RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GRIP2Q9C0E4 1043 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 RUBCNLQ9H714 662 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 CABP1Q9NZU7 370 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 ZNF232Q9UNY5 417 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 ADAMTS8Q9UP79 889 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 PHF24Q9UPV7 400 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 NOD1Q9Y239 953 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 SOCS7O14512 581 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 PLA2G4AP47712 749 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 GDF10P55107 478 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 IRF5Q13568 498 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 RNFT1Q5M7Z0 435 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 TBC1D9Q6ZT07 1266 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 PODNQ7Z5L7 613 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 XAGE2Q96GT9 111 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 GMCL1Q96IK5 515 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 CUEDC1Q9NWM3 386 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 COG6Q9Y2V7 657 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 CHMP3Q9Y3E7 222 aa3.63□□□□□ -1.83
SNRNP40-207ENST00000491106 SENP3-EIF4A1A0A087X0R7 540 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 A0A1B0GTH6 734 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 BACH1O14867 736 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 TRAK2O60296 914 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 GDF11O95390 407 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 IL2RAP01589 272 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 VSIG8P0DPA2 414 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 TATP17735 454 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 IRS1P35568 1242 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 MCM6Q14566 821 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 NBPF1Q3BBV0 1214 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 TMEM151AQ8N4L1 468 aa3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 SCARF2Q96GP6 870 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 NIFKQ9BYG3 293 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-207ENST00000491106 RNF225M0QZC1 329 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 INHAP05111 366 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 BMP4P12644 408 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 MSX1P28360 303 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 SRSF11Q05519 484 aaKnown RBP3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 C4orf17Q53FE4 359 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 WDR44Q5JSH3 913 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 LYPD4Q6UWN0 246 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 BEND7Q8N7W2 519 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 RHBDD1Q8TEB9 315 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 WHAMMQ8TF30 809 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 ZNF837Q96EG3 531 aaPredicted RBP3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 POM121Q96HA1 1249 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 HINFPQ9BQA5 517 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 ETNK1Q9HBU6 452 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 MBIPQ9NS73 344 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 PRR12Q9ULL5 1215 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 PARP3Q9Y6F1 533 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 IGF1RP08069 1367 aa3.61□□□□□ -1.83
SNRNP40-207ENST00000491106 SPATA31C2B4DYI2 1134 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 PIK3CDO00329 1044 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 KHNYNO15037 678 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 SMTNP53814 917 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 GTF2IP78347 998 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 KRT76Q01546 638 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 NCOA4Q13772 614 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 TMEM132AQ24JP5 1023 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 ZNF385CQ66K41 422 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 TRIM50Q86XT4 487 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 PHTF2Q8N3S3 785 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 GALNT6Q8NCL4 622 aa3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 CHMP7Q8WUX9 453 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 CALR3Q96L12 384 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-207ENST00000491106 A6NJY4 79 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 PHF20L1A8MW92 1017 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 LZTS3O60299 673 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 CELA2BP08218 269 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 BCRP11274 1271 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 MAP2K3P46734 347 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 ATP1A2P50993 1020 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 RASSF7Q02833 373 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 TBCELQ5QJ74 424 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 FIGNL1Q6PIW4 674 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 LARP1Q6PKG0 1096 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 PPARGC1BQ86YN6 1023 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 KCTD17Q8N5Z5 321 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 CLUAP1Q96AJ1 413 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 ABHD17AQ96GS6 310 aa3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 DNMT3AQ9Y6K1 912 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-207ENST00000491106 A0A1W2PNR3 127 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 POM121CA8CG34 1229 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 ATXN7O15265 892 aaPredicted RBP3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 RASA1P20936 1047 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 CCDC102BQ68D86 513 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 GPAT2Q6NUI2 795 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 TNS4Q8IZW8 715 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 TPCN2Q8NHX9 752 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 ZNF594Q96JF6 807 aaPredicted RBP3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 CFHR5Q9BXR6 569 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 OXCT2Q9BYC2 517 aaPredicted RBP3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 IGFLR1Q9H665 355 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 DNAAF2Q9NVR5 837 aaKnown RBP3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 MKRN1Q9UHC7 482 aaKnown RBP3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 HCN4Q9Y3Q4 1203 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 CNTNAP5Q8WYK1 1306 aa3.58□□□□□ -1.84
SNRNP40-207ENST00000491106 DCDC2BA2VCK2 349 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms