RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 EYA1Q99502 592 aa15.01□□□□□ -0.01
PTP4A2-206ENST00000489313 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
PTP4A2-206ENST00000489313 GNPATO15228 680 aa15□□□□□ -0.01
PTP4A2-206ENST00000489313 IFFO2Q5TF58 517 aa15□□□□□ -0.01
PTP4A2-206ENST00000489313 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
PTP4A2-206ENST00000489313 PHKG2P15735 406 aa14.98□□□□□ -0.01
PTP4A2-206ENST00000489313 ATP6V1AP38606 617 aa14.98□□□□□ -0.01
PTP4A2-206ENST00000489313 IFNL2Q8IZJ0 200 aa14.98□□□□□ -0.01
PTP4A2-206ENST00000489313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTP4A2-206ENST00000489313 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
PTP4A2-206ENST00000489313 MMP10P09238 476 aa14.97□□□□□ -0.01
PTP4A2-206ENST00000489313 HSPA6P17066 643 aa14.97□□□□□ -0.01
PTP4A2-206ENST00000489313 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
PTP4A2-206ENST00000489313 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
PTP4A2-206ENST00000489313 KIAA1551Q9HCM1 1747 aa14.96□□□□□ -0.01
PTP4A2-206ENST00000489313 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
PTP4A2-206ENST00000489313 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
PTP4A2-206ENST00000489313 PXDNLA1KZ92 1463 aa14.95□□□□□ -0.02
PTP4A2-206ENST00000489313 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
PTP4A2-206ENST00000489313 EIF4A2Q14240 407 aaKnown RBP14.94□□□□□ -0.02
PTP4A2-206ENST00000489313 KDRP35968 1356 aa14.94□□□□□ -0.02
PTP4A2-206ENST00000489313 KIF3CO14782 793 aa14.94□□□□□ -0.02
PTP4A2-206ENST00000489313 SLC4A9Q96Q91 983 aa14.94□□□□□ -0.02
PTP4A2-206ENST00000489313 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
PTP4A2-206ENST00000489313 PCNTO95613 3336 aa14.93□□□□□ -0.02
PTP4A2-206ENST00000489313 COL5A3P25940 1745 aaPredicted RBP14.93□□□□□ -0.02
PTP4A2-206ENST00000489313 TRAPPC3LQ5T215 181 aa14.93□□□□□ -0.02
PTP4A2-206ENST00000489313 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
PTP4A2-206ENST00000489313 RTCBQ9Y3I0 505 aaKnown RBP14.93□□□□□ -0.02
PTP4A2-206ENST00000489313 A0A0G2JLW4 131 aa14.92□□□□□ -0.02
PTP4A2-206ENST00000489313 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
PTP4A2-206ENST00000489313 MYH14Q7Z406 1995 aaKnown RBP14.92□□□□□ -0.02
PTP4A2-206ENST00000489313 C10orf71Q711Q0 1435 aa14.91□□□□□ -0.02
PTP4A2-206ENST00000489313 ZNF831Q5JPB2 1677 aa14.91□□□□□ -0.02
PTP4A2-206ENST00000489313 C4AP0C0L4 1744 aa14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 ARHGEF1Q92888 912 aaKnown RBP14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 TGFB2P61812 414 aa14.9□□□□□ -0.02
PTP4A2-206ENST00000489313 GYS1P13807 737 aa14.89□□□□□ -0.03
PTP4A2-206ENST00000489313 DPEP1P16444 411 aa14.89□□□□□ -0.03
PTP4A2-206ENST00000489313 ARHGAP27Q6ZUM4 889 aa14.89□□□□□ -0.03
PTP4A2-206ENST00000489313 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
PTP4A2-206ENST00000489313 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 RFC4P35249 363 aa14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 RC3H1Q5TC82 1133 aaKnown RBP14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 ZNF530Q6P9A1 599 aaPredicted RBP14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
PTP4A2-206ENST00000489313 RPS6KA4O75676 772 aa14.87□□□□□ -0.03
PTP4A2-206ENST00000489313 FCHSD2O94868 740 aa14.87□□□□□ -0.03
PTP4A2-206ENST00000489313 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
PTP4A2-206ENST00000489313 CABP4P57796 275 aa14.87□□□□□ -0.03
PTP4A2-206ENST00000489313 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
PTP4A2-206ENST00000489313 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
PTP4A2-206ENST00000489313 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
PTP4A2-206ENST00000489313 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
PTP4A2-206ENST00000489313 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
PTP4A2-206ENST00000489313 ARFGEF1Q9Y6D6 1849 aa14.86□□□□□ -0.03
PTP4A2-206ENST00000489313 NMRK2Q9NPI5 230 aa14.85□□□□□ -0.03
PTP4A2-206ENST00000489313 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
PTP4A2-206ENST00000489313 AEBP1Q8IUX7 1158 aa14.85□□□□□ -0.03
PTP4A2-206ENST00000489313 SRP68Q9UHB9 627 aaKnown RBP14.85□□□□□ -0.03
PTP4A2-206ENST00000489313 TJP1Q07157 1748 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 CAPN15O75808 1086 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 TOMM70O94826 608 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 KCNA3P22001 575 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 MTHFSP49914 203 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 APLP1P51693 650 aa14.84□□□□□ -0.03
PTP4A2-206ENST00000489313 CRKLP46109 303 aaKnown RBP14.83□□□□□ -0.04
PTP4A2-206ENST00000489313 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
PTP4A2-206ENST00000489313 NFATC2IPQ8NCF5 419 aa14.83□□□□□ -0.04
PTP4A2-206ENST00000489313 PANK3Q9H999 370 aa14.83□□□□□ -0.04
PTP4A2-206ENST00000489313 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
PTP4A2-206ENST00000489313 FKBP8Q14318 412 aa14.82□□□□□ -0.04
PTP4A2-206ENST00000489313 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
PTP4A2-206ENST00000489313 C9orf131Q5VYM1 1079 aa14.82□□□□□ -0.04
PTP4A2-206ENST00000489313 DDR1Q08345 913 aa14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 DNAJC5GQ8N7S2 189 aa14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 SCN11AQ9UI33 1791 aa14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 USP42Q9H9J4 1324 aaKnown RBP14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
PTP4A2-206ENST00000489313 WDR90Q96KV7 1748 aa14.8□□□□□ -0.04
PTP4A2-206ENST00000489313 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
PTP4A2-206ENST00000489313 MORC1Q86VD1 984 aa14.8□□□□□ -0.04
PTP4A2-206ENST00000489313 PLSCR2Q9NRY7 297 aa14.8□□□□□ -0.04
PTP4A2-206ENST00000489313 ADAMTS7Q9UKP4 1686 aa14.8□□□□□ -0.04
PTP4A2-206ENST00000489313 SBF1O95248 1867 aa14.79□□□□□ -0.04
PTP4A2-206ENST00000489313 CHRNA5P30532 468 aa14.79□□□□□ -0.04
PTP4A2-206ENST00000489313 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
PTP4A2-206ENST00000489313 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
PTP4A2-206ENST00000489313 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
PTP4A2-206ENST00000489313 HSPA5P11021 654 aaKnown RBP14.78□□□□□ -0.04
PTP4A2-206ENST00000489313 HTRA3P83110 453 aa14.78□□□□□ -0.04
PTP4A2-206ENST00000489313 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
PTP4A2-206ENST00000489313 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
PTP4A2-206ENST00000489313 VIRMAQ69YN4 1812 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms