RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
TM2D1-209ENST00000488410 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
TM2D1-209ENST00000488410 GNPATO15228 680 aa13.39□□□□□ -0.27
TM2D1-209ENST00000488410 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
TM2D1-209ENST00000488410 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
TM2D1-209ENST00000488410 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
TM2D1-209ENST00000488410 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
TM2D1-209ENST00000488410 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
TM2D1-209ENST00000488410 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
TM2D1-209ENST00000488410 CABP4P57796 275 aa13.38□□□□□ -0.27
TM2D1-209ENST00000488410 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
TM2D1-209ENST00000488410 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
TM2D1-209ENST00000488410 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 MTHFSP49914 203 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
TM2D1-209ENST00000488410 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
TM2D1-209ENST00000488410 ERVV-2B6SEH9 535 aa13.36□□□□□ -0.27
TM2D1-209ENST00000488410 SSFA2P28290 1259 aa13.36□□□□□ -0.27
TM2D1-209ENST00000488410 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
TM2D1-209ENST00000488410 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
TM2D1-209ENST00000488410 RTCBQ9Y3I0 505 aaKnown RBP13.36□□□□□ -0.27
TM2D1-209ENST00000488410 ITPK1Q13572 414 aa13.35□□□□□ -0.27
TM2D1-209ENST00000488410 DCAF5Q96JK2 942 aa13.35□□□□□ -0.27
TM2D1-209ENST00000488410 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
TM2D1-209ENST00000488410 RFC4P35249 363 aa13.34□□□□□ -0.27
TM2D1-209ENST00000488410 SULT6B1Q6IMI4 303 aa13.34□□□□□ -0.27
TM2D1-209ENST00000488410 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
TM2D1-209ENST00000488410 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
TM2D1-209ENST00000488410 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
TM2D1-209ENST00000488410 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
TM2D1-209ENST00000488410 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
TM2D1-209ENST00000488410 MMP10P09238 476 aa13.32□□□□□ -0.28
TM2D1-209ENST00000488410 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
TM2D1-209ENST00000488410 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
TM2D1-209ENST00000488410 UTRNP46939 3433 aa13.32□□□□□ -0.28
TM2D1-209ENST00000488410 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
TM2D1-209ENST00000488410 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
TM2D1-209ENST00000488410 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
TM2D1-209ENST00000488410 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
TM2D1-209ENST00000488410 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
TM2D1-209ENST00000488410 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
TM2D1-209ENST00000488410 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
TM2D1-209ENST00000488410 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
TM2D1-209ENST00000488410 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
TM2D1-209ENST00000488410 IL13P35225 146 aa13.27□□□□□ -0.29
TM2D1-209ENST00000488410 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.29
TM2D1-209ENST00000488410 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
TM2D1-209ENST00000488410 HMOX1P09601 288 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 TGFB2P61812 414 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
TM2D1-209ENST00000488410 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 PLEKHG2Q9H7P9 1386 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 ATP10DQ9P241 1426 aa13.26□□□□□ -0.29
TM2D1-209ENST00000488410 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
TM2D1-209ENST00000488410 ZPR1O75312 459 aa13.25□□□□□ -0.29
TM2D1-209ENST00000488410 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
TM2D1-209ENST00000488410 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
TM2D1-209ENST00000488410 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
TM2D1-209ENST00000488410 FCHSD2O94868 740 aa13.24□□□□□ -0.29
TM2D1-209ENST00000488410 GYS1P13807 737 aa13.24□□□□□ -0.29
TM2D1-209ENST00000488410 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
TM2D1-209ENST00000488410 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
TM2D1-209ENST00000488410 DPEP1P16444 411 aa13.23□□□□□ -0.29
TM2D1-209ENST00000488410 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
TM2D1-209ENST00000488410 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
TM2D1-209ENST00000488410 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
TM2D1-209ENST00000488410 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
TM2D1-209ENST00000488410 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
TM2D1-209ENST00000488410 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
TM2D1-209ENST00000488410 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
TM2D1-209ENST00000488410 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 KDRP35968 1356 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
TM2D1-209ENST00000488410 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
TM2D1-209ENST00000488410 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
TM2D1-209ENST00000488410 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 SLC52A2Q9HAB3 445 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 PIM2Q9P1W9 311 aa13.21□□□□□ -0.29
TM2D1-209ENST00000488410 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.3
TM2D1-209ENST00000488410 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
TM2D1-209ENST00000488410 FKBP8Q14318 412 aa13.2□□□□□ -0.3
TM2D1-209ENST00000488410 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
TM2D1-209ENST00000488410 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
TM2D1-209ENST00000488410 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
TM2D1-209ENST00000488410 DALRD3Q5D0E6 543 aaKnown RBP13.19□□□□□ -0.3
TM2D1-209ENST00000488410 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
TM2D1-209ENST00000488410 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
TM2D1-209ENST00000488410 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
TM2D1-209ENST00000488410 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
TM2D1-209ENST00000488410 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
TM2D1-209ENST00000488410 PXDNLA1KZ92 1463 aa13.17□□□□□ -0.3
TM2D1-209ENST00000488410 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
TM2D1-209ENST00000488410 STARD3NLO95772 234 aa13.17□□□□□ -0.3
TM2D1-209ENST00000488410 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms