RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ZNF530Q6P9A1 599 aaPredicted RBP20.9■□□□□ 0.94
TRIM50-203ENST00000488217 AEBP1Q8IUX7 1158 aa20.9■□□□□ 0.94
TRIM50-203ENST00000488217 RBM42Q9BTD8 480 aaKnown RBP20.9■□□□□ 0.94
TRIM50-203ENST00000488217 IL13P35225 146 aa20.89■□□□□ 0.93
TRIM50-203ENST00000488217 SLC4A9Q96Q91 983 aa20.89■□□□□ 0.93
TRIM50-203ENST00000488217 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
TRIM50-203ENST00000488217 RTCBQ9Y3I0 505 aaKnown RBP20.88■□□□□ 0.93
TRIM50-203ENST00000488217 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
TRIM50-203ENST00000488217 RC3H1Q5TC82 1133 aaKnown RBP20.87■□□□□ 0.93
TRIM50-203ENST00000488217 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
TRIM50-203ENST00000488217 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
TRIM50-203ENST00000488217 COL24A1Q17RW2 1714 aa20.87■□□□□ 0.93
TRIM50-203ENST00000488217 C1QTNF8P60827 252 aa20.86■□□□□ 0.93
TRIM50-203ENST00000488217 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
TRIM50-203ENST00000488217 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
TRIM50-203ENST00000488217 ARHGEF1Q92888 912 aaKnown RBP20.84■□□□□ 0.93
TRIM50-203ENST00000488217 KIF7Q2M1P5 1343 aa20.83■□□□□ 0.93
TRIM50-203ENST00000488217 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
TRIM50-203ENST00000488217 RPS6KA4O75676 772 aa20.83■□□□□ 0.93
TRIM50-203ENST00000488217 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.92
TRIM50-203ENST00000488217 C4BP0C0L5 1744 aa20.82■□□□□ 0.92
TRIM50-203ENST00000488217 TOGARAM1Q9Y4F4 1720 aa20.82■□□□□ 0.92
TRIM50-203ENST00000488217 PTCD1O75127 700 aaKnown RBP20.82■□□□□ 0.92
TRIM50-203ENST00000488217 MMP10P09238 476 aa20.82■□□□□ 0.92
TRIM50-203ENST00000488217 TUBGCP6Q96RT7 1819 aa20.82■□□□□ 0.92
TRIM50-203ENST00000488217 C5P01031 1676 aa20.81■□□□□ 0.92
TRIM50-203ENST00000488217 ADRA2BP18089 450 aa20.81■□□□□ 0.92
TRIM50-203ENST00000488217 RFC4P35249 363 aa20.81■□□□□ 0.92
TRIM50-203ENST00000488217 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
TRIM50-203ENST00000488217 ITGB4P16144 1822 aa20.8■□□□□ 0.92
TRIM50-203ENST00000488217 AKAP4Q5JQC9 854 aa20.79■□□□□ 0.92
TRIM50-203ENST00000488217 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
TRIM50-203ENST00000488217 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
TRIM50-203ENST00000488217 KDRP35968 1356 aa20.78■□□□□ 0.92
TRIM50-203ENST00000488217 CC2D1BQ5T0F9 858 aaKnown RBP20.78■□□□□ 0.92
TRIM50-203ENST00000488217 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
TRIM50-203ENST00000488217 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
TRIM50-203ENST00000488217 TGFB2P61812 414 aa20.77■□□□□ 0.92
TRIM50-203ENST00000488217 DIAPH1O60610 1272 aaKnown RBP20.76■□□□□ 0.91
TRIM50-203ENST00000488217 HMOX1P09601 288 aa20.76■□□□□ 0.91
TRIM50-203ENST00000488217 GYS1P13807 737 aa20.76■□□□□ 0.91
TRIM50-203ENST00000488217 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
TRIM50-203ENST00000488217 CRKLP46109 303 aaKnown RBP20.75■□□□□ 0.91
TRIM50-203ENST00000488217 TAF1LQ8IZX4 1826 aa20.75■□□□□ 0.91
TRIM50-203ENST00000488217 CHD4Q14839 1912 aa20.74■□□□□ 0.91
TRIM50-203ENST00000488217 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
TRIM50-203ENST00000488217 SLC52A2Q9HAB3 445 aa20.74■□□□□ 0.91
TRIM50-203ENST00000488217 PARP3Q9Y6F1 533 aa20.74■□□□□ 0.91
TRIM50-203ENST00000488217 MTHFSDQ2M296 383 aaKnown RBP20.73■□□□□ 0.91
TRIM50-203ENST00000488217 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
TRIM50-203ENST00000488217 CCDC87Q9NVE4 849 aa20.73■□□□□ 0.91
TRIM50-203ENST00000488217 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
TRIM50-203ENST00000488217 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
TRIM50-203ENST00000488217 UBR3Q6ZT12 1888 aa20.7■□□□□ 0.9
TRIM50-203ENST00000488217 DPEP1P16444 411 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
TRIM50-203ENST00000488217 FKBP8Q14318 412 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
TRIM50-203ENST00000488217 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
TRIM50-203ENST00000488217 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
TRIM50-203ENST00000488217 ARHGAP27Q6ZUM4 889 aa20.67■□□□□ 0.9
TRIM50-203ENST00000488217 ZNF526Q8TF50 670 aaPredicted RBP20.67■□□□□ 0.9
TRIM50-203ENST00000488217 ZPR1O75312 459 aa20.66■□□□□ 0.9
TRIM50-203ENST00000488217 TM4SF1P30408 202 aa20.66■□□□□ 0.9
TRIM50-203ENST00000488217 USP42Q9H9J4 1324 aaKnown RBP20.66■□□□□ 0.9
TRIM50-203ENST00000488217 U2SURPO15042 1029 aaKnown RBP20.65■□□□□ 0.9
TRIM50-203ENST00000488217 FCHSD2O94868 740 aa20.65■□□□□ 0.9
TRIM50-203ENST00000488217 KCNA3P22001 575 aa20.65■□□□□ 0.9
TRIM50-203ENST00000488217 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
TRIM50-203ENST00000488217 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
TRIM50-203ENST00000488217 PIM2Q9P1W9 311 aa20.64■□□□□ 0.89
TRIM50-203ENST00000488217 DDR1Q08345 913 aa20.63■□□□□ 0.89
TRIM50-203ENST00000488217 PXDNLA1KZ92 1463 aa20.62■□□□□ 0.89
TRIM50-203ENST00000488217 ADCY9O60503 1353 aa20.62■□□□□ 0.89
TRIM50-203ENST00000488217 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
TRIM50-203ENST00000488217 IL17REQ8NFR9 667 aa20.62■□□□□ 0.89
TRIM50-203ENST00000488217 SOS1Q07889 1333 aaPredicted RBP20.61■□□□□ 0.89
TRIM50-203ENST00000488217 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
TRIM50-203ENST00000488217 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
TRIM50-203ENST00000488217 C10orf71Q711Q0 1435 aa20.61■□□□□ 0.89
TRIM50-203ENST00000488217 ZNF831Q5JPB2 1677 aa20.61■□□□□ 0.89
TRIM50-203ENST00000488217 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
TRIM50-203ENST00000488217 STARD3NLO95772 234 aa20.6■□□□□ 0.89
TRIM50-203ENST00000488217 DALRD3Q5D0E6 543 aaKnown RBP20.6■□□□□ 0.89
TRIM50-203ENST00000488217 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
TRIM50-203ENST00000488217 TTC5Q8N0Z6 440 aa20.59■□□□□ 0.89
TRIM50-203ENST00000488217 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
TRIM50-203ENST00000488217 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
TRIM50-203ENST00000488217 TEFQ10587 303 aa20.58■□□□□ 0.89
TRIM50-203ENST00000488217 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
TRIM50-203ENST00000488217 NFIXQ14938 502 aa20.57■□□□□ 0.88
TRIM50-203ENST00000488217 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
TRIM50-203ENST00000488217 TEX13AQ9BXU3 409 aaPredicted RBP20.57■□□□□ 0.88
TRIM50-203ENST00000488217 CHRNA5P30532 468 aa20.56■□□□□ 0.88
TRIM50-203ENST00000488217 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
TRIM50-203ENST00000488217 PHACTR3Q96KR7 559 aa20.56■□□□□ 0.88
TRIM50-203ENST00000488217 KIF3CO14782 793 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms