RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 SSFA2P28290 1259 aa11.29□□□□□ -0.6
APP-216ENST00000491395 CABP4P57796 275 aa11.29□□□□□ -0.6
APP-216ENST00000491395 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
APP-216ENST00000491395 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
APP-216ENST00000491395 MTHFSP49914 203 aa11.28□□□□□ -0.6
APP-216ENST00000491395 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
APP-216ENST00000491395 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
APP-216ENST00000491395 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
APP-216ENST00000491395 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
APP-216ENST00000491395 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
APP-216ENST00000491395 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
APP-216ENST00000491395 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
APP-216ENST00000491395 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.61
APP-216ENST00000491395 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
APP-216ENST00000491395 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
APP-216ENST00000491395 HMOX1P09601 288 aa11.26□□□□□ -0.61
APP-216ENST00000491395 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
APP-216ENST00000491395 C5P01031 1676 aa11.25□□□□□ -0.61
APP-216ENST00000491395 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
APP-216ENST00000491395 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
APP-216ENST00000491395 C4BP0C0L5 1744 aa11.25□□□□□ -0.61
APP-216ENST00000491395 COL24A1Q17RW2 1714 aa11.25□□□□□ -0.61
APP-216ENST00000491395 ITGB4P16144 1822 aa11.25□□□□□ -0.61
APP-216ENST00000491395 KDRP35968 1356 aa11.25□□□□□ -0.61
APP-216ENST00000491395 RC3H1Q5TC82 1133 aaKnown RBP11.24□□□□□ -0.61
APP-216ENST00000491395 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
APP-216ENST00000491395 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
APP-216ENST00000491395 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
APP-216ENST00000491395 UTRNP46939 3433 aa11.23□□□□□ -0.61
APP-216ENST00000491395 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
APP-216ENST00000491395 RPS6KA4O75676 772 aa11.23□□□□□ -0.61
APP-216ENST00000491395 MMP10P09238 476 aa11.23□□□□□ -0.61
APP-216ENST00000491395 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
APP-216ENST00000491395 MTHFSDQ2M296 383 aaKnown RBP11.22□□□□□ -0.61
APP-216ENST00000491395 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
APP-216ENST00000491395 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.61
APP-216ENST00000491395 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
APP-216ENST00000491395 GYS1P13807 737 aa11.21□□□□□ -0.61
APP-216ENST00000491395 RFC4P35249 363 aa11.21□□□□□ -0.61
APP-216ENST00000491395 CRKLP46109 303 aaKnown RBP11.21□□□□□ -0.61
APP-216ENST00000491395 NLGN1Q8N2Q7 840 aa11.21□□□□□ -0.61
APP-216ENST00000491395 SLC52A2Q9HAB3 445 aa11.21□□□□□ -0.61
APP-216ENST00000491395 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
APP-216ENST00000491395 ADRA2BP18089 450 aa11.2□□□□□ -0.62
APP-216ENST00000491395 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
APP-216ENST00000491395 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
APP-216ENST00000491395 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
APP-216ENST00000491395 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
APP-216ENST00000491395 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
APP-216ENST00000491395 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
APP-216ENST00000491395 A0A0G2JLW4 131 aa11.18□□□□□ -0.62
APP-216ENST00000491395 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
APP-216ENST00000491395 FKBP8Q14318 412 aa11.17□□□□□ -0.62
APP-216ENST00000491395 CCDC87Q9NVE4 849 aa11.17□□□□□ -0.62
APP-216ENST00000491395 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
APP-216ENST00000491395 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
APP-216ENST00000491395 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
APP-216ENST00000491395 DPEP1P16444 411 aa11.16□□□□□ -0.62
APP-216ENST00000491395 TGFB2P61812 414 aa11.16□□□□□ -0.62
APP-216ENST00000491395 IL17REQ8NFR9 667 aa11.16□□□□□ -0.62
APP-216ENST00000491395 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
APP-216ENST00000491395 COL3A1P02461 1466 aaPredicted RBP11.15□□□□□ -0.62
APP-216ENST00000491395 DDR1Q08345 913 aa11.15□□□□□ -0.62
APP-216ENST00000491395 PHACTR3Q96KR7 559 aa11.15□□□□□ -0.62
APP-216ENST00000491395 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
APP-216ENST00000491395 CHD4Q14839 1912 aa11.14□□□□□ -0.63
APP-216ENST00000491395 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
APP-216ENST00000491395 USPL1Q5W0Q7 1092 aa11.14□□□□□ -0.63
APP-216ENST00000491395 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
APP-216ENST00000491395 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
APP-216ENST00000491395 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
APP-216ENST00000491395 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
APP-216ENST00000491395 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
APP-216ENST00000491395 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
APP-216ENST00000491395 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
APP-216ENST00000491395 GNAT3A8MTJ3 354 aa11.13□□□□□ -0.63
APP-216ENST00000491395 ZPR1O75312 459 aa11.13□□□□□ -0.63
APP-216ENST00000491395 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
APP-216ENST00000491395 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
APP-216ENST00000491395 TM4SF1P30408 202 aa11.13□□□□□ -0.63
APP-216ENST00000491395 PRKAR2BP31323 418 aa11.13□□□□□ -0.63
APP-216ENST00000491395 TEFQ10587 303 aa11.13□□□□□ -0.63
APP-216ENST00000491395 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
APP-216ENST00000491395 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
APP-216ENST00000491395 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
APP-216ENST00000491395 POLRMTO00411 1230 aaKnown RBP11.12□□□□□ -0.63
APP-216ENST00000491395 FCHSD2O94868 740 aa11.12□□□□□ -0.63
APP-216ENST00000491395 KCNA3P22001 575 aa11.12□□□□□ -0.63
APP-216ENST00000491395 ARHGAP27Q6ZUM4 889 aa11.12□□□□□ -0.63
APP-216ENST00000491395 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
APP-216ENST00000491395 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
APP-216ENST00000491395 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
APP-216ENST00000491395 RSPH6AQ9H0K4 717 aa11.12□□□□□ -0.63
APP-216ENST00000491395 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
APP-216ENST00000491395 NARFQ9UHQ1 456 aa11.12□□□□□ -0.63
APP-216ENST00000491395 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
APP-216ENST00000491395 MRC1P22897 1456 aa11.12□□□□□ -0.63
APP-216ENST00000491395 ZNF831Q5JPB2 1677 aa11.11□□□□□ -0.63
APP-216ENST00000491395 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
APP-216ENST00000491395 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms