPM6B-210ENST00000493677 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
GPM6B-210ENST00000493677 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
GPM6B-210ENST00000493677 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
GPM6B-210ENST00000493677 WASLO00401 505 aaPredicted RBP10.92□□□□□ -0.66
GPM6B-210ENST00000493677 GUCA2AQ02747 115 aa10.92□□□□□ -0.66
GPM6B-210ENST00000493677 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
GPM6B-210ENST00000493677 TSC1Q92574 1164 aa10.92□□□□□ -0.66
GPM6B-210ENST00000493677 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
GPM6B-210ENST00000493677 EVC2Q86UK5 1308 aa10.92□□□□□ -0.66
GPM6B-210ENST00000493677 MTMR2Q13614 643 aa10.91□□□□□ -0.66
GPM6B-210ENST00000493677 WASHC4Q2M389 1173 aa10.91□□□□□ -0.66
GPM6B-210ENST00000493677 MAMSTRQ6ZN01 415 aa10.91□□□□□ -0.66
GPM6B-210ENST00000493677 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
GPM6B-210ENST00000493677 RGPD8O14715 1765 aaPredicted RBP10.91□□□□□ -0.66
GPM6B-210ENST00000493677 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
GPM6B-210ENST00000493677 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
GPM6B-210ENST00000493677 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
GPM6B-210ENST00000493677 PRR36Q9H6K5 1346 aa10.9□□□□□ -0.66
GPM6B-210ENST00000493677 TMEM94Q12767 1356 aa10.9□□□□□ -0.66
GPM6B-210ENST00000493677 MYOM1P52179 1685 aa10.9□□□□□ -0.66
GPM6B-210ENST00000493677 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.67
GPM6B-210ENST00000493677 SLC4A3P48751 1232 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.67
GPM6B-210ENST00000493677 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 PDE4CQ08493 712 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 IRF5Q13568 498 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 HLA-CQ95604 372 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.67
GPM6B-210ENST00000493677 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
GPM6B-210ENST00000493677 ADGRB2O60241 1585 aa10.89□□□□□ -0.67
GPM6B-210ENST00000493677 SNPHO15079 494 aa10.89□□□□□ -0.67
GPM6B-210ENST00000493677 SLC10A3P09131 477 aa10.89□□□□□ -0.67
GPM6B-210ENST00000493677 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
GPM6B-210ENST00000493677 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
GPM6B-210ENST00000493677 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
GPM6B-210ENST00000493677 CDCA8Q53HL2 280 aa10.88□□□□□ -0.67
GPM6B-210ENST00000493677 USP32Q8NFA0 1604 aa10.88□□□□□ -0.67
GPM6B-210ENST00000493677 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
GPM6B-210ENST00000493677 PANK3Q9H999 370 aa10.88□□□□□ -0.67
GPM6B-210ENST00000493677 ADGRL3Q9HAR2 1447 aa10.88□□□□□ -0.67
GPM6B-210ENST00000493677 CDK12Q9NYV4 1490 aaPredicted RBP10.88□□□□□ -0.67
GPM6B-210ENST00000493677 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 GRIPAP1Q4V328 841 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
GPM6B-210ENST00000493677 TMC1Q8TDI8 760 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 CABP1Q9NZU7 370 aa10.87□□□□□ -0.67
GPM6B-210ENST00000493677 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
GPM6B-210ENST00000493677 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
GPM6B-210ENST00000493677 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
GPM6B-210ENST00000493677 TRIM34Q9BYJ4 488 aa10.86□□□□□ -0.67
GPM6B-210ENST00000493677 PER1O15534 1290 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms