RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 ERVV-2B6SEH9 535 aa15.42■□□□□ 0.06
CDCP1-203ENST00000490471 PHKG2P15735 406 aa15.42■□□□□ 0.06
CDCP1-203ENST00000490471 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
CDCP1-203ENST00000490471 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
CDCP1-203ENST00000490471 PIGBQ92521 554 aa15.42■□□□□ 0.06
CDCP1-203ENST00000490471 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
CDCP1-203ENST00000490471 LOC102724428A0A0B4J2F2 783 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 SSFA2P28290 1259 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 SIK1P57059 783 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 C5P01031 1676 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 ITGB4P16144 1822 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 IGSF1Q8N6C5 1336 aa15.4■□□□□ 0.06
CDCP1-203ENST00000490471 CABP4P57796 275 aa15.39■□□□□ 0.05
CDCP1-203ENST00000490471 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
CDCP1-203ENST00000490471 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
CDCP1-203ENST00000490471 MTHFSP49914 203 aa15.38■□□□□ 0.05
CDCP1-203ENST00000490471 CHD4Q14839 1912 aa15.37■□□□□ 0.05
CDCP1-203ENST00000490471 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
CDCP1-203ENST00000490471 PHF14O94880 888 aa15.36■□□□□ 0.05
CDCP1-203ENST00000490471 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
CDCP1-203ENST00000490471 COL24A1Q17RW2 1714 aa15.35■□□□□ 0.05
CDCP1-203ENST00000490471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.35■□□□□ 0.05
CDCP1-203ENST00000490471 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
CDCP1-203ENST00000490471 TAF1LQ8IZX4 1826 aa15.35■□□□□ 0.05
CDCP1-203ENST00000490471 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 GNPATO15228 680 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 SULT6B1Q6IMI4 303 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
CDCP1-203ENST00000490471 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
CDCP1-203ENST00000490471 NLGN1Q8N2Q7 840 aa15.33■□□□□ 0.04
CDCP1-203ENST00000490471 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
CDCP1-203ENST00000490471 POTEHQ6S545 545 aa15.32■□□□□ 0.04
CDCP1-203ENST00000490471 ZNF784Q8NCA9 323 aaPredicted RBP15.32■□□□□ 0.04
CDCP1-203ENST00000490471 SRCAPQ6ZRS2 3230 aa15.32■□□□□ 0.04
CDCP1-203ENST00000490471 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
CDCP1-203ENST00000490471 DIAPH1O60610 1272 aaKnown RBP15.31■□□□□ 0.04
CDCP1-203ENST00000490471 RFC4P35249 363 aa15.31■□□□□ 0.04
CDCP1-203ENST00000490471 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
CDCP1-203ENST00000490471 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
CDCP1-203ENST00000490471 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
CDCP1-203ENST00000490471 IL13P35225 146 aa15.29■□□□□ 0.04
CDCP1-203ENST00000490471 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
CDCP1-203ENST00000490471 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
CDCP1-203ENST00000490471 RPS6KA4O75676 772 aa15.28■□□□□ 0.04
CDCP1-203ENST00000490471 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
CDCP1-203ENST00000490471 CFAP53Q96M91 514 aa15.28■□□□□ 0.04
CDCP1-203ENST00000490471 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
CDCP1-203ENST00000490471 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 KDRP35968 1356 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 ITPK1Q13572 414 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.04
CDCP1-203ENST00000490471 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
CDCP1-203ENST00000490471 TGFB2P61812 414 aa15.26■□□□□ 0.03
CDCP1-203ENST00000490471 NPC1L1Q9UHC9 1359 aa15.25■□□□□ 0.03
CDCP1-203ENST00000490471 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
CDCP1-203ENST00000490471 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
CDCP1-203ENST00000490471 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
CDCP1-203ENST00000490471 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
CDCP1-203ENST00000490471 MMP10P09238 476 aa15.24■□□□□ 0.03
CDCP1-203ENST00000490471 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
CDCP1-203ENST00000490471 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
CDCP1-203ENST00000490471 SLC52A2Q9HAB3 445 aa15.24■□□□□ 0.03
CDCP1-203ENST00000490471 PER1O15534 1290 aaPredicted RBP15.23■□□□□ 0.03
CDCP1-203ENST00000490471 ZPR1O75312 459 aa15.23■□□□□ 0.03
CDCP1-203ENST00000490471 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
CDCP1-203ENST00000490471 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
CDCP1-203ENST00000490471 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
CDCP1-203ENST00000490471 HMOX1P09601 288 aa15.22■□□□□ 0.03
CDCP1-203ENST00000490471 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
CDCP1-203ENST00000490471 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
CDCP1-203ENST00000490471 NEFMP07197 916 aa15.21■□□□□ 0.03
CDCP1-203ENST00000490471 YBX3P16989 372 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■■■□ 23.9
CDCP1-203ENST00000490471 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
CDCP1-203ENST00000490471 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
CDCP1-203ENST00000490471 TEFQ10587 303 aa15.21■□□□□ 0.03
CDCP1-203ENST00000490471 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
CDCP1-203ENST00000490471 STARD3NLO95772 234 aa15.2■□□□□ 0.02
CDCP1-203ENST00000490471 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
CDCP1-203ENST00000490471 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
CDCP1-203ENST00000490471 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
CDCP1-203ENST00000490471 A0A087WZG4 1122 aa15.18■□□□□ 0.02
CDCP1-203ENST00000490471 GNAT3A8MTJ3 354 aa15.18■□□□□ 0.02
CDCP1-203ENST00000490471 GYS1P13807 737 aa15.18■□□□□ 0.02
CDCP1-203ENST00000490471 CNGB1Q14028 1251 aaPredicted RBP15.18■□□□□ 0.02
CDCP1-203ENST00000490471 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
CDCP1-203ENST00000490471 SLC4A9Q96Q91 983 aa15.18■□□□□ 0.02
CDCP1-203ENST00000490471 SMIM5Q71RC9 77 aa15.17■□□□□ 0.02
CDCP1-203ENST00000490471 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
CDCP1-203ENST00000490471 COL5A3P25940 1745 aaPredicted RBP15.17■□□□□ 0.02
CDCP1-203ENST00000490471 SENP3-EIF4A1A0A087X0R7 540 aa15.16■□□□□ 0.02
CDCP1-203ENST00000490471 RTF1Q92541 710 aaKnown RBP15.16■□□□□ 0.02
CDCP1-203ENST00000490471 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
CDCP1-203ENST00000490471 PIM2Q9P1W9 311 aa15.16■□□□□ 0.02
CDCP1-203ENST00000490471 BCS1LQ9Y276 419 aa15.16■□□□□ 0.02
CDCP1-203ENST00000490471 FCHSD2O94868 740 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms