RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
CSMD3-206ENST00000492692 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
CSMD3-206ENST00000492692 A1CFQ9NQ94 594 aaKnown RBP13.25□□□□□ -0.29
CSMD3-206ENST00000492692 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
CSMD3-206ENST00000492692 PTPRCP08575 1304 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 TPM1P09493 284 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 KLHL23Q8NBE8 558 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 FAXDC2Q96IV6 333 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
CSMD3-206ENST00000492692 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
CSMD3-206ENST00000492692 PAX7P23759 505 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 CD151P48509 253 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 TRAF1Q13077 416 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSMD3-206ENST00000492692 FMNL3Q8IVF7 1028 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 SMC2O95347 1197 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 TMF1P82094 1093 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 MSL3Q8N5Y2 521 aaKnown RBP13.23□□□□□ -0.29
CSMD3-206ENST00000492692 TESK2Q96S53 571 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
CSMD3-206ENST00000492692 DISP1Q96F81 1524 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 ARHGEF5Q12774 1597 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 CCDC141Q6ZP82 1450 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 ATP8B1O43520 1251 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 RPS6KA5O75582 802 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 MBD3O95983 291 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 USP8P40818 1118 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 DNAJC14Q6Y2X3 702 aaPredicted RBP13.22□□□□□ -0.29
CSMD3-206ENST00000492692 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
CSMD3-206ENST00000492692 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
CSMD3-206ENST00000492692 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.29
CSMD3-206ENST00000492692 SSFA2P28290 1259 aa13.21□□□□□ -0.29
CSMD3-206ENST00000492692 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
CSMD3-206ENST00000492692 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
CSMD3-206ENST00000492692 NEK11Q8NG66 645 aa13.21□□□□□ -0.29
CSMD3-206ENST00000492692 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
CSMD3-206ENST00000492692 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.3
CSMD3-206ENST00000492692 SYNMO15061 1565 aa13.21□□□□□ -0.3
CSMD3-206ENST00000492692 IGHDP01880 384 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 ICA1Q05084 483 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 E2F4Q16254 413 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 MIEF2Q96C03 454 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 AK7Q96M32 723 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
CSMD3-206ENST00000492692 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
CSMD3-206ENST00000492692 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
CSMD3-206ENST00000492692 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
CSMD3-206ENST00000492692 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
CSMD3-206ENST00000492692 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
CSMD3-206ENST00000492692 MAGEA8P43361 318 aa13.19□□□□□ -0.3
CSMD3-206ENST00000492692 CORO7P57737 925 aa13.19□□□□□ -0.3
CSMD3-206ENST00000492692 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
CSMD3-206ENST00000492692 ERO1AQ96HE7 468 aa13.19□□□□□ -0.3
CSMD3-206ENST00000492692 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
CSMD3-206ENST00000492692 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
CSMD3-206ENST00000492692 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSMD3-206ENST00000492692 RWDD2BP57060 319 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 SH3GL3Q99963 347 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
CSMD3-206ENST00000492692 ST7Q9NRC1 585 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 CCP110O43303 1012 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
CSMD3-206ENST00000492692 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
CSMD3-206ENST00000492692 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
CSMD3-206ENST00000492692 GRIK3Q13003 919 aa13.17□□□□□ -0.3
CSMD3-206ENST00000492692 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
CSMD3-206ENST00000492692 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
CSMD3-206ENST00000492692 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
CSMD3-206ENST00000492692 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
CSMD3-206ENST00000492692 A2MP01023 1474 aa13.17□□□□□ -0.3
CSMD3-206ENST00000492692 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
CSMD3-206ENST00000492692 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
CSMD3-206ENST00000492692 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
CSMD3-206ENST00000492692 PPFIA2O75334 1257 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 SYAP1Q96A49 352 aaPredicted RBP13.16□□□□□ -0.3
CSMD3-206ENST00000492692 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 UNC13BO14795 1591 aa13.16□□□□□ -0.3
CSMD3-206ENST00000492692 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms