RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
DUBR-204ENST00000490441 SIK1P57059 783 aa15.36■□□□□ 0.05
DUBR-204ENST00000490441 C4BP0C0L5 1744 aa15.36■□□□□ 0.05
DUBR-204ENST00000490441 PHF14O94880 888 aa15.35■□□□□ 0.05
DUBR-204ENST00000490441 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
DUBR-204ENST00000490441 UTRNP46939 3433 aa15.34■□□□□ 0.05
DUBR-204ENST00000490441 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
DUBR-204ENST00000490441 NLGN2Q8NFZ4 835 aa15.34■□□□□ 0.05
DUBR-204ENST00000490441 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
DUBR-204ENST00000490441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
DUBR-204ENST00000490441 SSFA2P28290 1259 aa15.33■□□□□ 0.04
DUBR-204ENST00000490441 ATP6V1AP38606 617 aa15.33■□□□□ 0.04
DUBR-204ENST00000490441 ZNF530Q6P9A1 599 aaPredicted RBP15.33■□□□□ 0.04
DUBR-204ENST00000490441 ZNF784Q8NCA9 323 aaPredicted RBP15.33■□□□□ 0.04
DUBR-204ENST00000490441 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
DUBR-204ENST00000490441 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
DUBR-204ENST00000490441 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
DUBR-204ENST00000490441 GNPATO15228 680 aa15.31■□□□□ 0.04
DUBR-204ENST00000490441 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
DUBR-204ENST00000490441 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
DUBR-204ENST00000490441 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
DUBR-204ENST00000490441 UBR3Q6ZT12 1888 aa15.31■□□□□ 0.04
DUBR-204ENST00000490441 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 CABP4P57796 275 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 ITPK1Q13572 414 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 SULT6B1Q6IMI4 303 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
DUBR-204ENST00000490441 MTHFSP49914 203 aa15.29■□□□□ 0.04
DUBR-204ENST00000490441 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
DUBR-204ENST00000490441 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
DUBR-204ENST00000490441 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
DUBR-204ENST00000490441 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
DUBR-204ENST00000490441 KDRP35968 1356 aa15.27■□□□□ 0.04
DUBR-204ENST00000490441 IL13P35225 146 aa15.27■□□□□ 0.04
DUBR-204ENST00000490441 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
DUBR-204ENST00000490441 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
DUBR-204ENST00000490441 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
DUBR-204ENST00000490441 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
DUBR-204ENST00000490441 FKBP8Q14318 412 aa15.24■□□□□ 0.03
DUBR-204ENST00000490441 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
DUBR-204ENST00000490441 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
DUBR-204ENST00000490441 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
DUBR-204ENST00000490441 PTCD1O75127 700 aaKnown RBP15.23■□□□□ 0.03
DUBR-204ENST00000490441 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
DUBR-204ENST00000490441 NFATC2IPQ8NCF5 419 aa15.23■□□□□ 0.03
DUBR-204ENST00000490441 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
DUBR-204ENST00000490441 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
DUBR-204ENST00000490441 MMP10P09238 476 aa15.22■□□□□ 0.03
DUBR-204ENST00000490441 AKAP4Q5JQC9 854 aa15.22■□□□□ 0.03
DUBR-204ENST00000490441 DIAPH1O60610 1272 aaKnown RBP15.21■□□□□ 0.03
DUBR-204ENST00000490441 RPS6KA4O75676 772 aa15.21■□□□□ 0.03
DUBR-204ENST00000490441 HMOX1P09601 288 aa15.21■□□□□ 0.03
DUBR-204ENST00000490441 RFC4P35249 363 aa15.21■□□□□ 0.03
DUBR-204ENST00000490441 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
DUBR-204ENST00000490441 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
DUBR-204ENST00000490441 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
DUBR-204ENST00000490441 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
DUBR-204ENST00000490441 COL5A3P25940 1745 aaPredicted RBP15.2■□□□□ 0.02
DUBR-204ENST00000490441 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
DUBR-204ENST00000490441 WWC3Q9ULE0 1092 aa15.19■□□□□ 0.02
DUBR-204ENST00000490441 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
DUBR-204ENST00000490441 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
DUBR-204ENST00000490441 C1QTNF8P60827 252 aa15.18■□□□□ 0.02
DUBR-204ENST00000490441 SLC52A2Q9HAB3 445 aa15.18■□□□□ 0.02
DUBR-204ENST00000490441 NPC1L1Q9UHC9 1359 aa15.18■□□□□ 0.02
DUBR-204ENST00000490441 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
DUBR-204ENST00000490441 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
DUBR-204ENST00000490441 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
DUBR-204ENST00000490441 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
DUBR-204ENST00000490441 RNMTO43148 476 aaKnown RBP15.16■□□□□ 0.02
DUBR-204ENST00000490441 GYS1P13807 737 aa15.16■□□□□ 0.02
DUBR-204ENST00000490441 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
DUBR-204ENST00000490441 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
DUBR-204ENST00000490441 U2SURPO15042 1029 aaKnown RBP15.15■□□□□ 0.02
DUBR-204ENST00000490441 TGFB2P61812 414 aa15.15■□□□□ 0.02
DUBR-204ENST00000490441 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
DUBR-204ENST00000490441 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
DUBR-204ENST00000490441 C10orf71Q711Q0 1435 aa15.14■□□□□ 0.01
DUBR-204ENST00000490441 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
DUBR-204ENST00000490441 MRC1P22897 1456 aa15.14■□□□□ 0.01
DUBR-204ENST00000490441 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
DUBR-204ENST00000490441 TJP1Q07157 1748 aa15.13■□□□□ 0.01
DUBR-204ENST00000490441 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
DUBR-204ENST00000490441 DNAJC10Q8IXB1 793 aa15.13■□□□□ 0.01
DUBR-204ENST00000490441 GPBP1L1Q9HC44 474 aaPredicted RBP15.13■□□□□ 0.01
DUBR-204ENST00000490441 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
DUBR-204ENST00000490441 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
DUBR-204ENST00000490441 ZPR1O75312 459 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 TTC5Q8N0Z6 440 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
DUBR-204ENST00000490441 BCS1LQ9Y276 419 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
DUBR-204ENST00000490441 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
DUBR-204ENST00000490441 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
DUBR-204ENST00000490441 COL3A1P02461 1466 aaPredicted RBP15.11■□□□□ 0.01
DUBR-204ENST00000490441 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
DUBR-204ENST00000490441 DPEP1P16444 411 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms