RNA–Protein interactions for RNA: ENST00000488411.1

ZC3H11A-210, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-210ENST00000488411 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
ZC3H11A-210ENST00000488411 SLC35F4A4IF30 521 aa9.56□□□□□ -0.88
ZC3H11A-210ENST00000488411 Q6ZVU0 165 aa9.56□□□□□ -0.88
ZC3H11A-210ENST00000488411 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
ZC3H11A-210ENST00000488411 KDM5CP41229 1560 aa9.55□□□□□ -0.88
ZC3H11A-210ENST00000488411 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
ZC3H11A-210ENST00000488411 SPINT1O43278 529 aa9.55□□□□□ -0.88
ZC3H11A-210ENST00000488411 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
ZC3H11A-210ENST00000488411 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
ZC3H11A-210ENST00000488411 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
ZC3H11A-210ENST00000488411 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
ZC3H11A-210ENST00000488411 TRAPPC8Q9Y2L5 1435 aa9.54□□□□□ -0.88
ZC3H11A-210ENST00000488411 MLH3Q9UHC1 1453 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 SETD1BQ9UPS6 1966 aaKnown RBP9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
ZC3H11A-210ENST00000488411 ABCC1P33527 1531 aa9.52□□□□□ -0.88
ZC3H11A-210ENST00000488411 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 ITGA6P23229 1130 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 IRS1P35568 1242 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 FOXK2Q01167 660 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 CBLBQ13191 982 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 GPAT2Q6NUI2 795 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 TSC1Q92574 1164 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 FYCO1Q9BQS8 1478 aa9.52□□□□□ -0.89
ZC3H11A-210ENST00000488411 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 REREQ9P2R6 1566 aa9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 LILRB3O75022 631 aa9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 SV2AQ7L0J3 742 aa9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
ZC3H11A-210ENST00000488411 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 QPCTQ16769 361 aa9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 C3P01024 1663 aa9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 SPAG9O60271 1321 aaKnown RBP9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 KIDINS220Q9ULH0 1771 aa9.5□□□□□ -0.89
ZC3H11A-210ENST00000488411 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 AGLP35573 1532 aa9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 CCNB3Q8WWL7 1395 aa9.49□□□□□ -0.89
ZC3H11A-210ENST00000488411 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
ZC3H11A-210ENST00000488411 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
ZC3H11A-210ENST00000488411 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
ZC3H11A-210ENST00000488411 CNTLNQ9NXG0 1405 aa9.48□□□□□ -0.89
ZC3H11A-210ENST00000488411 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 SYCP2Q9BX26 1530 aa9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 GPATCH8Q9UKJ3 1502 aaKnown RBP9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 SAMD9LQ8IVG5 1584 aa9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 SUPT6HQ7KZ85 1726 aaKnown RBP9.47□□□□□ -0.89
ZC3H11A-210ENST00000488411 CDC14CA4D256 554 aa9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 TRIM66O15016 1216 aa9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 PLEKHH2Q8IVE3 1493 aa9.46□□□□□ -0.9
ZC3H11A-210ENST00000488411 CTSOP43234 321 aaPredicted RBP9.45□□□□□ -0.9
ZC3H11A-210ENST00000488411 GGT6Q6P531 493 aa9.45□□□□□ -0.9
ZC3H11A-210ENST00000488411 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
ZC3H11A-210ENST00000488411 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
ZC3H11A-210ENST00000488411 ATP7AQ04656 1500 aa9.45□□□□□ -0.9
ZC3H11A-210ENST00000488411 ADAMTS2O95450 1211 aa9.44□□□□□ -0.9
ZC3H11A-210ENST00000488411 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
ZC3H11A-210ENST00000488411 PTPRTO14522 1441 aa9.44□□□□□ -0.9
ZC3H11A-210ENST00000488411 KIAA1107Q9UPP5 1409 aa9.44□□□□□ -0.9
ZC3H11A-210ENST00000488411 A2MP01023 1474 aa9.43□□□□□ -0.9
ZC3H11A-210ENST00000488411 SRSF11Q05519 484 aaKnown RBP9.43□□□□□ -0.9
ZC3H11A-210ENST00000488411 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
ZC3H11A-210ENST00000488411 LYPD4Q6UWN0 246 aa9.43□□□□□ -0.9
ZC3H11A-210ENST00000488411 MROH2AA6NES4 1674 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 NPATQ14207 1427 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 ZNF644Q9H582 1327 aaPredicted RBP9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 RNF217Q8TC41 542 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 AGBL1Q96MI9 1066 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 ARHGAP9Q9BRR9 750 aa9.42□□□□□ -0.9
ZC3H11A-210ENST00000488411 RELBQ01201 579 aa9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 MAP3K10Q02779 954 aa9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 POLMQ9NP87 494 aaPredicted RBP9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 INO80Q9ULG1 1556 aaPredicted RBP9.41□□□□□ -0.9
ZC3H11A-210ENST00000488411 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms