RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
ATG4B-223ENST00000493618 ITPK1Q13572 414 aa19.94■□□□□ 0.78
ATG4B-223ENST00000493618 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
ATG4B-223ENST00000493618 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
ATG4B-223ENST00000493618 MTHFSP49914 203 aa19.93■□□□□ 0.78
ATG4B-223ENST00000493618 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-223ENST00000493618 GPR162Q16538 588 aa19.92■□□□□ 0.78
ATG4B-223ENST00000493618 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
ATG4B-223ENST00000493618 FLAD1Q8NFF5 587 aa19.92■□□□□ 0.78
ATG4B-223ENST00000493618 DCAF5Q96JK2 942 aa19.92■□□□□ 0.78
ATG4B-223ENST00000493618 UTRNP46939 3433 aa19.92■□□□□ 0.78
ATG4B-223ENST00000493618 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
ATG4B-223ENST00000493618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.91■□□□□ 0.78
ATG4B-223ENST00000493618 ERVV-2B6SEH9 535 aa19.91■□□□□ 0.78
ATG4B-223ENST00000493618 HSP90AB1P08238 724 aaKnown RBP19.91■□□□□ 0.78
ATG4B-223ENST00000493618 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
ATG4B-223ENST00000493618 RBM42Q9BTD8 480 aaKnown RBP19.91■□□□□ 0.78
ATG4B-223ENST00000493618 HMGB2P26583 209 aaKnown RBP19.9■□□□□ 0.78
ATG4B-223ENST00000493618 CABP4P57796 275 aa19.9■□□□□ 0.78
ATG4B-223ENST00000493618 KDRP35968 1356 aa19.9■□□□□ 0.78
ATG4B-223ENST00000493618 GNPATO15228 680 aa19.89■□□□□ 0.77
ATG4B-223ENST00000493618 HMOX1P09601 288 aa19.89■□□□□ 0.77
ATG4B-223ENST00000493618 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
ATG4B-223ENST00000493618 MYH14Q7Z406 1995 aaKnown RBP19.88■□□□□ 0.77
ATG4B-223ENST00000493618 TJP1Q07157 1748 aa19.88■□□□□ 0.77
ATG4B-223ENST00000493618 SSFA2P28290 1259 aa19.87■□□□□ 0.77
ATG4B-223ENST00000493618 C4AP0C0L4 1744 aa19.86■□□□□ 0.77
ATG4B-223ENST00000493618 GOLGB1Q14789 3259 aaKnown RBP19.85■□□□□ 0.77
ATG4B-223ENST00000493618 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
ATG4B-223ENST00000493618 DIAPH1O60610 1272 aaKnown RBP19.84■□□□□ 0.77
ATG4B-223ENST00000493618 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
ATG4B-223ENST00000493618 YBX3P16989 372 aaKnown RBP eCLIP19.83■□□□□ 0.77
ATG4B-223ENST00000493618 COL3A1P02461 1466 aaPredicted RBP19.83■□□□□ 0.76
ATG4B-223ENST00000493618 AKAP4Q5JQC9 854 aa19.82■□□□□ 0.76
ATG4B-223ENST00000493618 LGR6Q9HBX8 967 aa19.82■□□□□ 0.76
ATG4B-223ENST00000493618 ZNF784Q8NCA9 323 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-223ENST00000493618 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
ATG4B-223ENST00000493618 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
ATG4B-223ENST00000493618 WWC3Q9ULE0 1092 aa19.8■□□□□ 0.76
ATG4B-223ENST00000493618 CD2APQ9Y5K6 639 aa19.8■□□□□ 0.76
ATG4B-223ENST00000493618 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
ATG4B-223ENST00000493618 NPC1L1Q9UHC9 1359 aa19.8■□□□□ 0.76
ATG4B-223ENST00000493618 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-223ENST00000493618 CICQ96RK0 1608 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-223ENST00000493618 TRAPPC3LQ5T215 181 aa19.79■□□□□ 0.76
ATG4B-223ENST00000493618 CNTNAP4Q9C0A0 1308 aa19.78■□□□□ 0.76
ATG4B-223ENST00000493618 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
ATG4B-223ENST00000493618 RNMTO43148 476 aaKnown RBP19.78■□□□□ 0.76
ATG4B-223ENST00000493618 KIF13BQ9NQT8 1826 aa19.78■□□□□ 0.76
ATG4B-223ENST00000493618 MRC1P22897 1456 aa19.78■□□□□ 0.76
ATG4B-223ENST00000493618 KIAA1551Q9HCM1 1747 aa19.77■□□□□ 0.76
ATG4B-223ENST00000493618 RC3H1Q5TC82 1133 aaKnown RBP19.77■□□□□ 0.76
ATG4B-223ENST00000493618 ARHGEF1Q92888 912 aaKnown RBP19.77■□□□□ 0.76
ATG4B-223ENST00000493618 SLC52A2Q9HAB3 445 aa19.77■□□□□ 0.76
ATG4B-223ENST00000493618 RPS6KA4O75676 772 aa19.76■□□□□ 0.75
ATG4B-223ENST00000493618 MMP10P09238 476 aa19.76■□□□□ 0.75
ATG4B-223ENST00000493618 SLC39A6Q13433 755 aa19.76■□□□□ 0.75
ATG4B-223ENST00000493618 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
ATG4B-223ENST00000493618 CRKLP46109 303 aaKnown RBP19.75■□□□□ 0.75
ATG4B-223ENST00000493618 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-223ENST00000493618 RFC4P35249 363 aa19.74■□□□□ 0.75
ATG4B-223ENST00000493618 KCPQ6ZWJ8 1503 aa19.74■□□□□ 0.75
ATG4B-223ENST00000493618 GRIN3BO60391 1043 aa19.73■□□□□ 0.75
ATG4B-223ENST00000493618 DNAJC10Q8IXB1 793 aa19.73■□□□□ 0.75
ATG4B-223ENST00000493618 GYS1P13807 737 aa19.72■□□□□ 0.75
ATG4B-223ENST00000493618 ADRA2BP18089 450 aa19.72■□□□□ 0.75
ATG4B-223ENST00000493618 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
ATG4B-223ENST00000493618 NLGN1Q8N2Q7 840 aa19.71■□□□□ 0.75
ATG4B-223ENST00000493618 INTS5Q6P9B9 1019 aaKnown RBP19.7■□□□□ 0.74
ATG4B-223ENST00000493618 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
ATG4B-223ENST00000493618 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
ATG4B-223ENST00000493618 PXDNLA1KZ92 1463 aa19.68■□□□□ 0.74
ATG4B-223ENST00000493618 PPP2R1AP30153 589 aa19.68■□□□□ 0.74
ATG4B-223ENST00000493618 CCDC87Q9NVE4 849 aa19.68■□□□□ 0.74
ATG4B-223ENST00000493618 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
ATG4B-223ENST00000493618 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
ATG4B-223ENST00000493618 C10orf71Q711Q0 1435 aa19.67■□□□□ 0.74
ATG4B-223ENST00000493618 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-223ENST00000493618 PRKAR2BP31323 418 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 FKBP8Q14318 412 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 IL17REQ8NFR9 667 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 GAS2L2Q8NHY3 880 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
ATG4B-223ENST00000493618 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
ATG4B-223ENST00000493618 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
ATG4B-223ENST00000493618 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
ATG4B-223ENST00000493618 TEFQ10587 303 aa19.64■□□□□ 0.73
ATG4B-223ENST00000493618 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-223ENST00000493618 DLG5Q8TDM6 1919 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 DDR1Q08345 913 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 USPL1Q5W0Q7 1092 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 TTC5Q8N0Z6 440 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 ZBTB1Q9Y2K1 713 aa19.63■□□□□ 0.73
ATG4B-223ENST00000493618 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
ATG4B-223ENST00000493618 COL15A1P39059 1388 aa19.62■□□□□ 0.73
ATG4B-223ENST00000493618 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
ATG4B-223ENST00000493618 DPEP1P16444 411 aa19.62■□□□□ 0.73
ATG4B-223ENST00000493618 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms