RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CHIC2Q9UKJ5 165 aa7.4□□□□□ -1.22
PTCD3-218ENST00000493430 IGF1RP08069 1367 aa7.39□□□□□ -1.23
PTCD3-218ENST00000493430 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
PTCD3-218ENST00000493430 CELA2BP08218 269 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-218ENST00000493430 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-218ENST00000493430 PHKA2P46019 1235 aa7.39□□□□□ -1.23
PTCD3-218ENST00000493430 SEMA3FQ13275 785 aa7.39□□□□□ -1.23
PTCD3-218ENST00000493430 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
PTCD3-218ENST00000493430 FHDC1Q9C0D6 1143 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-218ENST00000493430 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
PTCD3-218ENST00000493430 MX2P20592 715 aa7.38□□□□□ -1.23
PTCD3-218ENST00000493430 SOX11P35716 441 aa7.38□□□□□ -1.23
PTCD3-218ENST00000493430 MCM6Q14566 821 aa7.38□□□□□ -1.23
PTCD3-218ENST00000493430 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-218ENST00000493430 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
PTCD3-218ENST00000493430 GPAMQ9HCL2 828 aa7.38□□□□□ -1.23
PTCD3-218ENST00000493430 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
PTCD3-218ENST00000493430 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
PTCD3-218ENST00000493430 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
PTCD3-218ENST00000493430 CSB-PGBD3P0DP91 1061 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 BCRP11274 1271 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 IRS1P35568 1242 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 C4orf17Q53FE4 359 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
PTCD3-218ENST00000493430 PGBD3Q8N328 593 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
PTCD3-218ENST00000493430 LBRQ14739 615 aaKnown RBP7.35□□□□□ -1.23
PTCD3-218ENST00000493430 TLR1Q15399 786 aa7.35□□□□□ -1.23
PTCD3-218ENST00000493430 KANK3Q6NY19 840 aa7.35□□□□□ -1.23
PTCD3-218ENST00000493430 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
PTCD3-218ENST00000493430 INHAP05111 366 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 MSX1P28360 303 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 GDF10P55107 478 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 ACDQ96AP0 544 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 COG6Q9Y2V7 657 aa7.34□□□□□ -1.23
PTCD3-218ENST00000493430 THBS1P07996 1170 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 MAP2K3P46734 347 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 SCNN1DP51172 638 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 EFHC2Q5JST6 749 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 NEDD1Q8NHV4 660 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 RUBCNLQ9H714 662 aa7.33□□□□□ -1.24
PTCD3-218ENST00000493430 SMTNP53814 917 aa7.31□□□□□ -1.24
PTCD3-218ENST00000493430 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
PTCD3-218ENST00000493430 PODNQ7Z5L7 613 aa7.31□□□□□ -1.24
PTCD3-218ENST00000493430 BEND7Q8N7W2 519 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-218ENST00000493430 OXCT2Q9BYC2 517 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-218ENST00000493430 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
PTCD3-218ENST00000493430 DNMT3AQ9Y6K1 912 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-218ENST00000493430 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 OIP5O43482 229 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 PLA2G4AP47712 749 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
PTCD3-218ENST00000493430 CRISPLD1Q9H336 500 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 ALG2Q9H553 416 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
PTCD3-218ENST00000493430 ATXN7L1Q9ULK2 861 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-218ENST00000493430 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 RAD21O60216 631 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-218ENST00000493430 SKIP12755 728 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 EML3Q32P44 896 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 AIDAQ96BJ3 306 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 SLC4A9Q96Q91 983 aa7.29□□□□□ -1.24
PTCD3-218ENST00000493430 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 CDK2AP1O14519 115 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 FIGNL1Q6PIW4 674 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 NFATC2IPQ8NCF5 419 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-218ENST00000493430 NOD1Q9Y239 953 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
PTCD3-218ENST00000493430 A6NJY4 79 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 BNIP3LO60238 219 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 BMP4P12644 408 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 FOXK2Q01167 660 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 FLIIQ13045 1269 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 NBPF1Q3BBV0 1214 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 ABHD17AQ96GS6 310 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 POM121Q96HA1 1249 aa7.27□□□□□ -1.25
PTCD3-218ENST00000493430 BACH1O14867 736 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 IGHA1P01876 353 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 FGFR3P22607 806 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 MTFR1Q15390 333 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 GPAT2Q6NUI2 795 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 NDFIP2Q9NV92 336 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 PCDHGC4Q9Y5F7 938 aa7.26□□□□□ -1.25
PTCD3-218ENST00000493430 UBTFP17480 764 aaKnown RBP7.25□□□□□ -1.25
PTCD3-218ENST00000493430 ATP4AP20648 1035 aa7.25□□□□□ -1.25
PTCD3-218ENST00000493430 CTBSQ01459 385 aa7.25□□□□□ -1.25
PTCD3-218ENST00000493430 PSME1Q06323 249 aa7.25□□□□□ -1.25
PTCD3-218ENST00000493430 ARSJQ5FYB0 599 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-218ENST00000493430 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
PTCD3-218ENST00000493430 EDARADDQ8WWZ3 215 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms