RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 FGFR3P22607 806 aa9.26□□□□□ -0.93
SYCP1-208ENST00000493377 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
SYCP1-208ENST00000493377 PRRT3Q5FWE3 981 aa9.26□□□□□ -0.93
SYCP1-208ENST00000493377 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
SYCP1-208ENST00000493377 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
SYCP1-208ENST00000493377 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
SYCP1-208ENST00000493377 NEURL1BA8MQ27 555 aa9.25□□□□□ -0.93
SYCP1-208ENST00000493377 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
SYCP1-208ENST00000493377 PTK2Q05397 1052 aa9.25□□□□□ -0.93
SYCP1-208ENST00000493377 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
SYCP1-208ENST00000493377 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
SYCP1-208ENST00000493377 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
SYCP1-208ENST00000493377 GPSM3Q9Y4H4 160 aa9.25□□□□□ -0.93
SYCP1-208ENST00000493377 ELNP15502 786 aa9.24□□□□□ -0.93
SYCP1-208ENST00000493377 ESPNB1AK53 854 aa9.23□□□□□ -0.93
SYCP1-208ENST00000493377 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
SYCP1-208ENST00000493377 NACC1Q96RE7 527 aa9.23□□□□□ -0.93
SYCP1-208ENST00000493377 OCSTAMPQ9BR26 566 aa9.23□□□□□ -0.93
SYCP1-208ENST00000493377 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
SYCP1-208ENST00000493377 CTBSQ01459 385 aa9.22□□□□□ -0.93
SYCP1-208ENST00000493377 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
SYCP1-208ENST00000493377 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
SYCP1-208ENST00000493377 A0A1B0GTH6 734 aa9.21□□□□□ -0.94
SYCP1-208ENST00000493377 TUSC1Q2TAM9 212 aa9.21□□□□□ -0.94
SYCP1-208ENST00000493377 NDFIP2Q9NV92 336 aa9.21□□□□□ -0.94
SYCP1-208ENST00000493377 CLN3Q13286 438 aa9.2□□□□□ -0.94
SYCP1-208ENST00000493377 QPCTQ16769 361 aa9.2□□□□□ -0.94
SYCP1-208ENST00000493377 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
SYCP1-208ENST00000493377 LILRB3O75022 631 aa9.19□□□□□ -0.94
SYCP1-208ENST00000493377 CSB-PGBD3P0DP91 1061 aa9.19□□□□□ -0.94
SYCP1-208ENST00000493377 ADH6P28332 368 aa9.19□□□□□ -0.94
SYCP1-208ENST00000493377 PGBD3Q8N328 593 aa9.19□□□□□ -0.94
SYCP1-208ENST00000493377 EFHC2Q5JST6 749 aa9.18□□□□□ -0.94
SYCP1-208ENST00000493377 AMHR2Q16671 573 aa9.17□□□□□ -0.94
SYCP1-208ENST00000493377 AVENQ9NQS1 362 aaPredicted RBP9.17□□□□□ -0.94
SYCP1-208ENST00000493377 BNIP3LO60238 219 aa9.16□□□□□ -0.94
SYCP1-208ENST00000493377 DZIP3Q86Y13 1208 aaKnown RBP9.16□□□□□ -0.94
SYCP1-208ENST00000493377 KRTAP4-11Q9BYQ6 195 aa9.15□□□□□ -0.94
SYCP1-208ENST00000493377 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
SYCP1-208ENST00000493377 RNF112Q9ULX5 631 aa9.14□□□□□ -0.95
SYCP1-208ENST00000493377 FCHSD1Q86WN1 690 aa9.13□□□□□ -0.95
SYCP1-208ENST00000493377 RUBCNLQ9H714 662 aa9.12□□□□□ -0.95
SYCP1-208ENST00000493377 LIMD1Q9UGP4 676 aa9.12□□□□□ -0.95
SYCP1-208ENST00000493377 IRAK1P51617 712 aa9.11□□□□□ -0.95
SYCP1-208ENST00000493377 CYP2U1Q7Z449 544 aa9.11□□□□□ -0.95
SYCP1-208ENST00000493377 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
SYCP1-208ENST00000493377 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
SYCP1-208ENST00000493377 KLF15Q9UIH9 416 aa9.1□□□□□ -0.95
SYCP1-208ENST00000493377 RNF114Q9Y508 228 aa9.1□□□□□ -0.95
SYCP1-208ENST00000493377 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
SYCP1-208ENST00000493377 FIGNL1Q6PIW4 674 aa9.09□□□□□ -0.95
SYCP1-208ENST00000493377 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
SYCP1-208ENST00000493377 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
SYCP1-208ENST00000493377 KRTAP4-5Q9BYR2 181 aa9.08□□□□□ -0.96
SYCP1-208ENST00000493377 C9orf172C9J069 976 aa9.07□□□□□ -0.96
SYCP1-208ENST00000493377 PHKA2P46019 1235 aa9.07□□□□□ -0.96
SYCP1-208ENST00000493377 TRIM28Q13263 835 aaKnown RBP9.07□□□□□ -0.96
SYCP1-208ENST00000493377 FAM182BQ5T319 152 aa9.07□□□□□ -0.96
SYCP1-208ENST00000493377 CRISPLD1Q9H336 500 aa9.07□□□□□ -0.96
SYCP1-208ENST00000493377 MSX1P28360 303 aa9.06□□□□□ -0.96
SYCP1-208ENST00000493377 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
SYCP1-208ENST00000493377 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
SYCP1-208ENST00000493377 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
SYCP1-208ENST00000493377 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
SYCP1-208ENST00000493377 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
SYCP1-208ENST00000493377 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
SYCP1-208ENST00000493377 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
SYCP1-208ENST00000493377 PCDHGC4Q9Y5F7 938 aa9.04□□□□□ -0.96
SYCP1-208ENST00000493377 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
SYCP1-208ENST00000493377 JAG1P78504 1218 aa9.03□□□□□ -0.96
SYCP1-208ENST00000493377 MBTPS1Q14703 1052 aa9.03□□□□□ -0.96
SYCP1-208ENST00000493377 NR6A1Q15406 480 aa9.03□□□□□ -0.96
SYCP1-208ENST00000493377 GRIK4Q16099 956 aa9.03□□□□□ -0.96
SYCP1-208ENST00000493377 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
SYCP1-208ENST00000493377 PNMA1Q8ND90 353 aa9.02□□□□□ -0.97
SYCP1-208ENST00000493377 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
SYCP1-208ENST00000493377 TP53INP1Q96A56 240 aa9.02□□□□□ -0.97
SYCP1-208ENST00000493377 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ELOA3DA6NLF2 546 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ALAS2P22557 587 aa9.01□□□□□ -0.97
SYCP1-208ENST00000493377 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ELOA3BQ3SY89 546 aa9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ZNF468Q5VIY5 522 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ELOA3Q8NG57 546 aa9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-208ENST00000493377 PRDM6Q9NQX0 595 aa9.01□□□□□ -0.97
SYCP1-208ENST00000493377 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
SYCP1-208ENST00000493377 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
SYCP1-208ENST00000493377 CENPCQ03188 943 aa8.99□□□□□ -0.97
SYCP1-208ENST00000493377 ZCCHC2Q9C0B9 1178 aaKnown RBP8.99□□□□□ -0.97
SYCP1-208ENST00000493377 PCBP4P57723 403 aaKnown RBP8.98□□□□□ -0.97
SYCP1-208ENST00000493377 NRG1Q02297 640 aaPredicted RBP8.98□□□□□ -0.97
SYCP1-208ENST00000493377 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
SYCP1-208ENST00000493377 C4orf17Q53FE4 359 aa8.98□□□□□ -0.97
SYCP1-208ENST00000493377 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
SYCP1-208ENST00000493377 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
SYCP1-208ENST00000493377 TRAK2O60296 914 aa8.97□□□□□ -0.97
SYCP1-208ENST00000493377 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
SYCP1-208ENST00000493377 ATXN7O15265 892 aaPredicted RBP8.96□□□□□ -0.98
SYCP1-208ENST00000493377 GNRH1P01148 92 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms