RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
GAPDHP47-201ENST00000489113 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
GAPDHP47-201ENST00000489113 MYOM1P52179 1685 aa11.92□□□□□ -0.5
GAPDHP47-201ENST00000489113 CC2D1BQ5T0F9 858 aaKnown RBP11.92□□□□□ -0.5
GAPDHP47-201ENST00000489113 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
GAPDHP47-201ENST00000489113 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
GAPDHP47-201ENST00000489113 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
GAPDHP47-201ENST00000489113 PAPPAQ13219 1627 aa11.91□□□□□ -0.5
GAPDHP47-201ENST00000489113 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
GAPDHP47-201ENST00000489113 ITPK1Q13572 414 aa11.91□□□□□ -0.5
GAPDHP47-201ENST00000489113 IL13P35225 146 aa11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 RFC4P35249 363 aa11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 NCAPD2Q15021 1401 aa11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
GAPDHP47-201ENST00000489113 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
GAPDHP47-201ENST00000489113 KIF20BQ96Q89 1820 aa11.89□□□□□ -0.51
GAPDHP47-201ENST00000489113 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
GAPDHP47-201ENST00000489113 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
GAPDHP47-201ENST00000489113 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
GAPDHP47-201ENST00000489113 MMP10P09238 476 aa11.88□□□□□ -0.51
GAPDHP47-201ENST00000489113 HMOX1P09601 288 aa11.88□□□□□ -0.51
GAPDHP47-201ENST00000489113 YBX3P16989 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
GAPDHP47-201ENST00000489113 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
GAPDHP47-201ENST00000489113 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
GAPDHP47-201ENST00000489113 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
GAPDHP47-201ENST00000489113 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
GAPDHP47-201ENST00000489113 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
GAPDHP47-201ENST00000489113 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
GAPDHP47-201ENST00000489113 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
GAPDHP47-201ENST00000489113 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
GAPDHP47-201ENST00000489113 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
GAPDHP47-201ENST00000489113 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
GAPDHP47-201ENST00000489113 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
GAPDHP47-201ENST00000489113 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 CRKLP46109 303 aaKnown RBP11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 SLC4A9Q96Q91 983 aa11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
GAPDHP47-201ENST00000489113 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
GAPDHP47-201ENST00000489113 ZPR1O75312 459 aa11.83□□□□□ -0.52
GAPDHP47-201ENST00000489113 TTC5Q8N0Z6 440 aa11.83□□□□□ -0.52
GAPDHP47-201ENST00000489113 LGR6Q9HBX8 967 aa11.83□□□□□ -0.52
GAPDHP47-201ENST00000489113 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
GAPDHP47-201ENST00000489113 KDRP35968 1356 aa11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 TGFB2P61812 414 aa11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 LY75O60449 1722 aa11.82□□□□□ -0.52
GAPDHP47-201ENST00000489113 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 GYS1P13807 737 aa11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 TEFQ10587 303 aa11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 NPM2Q86SE8 214 aaKnown RBP11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
GAPDHP47-201ENST00000489113 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
GAPDHP47-201ENST00000489113 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
GAPDHP47-201ENST00000489113 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
GAPDHP47-201ENST00000489113 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
GAPDHP47-201ENST00000489113 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
GAPDHP47-201ENST00000489113 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
GAPDHP47-201ENST00000489113 FCHSD2O94868 740 aa11.79□□□□□ -0.52
GAPDHP47-201ENST00000489113 STARD3NLO95772 234 aa11.79□□□□□ -0.52
GAPDHP47-201ENST00000489113 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
GAPDHP47-201ENST00000489113 C5P01031 1676 aa11.78□□□□□ -0.52
GAPDHP47-201ENST00000489113 DPEP1P16444 411 aa11.78□□□□□ -0.52
GAPDHP47-201ENST00000489113 FKBP8Q14318 412 aa11.78□□□□□ -0.52
GAPDHP47-201ENST00000489113 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
GAPDHP47-201ENST00000489113 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
GAPDHP47-201ENST00000489113 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.52
GAPDHP47-201ENST00000489113 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 NPC1L1Q9UHC9 1359 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
GAPDHP47-201ENST00000489113 NEFMP07197 916 aa11.76□□□□□ -0.53
GAPDHP47-201ENST00000489113 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
GAPDHP47-201ENST00000489113 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
GAPDHP47-201ENST00000489113 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
GAPDHP47-201ENST00000489113 A0A087WZG4 1122 aa11.75□□□□□ -0.53
GAPDHP47-201ENST00000489113 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
GAPDHP47-201ENST00000489113 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
GAPDHP47-201ENST00000489113 NPHP1O15259 732 aa11.74□□□□□ -0.53
GAPDHP47-201ENST00000489113 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
GAPDHP47-201ENST00000489113 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
GAPDHP47-201ENST00000489113 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms