RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 MARCH10Q8NA82 808 aaPredicted RBP9.72□□□□□ -0.85
CPA4-208ENST00000490117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.85
CPA4-208ENST00000490117 CEMIPQ8WUJ3 1361 aa9.72□□□□□ -0.85
CPA4-208ENST00000490117 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
CPA4-208ENST00000490117 TJP1Q07157 1748 aa9.71□□□□□ -0.85
CPA4-208ENST00000490117 TNS1Q9HBL0 1735 aaKnown RBP9.71□□□□□ -0.85
CPA4-208ENST00000490117 WDR63Q8IWG1 891 aa9.71□□□□□ -0.86
CPA4-208ENST00000490117 ACSBG1Q96GR2 724 aa9.71□□□□□ -0.86
CPA4-208ENST00000490117 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.86
CPA4-208ENST00000490117 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
CPA4-208ENST00000490117 KCNQ3O43525 872 aa9.7□□□□□ -0.86
CPA4-208ENST00000490117 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
CPA4-208ENST00000490117 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
CPA4-208ENST00000490117 TEFQ10587 303 aa9.7□□□□□ -0.86
CPA4-208ENST00000490117 NGEFQ8N5V2 710 aa9.7□□□□□ -0.86
CPA4-208ENST00000490117 MBIPQ9NS73 344 aa9.7□□□□□ -0.86
CPA4-208ENST00000490117 E9PSI1 815 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 LY75O60449 1722 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
CPA4-208ENST00000490117 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 SLC39A6Q13433 755 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 KRT24Q2M2I5 525 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 DUSP27Q5VZP5 1158 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 TAF1LQ8IZX4 1826 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 TSPYL4Q9UJ04 414 aa9.69□□□□□ -0.86
CPA4-208ENST00000490117 KCPQ6ZWJ8 1503 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 IL16Q14005 1332 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 NPM3O75607 178 aaKnown RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 ZNF853P0CG23 659 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 RXRBP28702 533 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 CABP4P57796 275 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 GNAI1P63096 354 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 SYTL4Q96C24 671 aaPredicted RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 CACNA1FO60840 1977 aa9.68□□□□□ -0.86
CPA4-208ENST00000490117 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
CPA4-208ENST00000490117 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
CPA4-208ENST00000490117 ONECUT3O60422 494 aaPredicted RBP9.67□□□□□ -0.86
CPA4-208ENST00000490117 CALD1Q05682 793 aaKnown RBP9.67□□□□□ -0.86
CPA4-208ENST00000490117 TAF7Q15545 349 aaPredicted RBP9.67□□□□□ -0.86
CPA4-208ENST00000490117 PTF1AQ7RTS3 328 aa9.67□□□□□ -0.86
CPA4-208ENST00000490117 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
CPA4-208ENST00000490117 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
CPA4-208ENST00000490117 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
CPA4-208ENST00000490117 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 CHL1O00533 1208 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 KCNQ2O43526 872 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
CPA4-208ENST00000490117 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 TSPYL6Q8N831 410 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 TMOD3Q9NYL9 352 aa9.66□□□□□ -0.86
CPA4-208ENST00000490117 BCL9O00512 1426 aa9.65□□□□□ -0.86
CPA4-208ENST00000490117 TCERG1O14776 1098 aaKnown RBP9.65□□□□□ -0.86
CPA4-208ENST00000490117 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.86
CPA4-208ENST00000490117 PIGBQ92521 554 aa9.65□□□□□ -0.86
CPA4-208ENST00000490117 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
CPA4-208ENST00000490117 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
CPA4-208ENST00000490117 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
CPA4-208ENST00000490117 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
CPA4-208ENST00000490117 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
CPA4-208ENST00000490117 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
CPA4-208ENST00000490117 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
CPA4-208ENST00000490117 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
CPA4-208ENST00000490117 ASAP1Q9ULH1 1129 aa9.63□□□□□ -0.87
CPA4-208ENST00000490117 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
CPA4-208ENST00000490117 ZNF831Q5JPB2 1677 aa9.62□□□□□ -0.87
CPA4-208ENST00000490117 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
CPA4-208ENST00000490117 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
CPA4-208ENST00000490117 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
CPA4-208ENST00000490117 TTC5Q8N0Z6 440 aa9.62□□□□□ -0.87
CPA4-208ENST00000490117 ZNF496Q96IT1 587 aaPredicted RBP9.62□□□□□ -0.87
CPA4-208ENST00000490117 RBM42Q9BTD8 480 aaKnown RBP9.62□□□□□ -0.87
CPA4-208ENST00000490117 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
CPA4-208ENST00000490117 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
CPA4-208ENST00000490117 ARFGEF2Q9Y6D5 1785 aa9.62□□□□□ -0.87
CPA4-208ENST00000490117 RREB1Q92766 1687 aa9.61□□□□□ -0.87
CPA4-208ENST00000490117 RCAN3Q9UKA8 241 aa9.61□□□□□ -0.87
CPA4-208ENST00000490117 NUP188Q5SRE5 1749 aa9.61□□□□□ -0.87
CPA4-208ENST00000490117 PALLDQ8WX93 1383 aa9.61□□□□□ -0.87
CPA4-208ENST00000490117 RGPD3A6NKT7 1758 aaPredicted RBP9.6□□□□□ -0.87
CPA4-208ENST00000490117 RGPD4Q7Z3J3 1758 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 VAMP4O75379 141 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 BCAR3O75815 825 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 TRIM37O94972 964 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 EIF2S2P20042 333 aaKnown RBP9.6□□□□□ -0.87
CPA4-208ENST00000490117 PIP4K2AP48426 406 aaPredicted RBP9.6□□□□□ -0.87
CPA4-208ENST00000490117 BABAM1Q9NWV8 329 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 HEG1Q9ULI3 1381 aa9.6□□□□□ -0.87
CPA4-208ENST00000490117 C4AP0C0L4 1744 aa9.59□□□□□ -0.87
CPA4-208ENST00000490117 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
CPA4-208ENST00000490117 ANXA1P04083 346 aa9.59□□□□□ -0.87
CPA4-208ENST00000490117 KCNQ4P56696 695 aa9.59□□□□□ -0.87
CPA4-208ENST00000490117 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
CPA4-208ENST00000490117 FAM196AQ6ZSG2 479 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms