RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 TMF1P82094 1093 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
CMSS1-206ENST00000491299 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
CMSS1-206ENST00000491299 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-206ENST00000491299 PDIA6Q15084 440 aa11.97□□□□□ -0.49
CMSS1-206ENST00000491299 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
CMSS1-206ENST00000491299 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
CMSS1-206ENST00000491299 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
CMSS1-206ENST00000491299 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
CMSS1-206ENST00000491299 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.96□□□□□ -0.497e-7■■■■□ 21.3
CMSS1-206ENST00000491299 DDX12PQ92771 950 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
CMSS1-206ENST00000491299 LMO7Q8WWI1 1683 aa11.96□□□□□ -0.5
CMSS1-206ENST00000491299 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
CMSS1-206ENST00000491299 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-206ENST00000491299 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
CMSS1-206ENST00000491299 TESK2Q96S53 571 aa11.95□□□□□ -0.5
CMSS1-206ENST00000491299 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
CMSS1-206ENST00000491299 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
CMSS1-206ENST00000491299 EP400Q96L91 3159 aa11.95□□□□□ -0.5
CMSS1-206ENST00000491299 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
CMSS1-206ENST00000491299 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
CMSS1-206ENST00000491299 PHF14O94880 888 aa11.94□□□□□ -0.5
CMSS1-206ENST00000491299 PTPREP23469 700 aa11.94□□□□□ -0.5
CMSS1-206ENST00000491299 CD163L1Q9NR16 1453 aa11.94□□□□□ -0.5
CMSS1-206ENST00000491299 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
CMSS1-206ENST00000491299 AATKQ6ZMQ8 1374 aa11.93□□□□□ -0.5
CMSS1-206ENST00000491299 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
CMSS1-206ENST00000491299 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
CMSS1-206ENST00000491299 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
CMSS1-206ENST00000491299 USP54Q70EL1 1684 aa11.93□□□□□ -0.5
CMSS1-206ENST00000491299 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
CMSS1-206ENST00000491299 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
CMSS1-206ENST00000491299 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
CMSS1-206ENST00000491299 ARIH1Q9Y4X5 557 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-206ENST00000491299 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-206ENST00000491299 LTN1O94822 1766 aa11.92□□□□□ -0.5
CMSS1-206ENST00000491299 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
CMSS1-206ENST00000491299 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 NME9Q86XW9 330 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 TCP11L2Q8N4U5 519 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
CMSS1-206ENST00000491299 RGPD5Q99666 1765 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 CRB1P82279 1406 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 USP31Q70CQ4 1352 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 ANKRD36BQ8N2N9 1353 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 ABCC6O95255 1503 aa11.91□□□□□ -0.5
CMSS1-206ENST00000491299 SRCAPQ6ZRS2 3230 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 CSB-PGBD3P0DP91 1061 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 NBR1Q14596 966 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 NFAT5O94916 1531 aa11.9□□□□□ -0.5
CMSS1-206ENST00000491299 COL18A1P39060 1754 aa11.9□□□□□ -0.51
CMSS1-206ENST00000491299 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
CMSS1-206ENST00000491299 PTGER2P43116 358 aa11.89□□□□□ -0.51
CMSS1-206ENST00000491299 PDE3BQ13370 1112 aa11.89□□□□□ -0.51
CMSS1-206ENST00000491299 COG3Q96JB2 828 aa11.89□□□□□ -0.51
CMSS1-206ENST00000491299 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
CMSS1-206ENST00000491299 EIF4G2P78344 907 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■■■ 40.1
CMSS1-206ENST00000491299 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
CMSS1-206ENST00000491299 EPAS1Q99814 870 aa11.88□□□□□ -0.51
CMSS1-206ENST00000491299 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
CMSS1-206ENST00000491299 KIF20BQ96Q89 1820 aa11.88□□□□□ -0.51
CMSS1-206ENST00000491299 TK2O00142 265 aa11.87□□□□□ -0.51
CMSS1-206ENST00000491299 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
CMSS1-206ENST00000491299 WNK3Q9BYP7 1800 aa11.87□□□□□ -0.51
CMSS1-206ENST00000491299 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
CMSS1-206ENST00000491299 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
CMSS1-206ENST00000491299 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
CMSS1-206ENST00000491299 BAG6P46379 1132 aa11.86□□□□□ -0.51
CMSS1-206ENST00000491299 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
CMSS1-206ENST00000491299 MYOM1P52179 1685 aa11.85□□□□□ -0.51
CMSS1-206ENST00000491299 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
CMSS1-206ENST00000491299 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
CMSS1-206ENST00000491299 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
CMSS1-206ENST00000491299 DDB1Q16531 1140 aa11.84□□□□□ -0.51
CMSS1-206ENST00000491299 FAM182BQ5T319 152 aa11.84□□□□□ -0.51
CMSS1-206ENST00000491299 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
CMSS1-206ENST00000491299 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
CMSS1-206ENST00000491299 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
CMSS1-206ENST00000491299 PPP1R3GB7ZBB8 358 aa11.83□□□□□ -0.52
CMSS1-206ENST00000491299 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
CMSS1-206ENST00000491299 VPS9D1Q9Y2B5 631 aa11.83□□□□□ -0.52
CMSS1-206ENST00000491299 MAP3K7O43318 606 aa11.82□□□□□ -0.52
CMSS1-206ENST00000491299 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
CMSS1-206ENST00000491299 COL9A1P20849 921 aa11.82□□□□□ -0.52
CMSS1-206ENST00000491299 AMPHP49418 695 aa11.82□□□□□ -0.52
CMSS1-206ENST00000491299 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-206ENST00000491299 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
CMSS1-206ENST00000491299 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
CMSS1-206ENST00000491299 NLRP2Q9NX02 1062 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms