RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 MIS18AQ9NYP9 233 aa17.05■□□□□ 0.32
HLA-DOA-205ENST00000490305 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 BCAR3O75815 825 aa17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 C8orf58Q8NAV2 365 aa17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 DDX54Q8TDD1 881 aaKnown RBP17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
HLA-DOA-205ENST00000490305 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
HLA-DOA-205ENST00000490305 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
HLA-DOA-205ENST00000490305 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
HLA-DOA-205ENST00000490305 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.32
HLA-DOA-205ENST00000490305 AFF2P51816 1311 aa17.01■□□□□ 0.31
HLA-DOA-205ENST00000490305 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
HLA-DOA-205ENST00000490305 CABP4P57796 275 aa17.01■□□□□ 0.31
HLA-DOA-205ENST00000490305 DDB1Q16531 1140 aa17.01■□□□□ 0.31
HLA-DOA-205ENST00000490305 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
HLA-DOA-205ENST00000490305 KIF16BQ96L93 1317 aa17■□□□□ 0.31
HLA-DOA-205ENST00000490305 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
HLA-DOA-205ENST00000490305 PLIN1O60240 522 aa17■□□□□ 0.31
HLA-DOA-205ENST00000490305 HOXB7P09629 217 aa17■□□□□ 0.31
HLA-DOA-205ENST00000490305 MS4A1P11836 297 aa17■□□□□ 0.31
HLA-DOA-205ENST00000490305 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
HLA-DOA-205ENST00000490305 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
HLA-DOA-205ENST00000490305 CACNA1FO60840 1977 aa17■□□□□ 0.31
HLA-DOA-205ENST00000490305 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
HLA-DOA-205ENST00000490305 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
HLA-DOA-205ENST00000490305 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
HLA-DOA-205ENST00000490305 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
HLA-DOA-205ENST00000490305 ATRNO75882 1429 aa16.97■□□□□ 0.31
HLA-DOA-205ENST00000490305 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
HLA-DOA-205ENST00000490305 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
HLA-DOA-205ENST00000490305 GJD4Q96KN9 370 aaPredicted RBP16.97■□□□□ 0.31
HLA-DOA-205ENST00000490305 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
HLA-DOA-205ENST00000490305 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
HLA-DOA-205ENST00000490305 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
HLA-DOA-205ENST00000490305 ITGB4P16144 1822 aa16.96■□□□□ 0.3
HLA-DOA-205ENST00000490305 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.3
HLA-DOA-205ENST00000490305 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
HLA-DOA-205ENST00000490305 KCNQ3O43525 872 aa16.95■□□□□ 0.3
HLA-DOA-205ENST00000490305 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
HLA-DOA-205ENST00000490305 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
HLA-DOA-205ENST00000490305 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
HLA-DOA-205ENST00000490305 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
HLA-DOA-205ENST00000490305 PAPPAQ13219 1627 aa16.94■□□□□ 0.3
HLA-DOA-205ENST00000490305 GLI3P10071 1580 aa16.94■□□□□ 0.3
HLA-DOA-205ENST00000490305 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
HLA-DOA-205ENST00000490305 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
HLA-DOA-205ENST00000490305 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
HLA-DOA-205ENST00000490305 GIGYF1O75420 1035 aaPredicted RBP16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
HLA-DOA-205ENST00000490305 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 A0A0G2JS52 829 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 MYT1Q01538 1121 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 PTPRCP08575 1304 aa16.91■□□□□ 0.3
HLA-DOA-205ENST00000490305 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
HLA-DOA-205ENST00000490305 SNRPA1P09661 255 aaKnown RBP16.9■□□□□ 0.3
HLA-DOA-205ENST00000490305 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
HLA-DOA-205ENST00000490305 BCL9O00512 1426 aa16.89■□□□□ 0.29
HLA-DOA-205ENST00000490305 TRIM27P14373 513 aa16.89■□□□□ 0.29
HLA-DOA-205ENST00000490305 AAMPQ13685 434 aa16.89■□□□□ 0.29
HLA-DOA-205ENST00000490305 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
HLA-DOA-205ENST00000490305 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
HLA-DOA-205ENST00000490305 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
HLA-DOA-205ENST00000490305 PIGBQ92521 554 aa16.88■□□□□ 0.29
HLA-DOA-205ENST00000490305 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
HLA-DOA-205ENST00000490305 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
HLA-DOA-205ENST00000490305 C5P01031 1676 aa16.87■□□□□ 0.29
HLA-DOA-205ENST00000490305 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 PRIM1P49642 420 aaKnown RBP16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
HLA-DOA-205ENST00000490305 RLBP1P12271 317 aa16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 TEX13AQ9BXU3 409 aaPredicted RBP16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 ABCC4O15439 1325 aa16.85■□□□□ 0.29
HLA-DOA-205ENST00000490305 FLIIQ13045 1269 aa16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms