RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TULP4Q9NRJ4 1543 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 RICTORQ6R327 1708 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 SIGLEC1Q9BZZ2 1709 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 IQSEC2Q5JU85 1478 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CCDC194A0A1B0GVG4 234 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 GRXCR2A6NFK2 248 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CREB3O43889 395 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 FCHSD2O94868 740 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 RECKO95980 971 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CLCN1P35523 988 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 ANP32AP39687 249 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CLK2P49760 499 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 OS9Q13438 667 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 LONRF3Q496Y0 759 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CENPQQ7L2Z9 268 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 MORC1Q86VD1 984 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 NPAS4Q8IUM7 802 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CCDC146Q8IYE0 955 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 NME8Q8N427 588 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 ADAMTS19Q8TE59 1207 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 KCNB2Q92953 911 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 IPO9Q96P70 1041 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 SPOCK3Q9BQ16 436 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 BACH2Q9BYV9 841 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CUEDC1Q9NWM3 386 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 CHPF2Q9P2E5 772 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 BIN2Q9UBW5 565 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 PHF8Q9UPP1 1060 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 NOP58Q9Y2X3 529 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 REREQ9P2R6 1566 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 ATAD2Q6PL18 1390 aa4.78□□□□□ -1.64
ATPAF1-206ENST00000492233 AGLP35573 1532 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 QRICH2Q9H0J4 1663 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 MED14O60244 1454 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 EIF3JO75822 258 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 ARID4AP29374 1257 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 PSME1Q06323 249 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 PDE3AQ14432 1141 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 CCDC144BQ3MJ40 725 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 C20orf194Q5TEA3 1177 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 MYSM1Q5VVJ2 828 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 WDR63Q8IWG1 891 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 DHX38Q92620 1227 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 PMM1Q92871 262 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 RUNDC1Q96C34 613 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 EVI5LQ96CN4 794 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 CFAP53Q96M91 514 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 TFIP11Q9UBB9 837 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 PNMA2Q9UL42 364 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 FAN1Q9Y2M0 1017 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 ABCC11Q96J66 1382 aa4.77□□□□□ -1.65
ATPAF1-206ENST00000492233 PTPRMP28827 1452 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 SOWAHDA6NJG2 315 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 GTF2F1P35269 517 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 MTHFSP49914 203 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 MDM2Q00987 491 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 FOXD4Q12950 439 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 PDIA6Q15084 440 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 ZFYVE27Q5T4F4 411 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 C9orf131Q5VYM1 1079 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 ARHGEF28Q8N1W1 1705 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 PIK3R5Q8WYR1 880 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 YTHDC2Q9H6S0 1430 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 GPCPD1Q9NPB8 672 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 SHPRHQ149N8 1683 aa4.76□□□□□ -1.65
ATPAF1-206ENST00000492233 TMEM131LA2VDJ0 1609 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 PPFIA4O75335 1185 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 PAK3O75914 559 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 NEFMP07197 916 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 ATP2B1P20020 1258 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 PAX3P23760 479 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 PSEN1P49768 467 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 TAGLNQ01995 201 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 EVX2Q03828 476 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 FAM43BQ6ZT52 329 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 CCAR1Q8IX12 1150 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 EFCAB3Q8N7B9 438 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 TMUB1Q9BVT8 246 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 CABP2Q9NPB3 220 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 GABBR1Q9UBS5 961 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 PRKAG2Q9UGJ0 569 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 DLC1Q96QB1 1528 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 A0A1W2PP64 1363 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 COL3A1P02461 1466 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 NLRP1Q9C000 1473 aa4.75□□□□□ -1.65
ATPAF1-206ENST00000492233 SPATA31D1Q6ZQQ2 1576 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 PREX1Q8TCU6 1659 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 ARHGEF40Q8TER5 1519 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 U2SURPO15042 1029 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 BCAR3O75815 825 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 PTMAP06454 111 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 CT47B1P0C2W7 299 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 RARSP54136 660 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 FAM69CQ0P6D2 419 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 WASHC4Q2M389 1173 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 PPP1R15BQ5SWA1 713 aa4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 NUTM2DQ5VT03 806 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 FBXO31Q5XUX0 539 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-206ENST00000492233 KRBA2Q6ZNG9 492 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms