RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 BRICD5Q6PL45 260 aa6.88□□□□□ -1.31
EPCAM-206ENST00000490733 GIGYF2Q6Y7W6 1299 aaKnown RBP6.88□□□□□ -1.31
EPCAM-206ENST00000490733 FAM160A2Q8N612 972 aaPredicted RBP6.88□□□□□ -1.31
EPCAM-206ENST00000490733 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
EPCAM-206ENST00000490733 AK7Q96M32 723 aa6.88□□□□□ -1.31
EPCAM-206ENST00000490733 HIRIP3Q9BW71 556 aaPredicted RBP6.88□□□□□ -1.31
EPCAM-206ENST00000490733 C14orf93Q9H972 538 aaKnown RBP6.88□□□□□ -1.31
EPCAM-206ENST00000490733 SLC24A3Q9HC58 644 aa6.88□□□□□ -1.31
EPCAM-206ENST00000490733 SALL2Q9Y467 1007 aaPredicted RBP6.88□□□□□ -1.31
EPCAM-206ENST00000490733 USP47Q96K76 1375 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 HSPA5P11021 654 aaKnown RBP6.87□□□□□ -1.31
EPCAM-206ENST00000490733 USP46P62068 366 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 GUCA2AQ02747 115 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 CARD11Q9BXL7 1154 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 PRDM9Q9NQV7 894 aa6.87□□□□□ -1.31
EPCAM-206ENST00000490733 POLR1AO95602 1720 aaPredicted RBP6.87□□□□□ -1.31
EPCAM-206ENST00000490733 ARHGEF28Q8N1W1 1705 aaKnown RBP6.87□□□□□ -1.31
EPCAM-206ENST00000490733 MED14O60244 1454 aa6.86□□□□□ -1.31
EPCAM-206ENST00000490733 ADAMTS13Q76LX8 1427 aa6.86□□□□□ -1.31
EPCAM-206ENST00000490733 TMEM132EQ6IEE7 984 aa6.86□□□□□ -1.31
EPCAM-206ENST00000490733 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
EPCAM-206ENST00000490733 LMTK3Q96Q04 1460 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 SCAF11Q99590 1463 aaKnown RBP6.85□□□□□ -1.31
EPCAM-206ENST00000490733 PLEKHG1Q9ULL1 1385 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 C11orf95C9JLR9 678 aaPredicted RBP6.85□□□□□ -1.31
EPCAM-206ENST00000490733 SLC19A1P41440 591 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 EIF4G2P78344 907 aaKnown RBP eCLIP6.85□□□□□ -1.31
EPCAM-206ENST00000490733 LIAT1Q6ZQX7 453 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 TXNDC2Q86VQ3 553 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 NUTM1Q86Y26 1132 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.85□□□□□ -1.31
EPCAM-206ENST00000490733 STRCQ7RTU9 1775 aa6.85□□□□□ -1.31
EPCAM-206ENST00000490733 METP08581 1390 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 MS4A1P11836 297 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 Q3C1V9 767 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 MSS51Q4VC12 460 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 SPIRE2Q8WWL2 714 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 KNDC1Q76NI1 1749 aa6.84□□□□□ -1.31
EPCAM-206ENST00000490733 QRICH2Q9H0J4 1663 aa6.84□□□□□ -1.32
EPCAM-206ENST00000490733 PDE4DQ08499 809 aa6.83□□□□□ -1.32
EPCAM-206ENST00000490733 SPRYD7Q5W111 196 aa6.83□□□□□ -1.32
EPCAM-206ENST00000490733 TESK2Q96S53 571 aa6.83□□□□□ -1.32
EPCAM-206ENST00000490733 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
EPCAM-206ENST00000490733 FCF1Q9Y324 198 aaKnown RBP6.83□□□□□ -1.32
EPCAM-206ENST00000490733 PTPRUQ92729 1446 aa6.83□□□□□ -1.32
EPCAM-206ENST00000490733 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
EPCAM-206ENST00000490733 CHD2O14647 1828 aaKnown RBP6.83□□□□□ -1.32
EPCAM-206ENST00000490733 DIP2AQ14689 1571 aa6.82□□□□□ -1.32
EPCAM-206ENST00000490733 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
EPCAM-206ENST00000490733 NFX1Q12986 1120 aaKnown RBP6.82□□□□□ -1.32
EPCAM-206ENST00000490733 SYMPKQ92797 1274 aaKnown RBP6.82□□□□□ -1.32
EPCAM-206ENST00000490733 SLC26A8Q96RN1 970 aa6.82□□□□□ -1.32
EPCAM-206ENST00000490733 USB1Q9BQ65 265 aaKnown RBP6.82□□□□□ -1.32
EPCAM-206ENST00000490733 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
EPCAM-206ENST00000490733 EID1Q9Y6B2 187 aa6.82□□□□□ -1.32
EPCAM-206ENST00000490733 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
EPCAM-206ENST00000490733 XRN1Q8IZH2 1706 aaKnown RBP6.81□□□□□ -1.32
EPCAM-206ENST00000490733 DLC1Q96QB1 1528 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 NDUFV2P19404 249 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 HSPA2P54652 639 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 ANKLE2Q86XL3 938 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 TECPR2O15040 1411 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 ABCC11Q96J66 1382 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 CCDC7Q96M83 1385 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 DISP3Q9P2K9 1392 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 CPS1P31327 1500 aa6.81□□□□□ -1.32
EPCAM-206ENST00000490733 KIF7Q2M1P5 1343 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 STRCP1A6NGW2 1772 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 NPHP4O75161 1426 aaPredicted RBP6.8□□□□□ -1.32
EPCAM-206ENST00000490733 FDX1P10109 184 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 MMP16P51512 607 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 TRIM67Q6ZTA4 783 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 ZNF598Q86UK7 904 aaKnown RBP6.8□□□□□ -1.32
EPCAM-206ENST00000490733 STK26Q9P289 416 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 TBX22Q9Y458 520 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 PLEKHH1Q9ULM0 1364 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 SBNO2Q9Y2G9 1366 aa6.8□□□□□ -1.32
EPCAM-206ENST00000490733 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.79□□□□□ -1.32
EPCAM-206ENST00000490733 ZNF697Q5TEC3 545 aa6.79□□□□□ -1.32
EPCAM-206ENST00000490733 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
EPCAM-206ENST00000490733 MYOM1P52179 1685 aa6.79□□□□□ -1.32
EPCAM-206ENST00000490733 TULP4Q9NRJ4 1543 aa6.79□□□□□ -1.32
EPCAM-206ENST00000490733 EIF3AQ14152 1382 aaKnown RBP6.79□□□□□ -1.32
EPCAM-206ENST00000490733 ROBO2Q9HCK4 1378 aa6.79□□□□□ -1.32
EPCAM-206ENST00000490733 CENPJQ9HC77 1338 aaPredicted RBP6.78□□□□□ -1.32
EPCAM-206ENST00000490733 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
EPCAM-206ENST00000490733 WAPLQ7Z5K2 1190 aa6.78□□□□□ -1.32
EPCAM-206ENST00000490733 PRAM1Q96QH2 718 aa6.78□□□□□ -1.32
EPCAM-206ENST00000490733 ARXQ96QS3 562 aa6.78□□□□□ -1.32
EPCAM-206ENST00000490733 NWD1Q149M9 1564 aa6.78□□□□□ -1.32
EPCAM-206ENST00000490733 FAM135BQ49AJ0 1406 aa6.77□□□□□ -1.33
EPCAM-206ENST00000490733 C6orf229H3BNL8 230 aa6.77□□□□□ -1.33
EPCAM-206ENST00000490733 RETREG3Q86VR2 466 aa6.77□□□□□ -1.33
EPCAM-206ENST00000490733 PIK3R4Q99570 1358 aa6.77□□□□□ -1.33
EPCAM-206ENST00000490733 PTCH1Q13635 1447 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms