RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
USP11-210ENST00000489030 POLKQ9UBT6 870 aa15.88■□□□□ 0.13
USP11-210ENST00000489030 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
USP11-210ENST00000489030 WASHC2AQ641Q2 1341 aa15.88■□□□□ 0.13
USP11-210ENST00000489030 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
USP11-210ENST00000489030 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
USP11-210ENST00000489030 KDRP35968 1356 aa15.87■□□□□ 0.13
USP11-210ENST00000489030 ANKRD26Q9UPS8 1709 aa15.86■□□□□ 0.13
USP11-210ENST00000489030 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
USP11-210ENST00000489030 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
USP11-210ENST00000489030 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
USP11-210ENST00000489030 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
USP11-210ENST00000489030 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
USP11-210ENST00000489030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP11-210ENST00000489030 N4BP2Q86UW6 1770 aaPredicted RBP15.84■□□□□ 0.13
USP11-210ENST00000489030 DPEP1P16444 411 aa15.83■□□□□ 0.12
USP11-210ENST00000489030 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
USP11-210ENST00000489030 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
USP11-210ENST00000489030 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
USP11-210ENST00000489030 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
USP11-210ENST00000489030 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
USP11-210ENST00000489030 KDM6AO15550 1401 aaPredicted RBP15.81■□□□□ 0.12
USP11-210ENST00000489030 GYS1P13807 737 aa15.81■□□□□ 0.12
USP11-210ENST00000489030 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
USP11-210ENST00000489030 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
USP11-210ENST00000489030 KCNA3P22001 575 aa15.8■□□□□ 0.12
USP11-210ENST00000489030 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
USP11-210ENST00000489030 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
USP11-210ENST00000489030 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
USP11-210ENST00000489030 MYH14Q7Z406 1995 aaKnown RBP15.79■□□□□ 0.12
USP11-210ENST00000489030 ARHGAP27Q6ZUM4 889 aa15.79■□□□□ 0.12
USP11-210ENST00000489030 DNAJC5GQ8N7S2 189 aa15.79■□□□□ 0.12
USP11-210ENST00000489030 SRP68Q9UHB9 627 aaKnown RBP15.79■□□□□ 0.12
USP11-210ENST00000489030 HTRA3P83110 453 aa15.78■□□□□ 0.12
USP11-210ENST00000489030 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
USP11-210ENST00000489030 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
USP11-210ENST00000489030 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.12
USP11-210ENST00000489030 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
USP11-210ENST00000489030 TGFB2P61812 414 aa15.77■□□□□ 0.12
USP11-210ENST00000489030 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.12
USP11-210ENST00000489030 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
USP11-210ENST00000489030 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
USP11-210ENST00000489030 FCHSD2O94868 740 aa15.76■□□□□ 0.11
USP11-210ENST00000489030 EIF4G2P78344 907 aaKnown RBP eCLIP15.76■□□□□ 0.11
USP11-210ENST00000489030 DDR1Q08345 913 aa15.76■□□□□ 0.11
USP11-210ENST00000489030 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
USP11-210ENST00000489030 ZNF530Q6P9A1 599 aaPredicted RBP15.76■□□□□ 0.11
USP11-210ENST00000489030 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
USP11-210ENST00000489030 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
USP11-210ENST00000489030 FKBP8Q14318 412 aa15.75■□□□□ 0.11
USP11-210ENST00000489030 C9orf131Q5VYM1 1079 aa15.75■□□□□ 0.11
USP11-210ENST00000489030 DCAF5Q96JK2 942 aa15.75■□□□□ 0.11
USP11-210ENST00000489030 TOMM70O94826 608 aa15.74■□□□□ 0.11
USP11-210ENST00000489030 RFC4P35249 363 aa15.74■□□□□ 0.11
USP11-210ENST00000489030 CRKLP46109 303 aaKnown RBP15.74■□□□□ 0.11
USP11-210ENST00000489030 APLP1P51693 650 aa15.74■□□□□ 0.11
USP11-210ENST00000489030 CCDC87Q9NVE4 849 aa15.74■□□□□ 0.11
USP11-210ENST00000489030 BRCA1P38398 1863 aaKnown RBP15.74■□□□□ 0.11
USP11-210ENST00000489030 ADRA2BP18089 450 aa15.73■□□□□ 0.11
USP11-210ENST00000489030 CHRNA5P30532 468 aa15.73■□□□□ 0.11
USP11-210ENST00000489030 CABP4P57796 275 aa15.73■□□□□ 0.11
USP11-210ENST00000489030 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
USP11-210ENST00000489030 PLEKHO1Q53GL0 409 aaPredicted RBP15.72■□□□□ 0.11
USP11-210ENST00000489030 ZNF831Q5JPB2 1677 aa15.72■□□□□ 0.11
USP11-210ENST00000489030 INTS5Q6P9B9 1019 aaKnown RBP15.71■□□□□ 0.11
USP11-210ENST00000489030 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
USP11-210ENST00000489030 PANK3Q9H999 370 aa15.71■□□□□ 0.11
USP11-210ENST00000489030 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
USP11-210ENST00000489030 USP42Q9H9J4 1324 aaKnown RBP15.7■□□□□ 0.1
USP11-210ENST00000489030 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
USP11-210ENST00000489030 MTHFSP49914 203 aa15.7■□□□□ 0.1
USP11-210ENST00000489030 TJP1Q07157 1748 aa15.7■□□□□ 0.1
USP11-210ENST00000489030 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
USP11-210ENST00000489030 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
USP11-210ENST00000489030 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
USP11-210ENST00000489030 PRELPP51888 382 aa15.69■□□□□ 0.1
USP11-210ENST00000489030 PLEKHG2Q9H7P9 1386 aa15.68■□□□□ 0.1
USP11-210ENST00000489030 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
USP11-210ENST00000489030 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
USP11-210ENST00000489030 RNF181Q9P0P0 153 aa15.68■□□□□ 0.1
USP11-210ENST00000489030 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
USP11-210ENST00000489030 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 TM4SF1P30408 202 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 RASSF7Q02833 373 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
USP11-210ENST00000489030 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
USP11-210ENST00000489030 RRAGCQ9HB90 399 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
USP11-210ENST00000489030 IL13P35225 146 aa15.66■□□□□ 0.1
USP11-210ENST00000489030 SLC39A6Q13433 755 aa15.66■□□□□ 0.1
USP11-210ENST00000489030 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
USP11-210ENST00000489030 WDR90Q96KV7 1748 aa15.65■□□□□ 0.1
USP11-210ENST00000489030 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
USP11-210ENST00000489030 COL13A1Q5TAT6 717 aaPredicted RBP15.65■□□□□ 0.1
USP11-210ENST00000489030 NFIXQ14938 502 aa15.64■□□□□ 0.09
USP11-210ENST00000489030 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
USP11-210ENST00000489030 SOS1Q07889 1333 aaPredicted RBP15.64■□□□□ 0.09
USP11-210ENST00000489030 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
USP11-210ENST00000489030 KLRG1Q96E93 195 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms