RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PHKG2P15735 406 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 ITPK1Q13572 414 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 EYA1Q99502 592 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
SND1-215ENST00000492772 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
SND1-215ENST00000492772 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
SND1-215ENST00000492772 MMP10P09238 476 aa15.24■□□□□ 0.03
SND1-215ENST00000492772 BRCA1P38398 1863 aaKnown RBP15.23■□□□□ 0.03
SND1-215ENST00000492772 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
SND1-215ENST00000492772 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
SND1-215ENST00000492772 KIF3CO14782 793 aa15.22■□□□□ 0.03
SND1-215ENST00000492772 ADRA2BP18089 450 aa15.22■□□□□ 0.03
SND1-215ENST00000492772 TGFB2P61812 414 aa15.22■□□□□ 0.03
SND1-215ENST00000492772 NLGN1Q8N2Q7 840 aa15.22■□□□□ 0.03
SND1-215ENST00000492772 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
SND1-215ENST00000492772 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
SND1-215ENST00000492772 ARFGEF1Q9Y6D6 1849 aa15.21■□□□□ 0.03
SND1-215ENST00000492772 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
SND1-215ENST00000492772 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
SND1-215ENST00000492772 HSP90AB1P08238 724 aaKnown RBP15.2■□□□□ 0.02
SND1-215ENST00000492772 EIF4A2Q14240 407 aaKnown RBP15.2■□□□□ 0.02
SND1-215ENST00000492772 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
SND1-215ENST00000492772 APLP1P51693 650 aa15.19■□□□□ 0.02
SND1-215ENST00000492772 DCAF5Q96JK2 942 aa15.19■□□□□ 0.02
SND1-215ENST00000492772 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
SND1-215ENST00000492772 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
SND1-215ENST00000492772 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
SND1-215ENST00000492772 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
SND1-215ENST00000492772 TOMM70O94826 608 aa15.17■□□□□ 0.02
SND1-215ENST00000492772 RFC4P35249 363 aa15.17■□□□□ 0.02
SND1-215ENST00000492772 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
SND1-215ENST00000492772 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
SND1-215ENST00000492772 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
SND1-215ENST00000492772 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
SND1-215ENST00000492772 A0A0G2JLW4 131 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 GYS1P13807 737 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
SND1-215ENST00000492772 TJP1Q07157 1748 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
SND1-215ENST00000492772 FCHSD2O94868 740 aa15.15■□□□□ 0.02
SND1-215ENST00000492772 DPEP1P16444 411 aa15.15■□□□□ 0.02
SND1-215ENST00000492772 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
SND1-215ENST00000492772 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
SND1-215ENST00000492772 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
SND1-215ENST00000492772 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
SND1-215ENST00000492772 CABP4P57796 275 aa15.14■□□□□ 0.01
SND1-215ENST00000492772 SCN11AQ9UI33 1791 aa15.13■□□□□ 0.01
SND1-215ENST00000492772 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
SND1-215ENST00000492772 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
SND1-215ENST00000492772 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
SND1-215ENST00000492772 NMRK2Q9NPI5 230 aa15.12■□□□□ 0.01
SND1-215ENST00000492772 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
SND1-215ENST00000492772 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
SND1-215ENST00000492772 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
SND1-215ENST00000492772 ADAMTS7Q9UKP4 1686 aa15.11■□□□□ 0.01
SND1-215ENST00000492772 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
SND1-215ENST00000492772 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
SND1-215ENST00000492772 MTHFSP49914 203 aa15.1■□□□□ 0.01
SND1-215ENST00000492772 C9orf131Q5VYM1 1079 aa15.1■□□□□ 0.01
SND1-215ENST00000492772 C16orf71Q8IYS4 520 aaPredicted RBP15.1■□□□□ 0.01
SND1-215ENST00000492772 KCNA3P22001 575 aa15.09■□□□□ 0.01
SND1-215ENST00000492772 DALRD3Q5D0E6 543 aaKnown RBP15.09■□□□□ 0.01
SND1-215ENST00000492772 KDM2BQ8NHM5 1336 aa15.09■□□□□ 0.01
SND1-215ENST00000492772 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0.01
SND1-215ENST00000492772 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
SND1-215ENST00000492772 DNAJC5GQ8N7S2 189 aa15.08■□□□□ 0
SND1-215ENST00000492772 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
SND1-215ENST00000492772 DLEC1Q9Y238 1755 aa15.08■□□□□ 0
SND1-215ENST00000492772 SBF1O95248 1867 aa15.08■□□□□ 0
SND1-215ENST00000492772 MRC1P22897 1456 aa15.08■□□□□ 0
SND1-215ENST00000492772 DDR1Q08345 913 aa15.07■□□□□ 0
SND1-215ENST00000492772 FSTL1Q12841 308 aa15.07■□□□□ 0
SND1-215ENST00000492772 FKBP8Q14318 412 aa15.07■□□□□ 0
SND1-215ENST00000492772 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
SND1-215ENST00000492772 NFATC2IPQ8NCF5 419 aa15.07■□□□□ 0
SND1-215ENST00000492772 VIRMAQ69YN4 1812 aaKnown RBP15.07■□□□□ 0
SND1-215ENST00000492772 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
SND1-215ENST00000492772 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
SND1-215ENST00000492772 PANK3Q9H999 370 aa15.06■□□□□ 0
SND1-215ENST00000492772 RNF181Q9P0P0 153 aa15.06■□□□□ 0
SND1-215ENST00000492772 AFDNP55196 1824 aaKnown RBP15.06■□□□□ 0
SND1-215ENST00000492772 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
SND1-215ENST00000492772 SULT6B1Q6IMI4 303 aa15.05■□□□□ -0
SND1-215ENST00000492772 MORC1Q86VD1 984 aa15.05■□□□□ -0
SND1-215ENST00000492772 ZC3H4Q9UPT8 1303 aaKnown RBP15.05■□□□□ -0
SND1-215ENST00000492772 TIAM2Q8IVF5 1701 aa15.04■□□□□ -0
SND1-215ENST00000492772 ZPR1O75312 459 aa15.04■□□□□ -0
SND1-215ENST00000492772 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
SND1-215ENST00000492772 INTS5Q6P9B9 1019 aaKnown RBP15.04■□□□□ -0
SND1-215ENST00000492772 SOS1Q07889 1333 aaPredicted RBP15.03■□□□□ -0
SND1-215ENST00000492772 TM4SF1P30408 202 aa15.03■□□□□ -0
SND1-215ENST00000492772 CHRNA5P30532 468 aa15.03■□□□□ -0
SND1-215ENST00000492772 AKAP4Q5JQC9 854 aa15.03■□□□□ -0
SND1-215ENST00000492772 KLRG1Q96E93 195 aa15.03■□□□□ -0
SND1-215ENST00000492772 COL15A1P39059 1388 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms